SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00170
Pre Gene Modal
BGIBMGA000610
Annotation
PREDICTED:_uncharacterized_protein_LOC106133963_[Amyelois_transitella]
Location in the cell
Cytoplasmic   Reliability : 1.499 PlasmaMembrane   Reliability : 1.231
 

Sequence

CDS
ATGAAACCACTATCGCTGGATGTTATTTCAAGATACCTTACTAAAAATGTTATAGCGGAAGTTTTTAAATTGAAGACAGACAGCGATGAAGACATAGAAAATATTGAATTAACAAAAGCAGCACCAAATGGCGAAGGTCTCCTCAGTGCAGTCTACAGGATCAAAGTTACAGGCAAGAGATATTCCACATCCTTTATCGGGAAGGGTTTCGTTGACAATGAACGCATCAAAAACTCTTTAAACTGTGCCGAACTATTCAGAAGAGAGGCATTGTTTTACTCTGATGTGCTACCTATACTAGTCGATTTGCAGCAATCGTTAGGTGCGAGCGAATGCATTCAGAACAGCGTGCCTATTTGTTATGGTTGTTATCTGGACGGCGTTAATGATTATATCGTTCTAGAAGATCTTGGCGAAAGTCGCTGTAAATCTTTAACGAAACACCCTACAAAGTGCGAACGGGATTCAGTTCTAGAGACACTAGCACATTTGCACGCAGTATCGATGACTTTGCGAATCAAGAAGCCCGATGAATTCAAAAGGATTGCCGATTTAATTCCAGAAGCGTACTATACTGAAAAAAATCGTGATTGGTATTCGAAATTTCAACACAAAGCTGTAATGATAGATCAAGCGATTTTAATTGAACACGAAGATCCATCGTCTGTTTACTATAAAAAATATAACGAGCTGCTCGGTCAAGACGTGTACGGGTGCTTGATCGAAATGACGACGACTCGTGGAGATTTCACTGTGATCAATCACGGAGACTCTTGGACTCCGAATTTTCTTCGTTCTAAAGGCAGAACTGTTGCGATTGATTTTCAGATGATACGATGCGCTTCGCCAGTTACGGATCTAATGCTTTTCTTGTTTATGTGCACAAACGTTTGCTCAAATGTCGAACAGTTTGAGGAAGCTCTCGACCATTATTATAATTTTTTAGATTATTTTTTGAAAGACATGGGCATGGACGTCGCAATTGTCTTCCCAAGAGACGCTTTCGAAAACGAACTCAAAATATACGGAAAGTTCGGATTTCTTACATGCCTGACGTCAATTCCGCTCTTAGCAAACGAGGGGACCAGTGCGTTACAATTGACAGAAGATTTTCCAGAACATAGTCGAATACCATTAGAAAAACTATGGGACATTTCACCTATCAAAAACGAGCAGTATCAGATGAGATTTGTGAACGCTTTAAGACTAGCTGTAGATGCGAATCTTATTTGA
Protein
MKPLSLDVISRYLTKNVIAEVFKLKTDSDEDIENIELTKAAPNGEGLLSAVYRIKVTGKRYSTSFIGKGFVDNERIKNSLNCAELFRREALFYSDVLPILVDLQQSLGASECIQNSVPICYGCYLDGVNDYIVLEDLGESRCKSLTKHPTKCERDSVLETLAHLHAVSMTLRIKKPDEFKRIADLIPEAYYTEKNRDWYSKFQHKAVMIDQAILIEHEDPSSVYYKKYNELLGQDVYGCLIEMTTTRGDFTVINHGDSWTPNFLRSKGRTVAIDFQMIRCASPVTDLMLFLFMCTNVCSNVEQFEEALDHYYNFLDYFLKDMGMDVAIVFPRDAFENELKIYGKFGFLTCLTSIPLLANEGTSALQLTEDFPEHSRIPLEKLWDISPIKNEQYQMRFVNALRLAVDANLI

