SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00168
Pre Gene Modal
BGIBMGA000608
Annotation
uncharacterized_protein_LOC101741444_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 2.655
 

Sequence

CDS
ATGATACGGAACAAGAAGCCACCATTCTCTATGAATCGTTTTACGGGAATGCTGATGGTTGGTTATTCCTGGGGTCAAATGATGATGGTAGCAGTGCCATCTGATGAAATATGGGGTATCAATTTTAGATATCTCAACTACCTCATTCCTTTGGTTGCTGCACTAGGTGTCTGGACAGTAGGCAACATTGGTCACGAGCAAGGAACCTTGAAGTGGCCTCTCTTAGCTGCATATGTGTCCTATCCTCTTCGCTACTTTATATATGATGAAACAGTATTTTTCACTATCATGGTGTTGTCTGCAGCATTAGCATTTGACTCCTTCTCAAAGCAGTGGCGCAGAACTCCAAGAAGGCATCGTTTTGTTAAGAGAGTGATTGTCCTCGGTGTGTGTGCTTGCCTTTACTTATCCCTATGGTGTAGCTACTTGTACTTCAATGGCACGATCACTGACAGTGAAGGCGACGAGGTTCCAATCTACGAAGCATTGCATCACTTCTTTACAAGTCCTTGGTGGCTTGATGTGAAGCAGTGCCTTATTGATACATACCAGTATGCACAGCATCATGGCTGGTATGAAGTGTGGAAACAAATTATTGATCTGTCTGATCCTCATGGTGAACAAAACGCATACAAGGTGCTCGGGCTGGGCCCTGAAGCTACACAACAAGAGATAACTTCTACTTGGCGAAGATTGTCCAGAGAGCATCATCCCGACAAAGTCAAGGATGAGAACGGACGCCGCGCTGCCCAAGAACGATTCATGGAAATACAACAAGCTTACGAGATCTTGTCCAATAGCAAGCACAGAAGAAATCGACGCAATAAGAAAGATAACTCGGAGTAA
Protein
MIRNKKPPFSMNRFTGMLMVGYSWGQMMMVAVPSDEIWGINFRYLNYLIPLVAALGVWTVGNIGHEQGTLKWPLLAAYVSYPLRYFIYDETVFFTIMVLSAALAFDSFSKQWRRTPRRHRFVKRVIVLGVCACLYLSLWCSYLYFNGTITDSEGDEVPIYEALHHFFTSPWWLDVKQCLIDTYQYAQHHGWYEVWKQIIDLSDPHGEQNAYKVLGLGPEATQQEITSTWRRLSREHHPDKVKDENGRRAAQERFMEIQQAYEILSNSKHRRNRRNKKDNSE

Summary

EMBL
BABH01006694    JN872893    AFC01232.1    KQ459594    KPI96185.1    KQ461108    + More
KPJ09201.1    NWSH01001220    PCG72076.1    AGBW02007654    OWR54878.1    ODYU01003434    SOQ42198.1    KQ971321    EFA00002.1    GEZM01026388    JAV87021.1    CVRI01000057    CRL01978.1    APGK01042608    KB741007    ENN75609.1    KK852542    KDR21704.1    JXUM01066602    KQ562407    KXJ75980.1    DS235851    EEB18743.1    JXUM01080377    KQ563182    KXJ74320.1    PYGN01000208    PSN51196.1    UFQT01000075    SSX19404.1    UFQT01000299    SSX22969.1    KB632182    ERL89616.1    DQ440027    CH477755    ABF18060.1    EAT36586.1    CH477627    EAT38114.1    GANO01000130    JAB59741.1    AXCN02000433    GGFL01005338    MBW69516.1    GGFJ01005895    MBW55036.1    GGFM01006403    MBW27154.1    GGFM01000203    MBW20954.1    GGFL01005339    MBW69517.1    GFDF01004291    JAV09793.1    GGFK01000789    MBW34110.1    GGFM01000199    MBW20950.1    ATLV01023228    KE525341    KFB48661.1    GGFK01000506    MBW33827.1    DS233012    EDS27507.1    APCN01000169    GFDL01009371    JAV25674.1    AAAB01008807    EAA04160.5    AXCM01004012    CCAG010021563    JRES01001003    KNC26211.1    GL888128    EGI66770.1    JXJN01022848    KQ978957    KYN26954.1    CH964291    EDW86509.1    KQ976488    KYM83567.1    GAMC01000746    JAC05810.1    KZ288187    PBC34713.1    KQ982320    KYQ57776.1    GBXI01014009    GBXI01008753    JAD00283.1    JAD05539.1    GDHF01028918    GDHF01027850    JAI23396.1    JAI24464.1    GFXV01000814    MBW12619.1    KK107111    QOIP01000011    EZA58930.1    RLU16944.1    KQ434783    KZC04778.1    GBGD01001974    JAC86915.1    GAKP01012855    JAC46097.1    KQ981866    KYN34125.1    GECL01001968    JAP04156.1    GDKW01002703    JAI53892.1    KQ978501    KYM93465.1    GGMR01014490    MBY27109.1    KQ414758    KOC61507.1    AE014298    AY058516    AAF48683.1    AAL13745.1    AHN59825.1    GGMS01009898    MBY79101.1    GL764272    EFZ18014.1    ABLF02024672    CH954180    EDV46441.1    ACPB03016783    GL450824    EFN80403.1    CP012528    ALC49195.1    CH902640    EDV38321.1    CH933810    EDW06770.1    KRF93810.1    KRF93811.1    GL442330    EFN63568.1    CM000162    EDX02549.1    CH940651    EDW65554.1    CH916371    EDV92147.1    NNAY01002105    OXU22070.1    AJVK01034775   
Pfam
PF00226   DnaJ        + More
PF05154   TM2
PF02872   5_nucleotid_C
PF00149   Metallophos
PF00089   Trypsin
Interpro
IPR036869   J_dom_sf        + More
IPR001623   DnaJ_domain       
IPR007829   TM2       
IPR006179   5_nucleotidase/apyrase       
IPR029052   Metallo-depent_PP-like       
IPR008334   5'-Nucleotdase_C       
IPR004843   Calcineurin-like_PHP_ApaH       
IPR036907   5'-Nucleotdase_C_sf       
IPR006146   5'-Nucleotdase_CS       
IPR033116   TRYPSIN_SER       
IPR018114   TRYPSIN_HIS       
IPR001254   Trypsin_dom       
IPR009003   Peptidase_S1_PA       
SUPFAM
SSF46565   SSF46565        + More
SSF55816   SSF55816       
SSF50494   SSF50494       
Gene 3D
PDB
2CUG     E-value=1.43579e-07,     Score=131

Ontologies

Topology

Length:
281
Number of predicted TMHs:
4
Exp number of AAs in TMHs:
78.4129400000001
Exp number, first 60 AAs:
32.21606
Total prob of N-in:
0.30675
POSSIBLE N-term signal
sequence
outside
1  -  14
TMhelix
15  -  32
inside
33  -  43
TMhelix
44  -  63
outside
64  -  82
TMhelix
83  -  105
inside
106  -  124
TMhelix
125  -  147
outside
148  -  281
 
 

Population Genetic Test Statistics

Pi
17.729411
Theta
16.649943
Tajima's D
0.392899
CLR
0.538248
CSRT
0.486675666216689
Interpretation
Uncertain
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