Gene

KWMTBOMO00158  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA001990

Annotation

PREDICTED:_rho_GTPase-activating_protein_1-like_[Amyelois_transitella]

Location

Bomo_Chr1(-):4995666-5012076      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.572 Nuclear   Reliability : 1.238

CDS

ATGTTCACACTTGATAAATACGTTGAACAAGATTACAGTGTTGTATATTTTCATTACGGCCTAAATAGCAAGAATAAACCACCTCTCTCGTGGTTGTGGAAAGCTTACAAGGCATTTGACAGGAAATATAAGAAAAATCTGAAAGCTCTGTATCTTGTGCACCCAACAAACGTTATACGTGTCGTATGGCAAATGTTGAGGCCCGCAATAAGTGTGAAATTCGGAAGGAAAATGATGTACTTGAACTATTTACATGAGTTACACCAGTATATAAGTTTGGAAAAACTTTGTATTCCTGATTCTGTACTTCAATACGACAAAACGTTACTGTCGAAAAGTCCCCGAGCTGCCGAGATTGCTCAGAAGGTACTTGGCCGTTTCCTGGGCTCGTCTTCGAGTGCTAAAGATGATCAGGGCGAGAAGACCCCACGACCGAAAACCCAGCAGTTCGGTGTCTCCCTCCAATTTATCAGGGCCAACAACACCAATGTAATCGACGGTATACCACCTATCGTTCGTCAGTGCGTTGAATTCCTGTCGCGGCCTGACGCCCTGGAGACCGAGGGCATTTTCAGACGGTCTGCGAACATGGTGACAGTTAAGCAGCTACAGAATAGCTGCAACCAAGGCGAGCCAATCTCGTTTCGCGATGACCCCCATATCGCGGCCGTTCTACTCAAGACCTTCCTGCGTGATCTCGAGGAGCCCGTGTTGACCTACGACCTGTACGAGGAAATCCTCAAATTTCAATCGTGGCCTAACGCAGAGAAGCCGCGCAATGTGAAGATACTGATCCTGGAAAGACTTCCGATTGAGAACTACAAGCTGTTGAAATACTTGTTCCAGTTTCTGTGGAAGGTAAAGGATCGAAGCTGTCTGAACAAGATGACCTGCAGCAACCTGGCCGTGGTGTTCGGTCCCAACCTGGCCTGGCCCCCCAGCGGCCAAATGTCCCTGCAAGCGATCGCGCCAATCAACGCTTTCACCGACTTCACCCTGGAGAACCAAGAGTCGATCTTCATCATCTAA

Protein

MFTLDKYVEQDYSVVYFHYGLNSKNKPPLSWLWKAYKAFDRKYKKNLKALYLVHPTNVIRVVWQMLRPAISVKFGRKMMYLNYLHELHQYISLEKLCIPDSVLQYDKTLLSKSPRAAEIAQKVLGRFLGSSSSAKDDQGEKTPRPKTQQFGVSLQFIRANNTNVIDGIPPIVRQCVEFLSRPDALETEGIFRRSANMVTVKQLQNSCNQGEPISFRDDPHIAAVLLKTFLRDLEEPVLTYDLYEEILKFQSWPNAEKPRNVKILILERLPIENYKLLKYLFQFLWKVKDRSCLNKMTCSNLAVVFGPNLAWPPSGQMSLQAIAPINAFTDFTLENQESIFII

Uniprot

A0A1E1WHS1   A0A212FHK4   A0A2H1W0A3   A0A2A4K3V3   A0A194QZW3   A0A194Q6G4   + More
A0A2J7QEH8   A0A2J7QEJ5   A0A067RCZ5   A0A0P4VJA5   A0A088A5N3   A0A0C9R0K1   A0A023FAF7   R4FLC9   A0A069DUV4   A0A0V0GA13   A0A0L7R9N4   A0A2S2QJP1   E2BNQ8   A0A1B6I978   A0A151I989   A0A151WHP6   A0A195AYU4   A0A195F6L2   E9JCX5   A0A151IUG8   A0A1B6HD14   K7IW39   A0A1B6M4M7   A0A310S873   F4WSZ2   A0A2S2NK08   A0A0N0BEH2   A0A154PJS1   A0A2H8TXV6   J9JR72   A0A026W0R3   A0A0J7KMD4   A0A0A9YXV0   A0A146M8A5   A0A0K8T5R1   A0A1S3DAI1   A0A226ES27   E1ZVU3   A0A1W4WEA3   A0A1Y1LRT2   E0VEE4   A0A0P5BVM8   A0A0P5T3B5   A0A0P6HQW0   I4DPC6   E9HTS0   D6WDQ3   A0A0L7LTM3   A0A0P4W173   A0A0P4W9A5   A0A0P4W791   A0A0N7ZBN5   A0A0P4WCR9   T1JB81   A0A1B6DM53   A0A1B6G8R2   A0A0P5DTE4   U4U560   T1JQ76   A0A1E1X4B3   V5H097   A0A2R7VPR6   A0A0N7ZTE0   N6T5V9   L7M0V7   A0A1E1XJG1   A0A2R5L4H9   A0A1Z5LF57   A0A293MXA4   W5JR66   T1DLH4   U5EUL4   A0A2M3Z149   A0A2M4BLV2   A0A182FG55   A0A2M4A5Y7   A0A2M4CUG8   A0A1Q3F7M8   A0A182KD13   A0A023ET32   A0A0K8TRX3   A0A182IRU0   A0A182TTY6   Q16WV5   A0A182WJL2   A0A1J1HQK3   B0W3T1   A0A182P209   T1PDG6   A0A182XYI7   A0A182RTZ5   A0A182QBB0   A0A084VQQ8  