Summary

Similarity
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
EMBL
BABH01006695    KZ149901    PZC78509.1    NWSH01001050    PCG72919.1    ODYU01003434    + More
SOQ42202.1    KQ461108    KPJ09204.1    JTDY01001461    KOB73811.1    KQ459594    KPI96182.1    AAAB01008879    EGK96978.1    NEVH01013215    PNF29697.1    APCN01002134    EAA08488.3    AXCN02000148    UFQT01000109    SSX20136.1    AXCM01004215    GBYB01000901    JAG70668.1    KQ459583    KPI98625.1    BABH01018468    NNAY01005152    OXU16941.1    AJWK01011468    GANO01004535    JAB55336.1    JRES01000348    KNC32029.1    KQ461103    KPJ09463.1    PYGN01000075    PSN55206.1    CP012528    ALC49638.1    GGFJ01005787    MBW54928.1    AGBW02013479    OWR43359.1    ATLV01026615    KE525415    KFB53212.1    ODYU01012709    SOQ59151.1    CH379064    EAL32036.1    KRT06790.1    KQ434783    KZC04967.1    GGFM01007670    MBW28421.1    KQ971338    EFA02417.1    ADMH02002074    ETN59546.1    CH479192    EDW26488.1    CH902635    EDV33769.1    GGFJ01005788    MBW54929.1    CH933810    EDW07140.2    CH940660    EDW58155.1    CH480850    EDW51357.1    CM000366    EDX17444.1    OUUW01000015    SPP88610.1    CH954180    EDV46334.1    KQS29935.1    KZ150238    PZC71946.1    CCAG010013058    KPI98624.1    GFDF01006232    JAV07852.1    GFDF01006231    JAV07853.1    GAKP01005078    JAC53874.1    UFQS01000550    UFQT01000550    SSX04802.1    SSX25165.1    GEZM01028014    GEZM01028013    JAV86515.1    AE014298    AY118900    AAF46408.1    AAM50760.1    KA645128    AFP59757.1    KQ981744    KYN36265.1    EFA02416.1    GDHF01006961    JAI45353.1    CM000162    EDX02219.1    KRK06644.1    ADTU01021631    CH916370    EDV99604.1    GDHF01012998    JAI39316.1    GBXI01004358    JAD09934.1    KQ976641    KYM78730.1    GL888273    EGI63534.1    CH477290    EAT44634.1    GAMC01010354    GAMC01010353    GAMC01010350    JAB96201.1    JXUM01087313    KQ563625    KXJ73581.1    GDHF01003392    JAI48922.1    GAPW01001613    JAC11985.1    KZ288201    PBC33566.1    KQ982383    KYQ56907.1    LBMM01013392    KMQ85660.1    CH963738    EDW72132.1    KQ980765    KYN13448.1    OXU16940.1    NNAY01004383    OXU17970.1    GEZM01028018    GEZM01028015    JAV86510.1    NWSH01001035    PCG72996.1    KQ435732    KOX77392.1    QOIP01000001    RLU26400.1   
Pfam
PF02958   EcKinase        + More
PF13202   EF-hand_5
PF13499   EF-hand_7
PF00225   Kinesin
PF00089   Trypsin
Interpro
IPR015897   CHK_kinase-like        + More
IPR011009   Kinase-like_dom_sf       
IPR004119   EcKinase-like       
IPR011992   EF-hand-dom_pair       
IPR002048   EF_hand_dom       
IPR039647   EF_hand_pair_protein_CML-like       
IPR018247   EF_Hand_1_Ca_BS       
IPR001752   Kinesin_motor_dom       
IPR036961   Kinesin_motor_dom_sf       
IPR027417   P-loop_NTPase       
IPR038105   Kif23_Arf-bd_sf       
IPR001254   Trypsin_dom       
IPR009003   Peptidase_S1_PA       
SUPFAM
SSF56112   SSF56112        + More
SSF47473   SSF47473       
SSF52540   SSF52540       
SSF50494   SSF50494       
Gene 3D

Ontologies

Topology

Length:
410
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.02744
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00190
outside
1  -  410
 
 

Population Genetic Test Statistics

Pi
14.867201
Theta
13.589377
Tajima's D
0.294245
CLR
0.0035
CSRT
0.463276836158192
Interpretation
Uncertain
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