Pubmed

22118469    26354079    24845553    27129103    25474469    26334808    + More
20798317    21282665    20075255    21719571    24508170    30249741    25401762    26823975    28004739    20566863    22651552    21292972    18362917    19820115    26227816    23537049    28503490    25765539    25576852    29209593    28528879    20920257    23761445    24945155    26369729    17510324    25244985    24438588   

EMBL

GDQN01004509    JAT86545.1    AGBW02008503    OWR53197.1    ODYU01005564    SOQ46535.1    + More
NWSH01000159    PCG78941.1    KQ461108    KPJ09131.1    KQ459463    KPJ00595.1    NEVH01015312    PNF26992.1    PNF26991.1    KK852542    KDR21731.1    GDKW01001544    JAI55051.1    GBYB01000359    GBYB01000361    JAG70126.1    JAG70128.1    GBBI01000794    JAC17918.1    ACPB03000235    GAHY01001468    JAA76042.1    GBGD01001288    JAC87601.1    GECL01001243    JAP04881.1    KQ414627    KOC67466.1    GGMS01008725    MBY77928.1    GL449444    EFN82667.1    GECU01024228    JAS83478.1    KQ978296    KYM95366.1    KQ983113    KYQ47344.1    KQ976701    KYM77212.1    KQ981768    KYN36021.1    GL771866    EFZ09203.1    KQ980963    KYN11021.1    GECU01035133    JAS72573.1    GEBQ01009119    JAT30858.1    KQ769940    OAD52738.1    GL888331    EGI62696.1    GGMR01004477    MBY17096.1    KQ435828    KOX71884.1    KQ434938    KZC12109.1    GFXV01007272    MBW19077.1    ABLF02035740    ABLF02035742    KK107579    QOIP01000004    EZA48654.1    RLU23559.1    LBMM01005512    KMQ91457.1    GBHO01031343    GBHO01005762    JAG12261.1    JAG37842.1    GDHC01002641    JAQ15988.1    GBRD01005065    JAG60756.1    LNIX01000002    OXA60018.1    GL434640    EFN74694.1    GEZM01050566    JAV75548.1    DS235090    EEB11750.1    GDIP01179980    JAJ43422.1    GDIP01136134    LRGB01000024    JAL67580.1    KZS21436.1    GDIQ01015503    JAN79234.1    AK403528    BAM19766.1    GL732783    EFX64852.1    KQ971322    EEZ99936.1    JTDY01000149    KOB78586.1    GDRN01080759    JAI62142.1    GDRN01080758    JAI62143.1    GDRN01080760    JAI62141.1    GDRN01080757    JAI62144.1    GDRN01080761    JAI62140.1    JH432010    GEDC01025180    GEDC01023326    GEDC01010537    JAS12118.1    JAS13972.1    JAS26761.1    GECZ01010965    JAS58804.1    GDIP01150901    JAJ72501.1    KB631957    ERL87458.1    CAEY01000437    GFAC01005317    JAT93871.1    GANP01008098    JAB76370.1    KK854006    PTY09128.1    GDIP01214417    JAJ08985.1    APGK01043064    APGK01043065    KB741011    ENN75564.1    GACK01008266    JAA56768.1    GFAA01003992    JAT99442.1    GGLE01000272    MBY04398.1    GFJQ02000941    JAW06029.1    GFWV01020746    MAA45474.1    ADMH02000578    ETN65798.1    GAMD01000431    JAB01160.1    GANO01001418    JAB58453.1    GGFM01001501    MBW22252.1    GGFJ01004871    MBW54012.1    GGFK01002896    MBW36217.1    GGFL01004785    MBW68963.1    GFDL01011480    JAV23565.1    GAPW01001133    JAC12465.1    GDAI01000687    JAI16916.1    CH477553    EAT39092.1    CVRI01000018    CRK90344.1    DS231833    EDS32229.1    KA646832    AFP61461.1    AXCN02000551    ATLV01015292    KE525006    KFB40302.1   

Proteomes

UP000007151    UP000218220    UP000053240    UP000053268    UP000235965    UP000027135    + More
UP000005203    UP000015103    UP000053825    UP000008237    UP000078542    UP000075809    UP000078540    UP000078541    UP000078492    UP000002358    UP000007755    UP000053105    UP000076502    UP000007819    UP000053097    UP000279307    UP000036403    UP000079169    UP000198287    UP000000311    UP000192223    UP000009046    UP000076858    UP000000305    UP000007266    UP000037510    UP000030742    UP000015104    UP000019118    UP000000673    UP000069272    UP000075881    UP000075880    UP000075902    UP000008820    UP000075920    UP000183832    UP000002320    UP000075885    UP000076408    UP000075900    UP000075886    UP000030765   

Pfam

PF13716   CRAL_TRIO_2        + More
PF00620   RhoGAP

Interpro

IPR036865   CRAL-TRIO_dom_sf        + More
IPR000198   RhoGAP_dom       
IPR008936   Rho_GTPase_activation_prot       
IPR001251   CRAL-TRIO_dom       

SUPFAM

SSF52087   SSF52087        + More
SSF48350   SSF48350       

Gene 3D

1.10.555.10     3.40.525.10    

CDD

cd00170  SEC14

ProteinModelPortal

A0A1E1WHS1   A0A212FHK4   A0A2H1W0A3   A0A2A4K3V3   A0A194QZW3   A0A194Q6G4   + More
A0A2J7QEH8   A0A2J7QEJ5   A0A067RCZ5   A0A0P4VJA5   A0A088A5N3   A0A0C9R0K1   A0A023FAF7   R4FLC9   A0A069DUV4   A0A0V0GA13   A0A0L7R9N4   A0A2S2QJP1   E2BNQ8   A0A1B6I978   A0A151I989   A0A151WHP6   A0A195AYU4   A0A195F6L2   E9JCX5   A0A151IUG8   A0A1B6HD14   K7IW39   A0A1B6M4M7   A0A310S873   F4WSZ2   A0A2S2NK08   A0A0N0BEH2   A0A154PJS1   A0A2H8TXV6   J9JR72   A0A026W0R3   A0A0J7KMD4   A0A0A9YXV0   A0A146M8A5   A0A0K8T5R1   A0A1S3DAI1   A0A226ES27   E1ZVU3   A0A1W4WEA3   A0A1Y1LRT2   E0VEE4   A0A0P5BVM8   A0A0P5T3B5   A0A0P6HQW0   I4DPC6   E9HTS0   D6WDQ3   A0A0L7LTM3   A0A0P4W173   A0A0P4W9A5   A0A0P4W791   A0A0N7ZBN5   A0A0P4WCR9   T1JB81   A0A1B6DM53   A0A1B6G8R2   A0A0P5DTE4   U4U560   T1JQ76   A0A1E1X4B3   V5H097   A0A2R7VPR6   A0A0N7ZTE0   N6T5V9   L7M0V7   A0A1E1XJG1   A0A2R5L4H9   A0A1Z5LF57   A0A293MXA4   W5JR66   T1DLH4   U5EUL4   A0A2M3Z149   A0A2M4BLV2   A0A182FG55   A0A2M4A5Y7   A0A2M4CUG8   A0A1Q3F7M8   A0A182KD13   A0A023ET32   A0A0K8TRX3   A0A182IRU0   A0A182TTY6   Q16WV5   A0A182WJL2   A0A1J1HQK3   B0W3T1   A0A182P209   T1PDG6   A0A182XYI7   A0A182RTZ5   A0A182QBB0   A0A084VQQ8  

PDB

6R3V     E-value=8.85154e-74,     Score=703

KEGG

101746164    K18470 Rho GTPase-activating protein 1 | (RefSeq) rho GTPase-activating protein 8

GO

GO:0007165   GO:0008270   GO:0016020   GO:0043565   GO:0043401   GO:0003677   GO:0003707   GO:0007169   GO:0016021  

Length:

342

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.20865

Exp number, first 60 AAs:

0.71617

Total prob of N-in:

0.07407

outside

1  -  342

 

 

Pi

5.064121

Theta

17.914341

Tajima's D

-1.181514

CLR

0.078281

CSRT

0.106594670266487

Interpretation

Uncertain