SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00157
Pre Gene Modal
BGIBMGA001994
Annotation
PREDICTED:_PHD_finger_protein_rhinoceros-like_isoform_X1_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.014
 

Sequence

CDS
ATGAGAGGCACAAAAAGGGCGACAGTGACGCGCGGCGAAGAGCCCAGCACGTCTAAGCGCCGCAGGATGGAACCAGAGGATCCTCTCTGGCAGCTACGTCCTGTCAGTGACCTCAAGATGTCATCAATATATAATAGAAGTGCCTCGGAGGCACCTGCAGAATTATTCAGAAAAGACCTAATCAGCGCGATGAAGTTGCCTGACAATGAGCCGTTGACGCCGAGCGAGTACTGGATCATCACTGATACTTGGAAACAAGACTGGGAGAGAGGCGTGCAGGTCCCCGTCAACCCTGACTCTCTACCGGCACCAAAAGTCAAGATCATTGAGAATCCACGTTCTCCAAACTTCCAAGAATTTCATTTGCCTAAAGACAAATACATACATTTAACACGGGATGTGAACTACCAATCCGATAAACACATTTTGAGCACAACGCCGGCTCGCGCAGAGGCAGCCTGCAGCTATGATTTAGACGCCACCGACATAGCTTGGCTGAAGCTGCTCAATTCCGAACGAGCCAGAGCTGGAGCCGCCCCCATCAACGAAGACCAGCTCGAGAAAGTAATTGAAGAGTTAGAGATTCGAACATGGGACAAAATTCAAGCTATAATGAAGTCTGAAGAGGGCCTCGGTATCGAGTACGACGAGAATGTAATTTGTGACGTGTGCCGATCGCCGGACTCTGAAGATGGAAATGAAATGGTGTTCTGCGACTCTTGTAATATTTGCGTTCACCAGGCTTGTTATGGCATAACTGTTATCCCCGACGGTCAGTGGCTGTGTCGACCGTGCGGCGACGGTGTAAGACCTGTCTGTGTTCTGTGCCCTAACCTCGGTGGTGCCATGAAATGTACTCCACTCGGGCGGAAGTGGGCACACGTCAGCTGCGTCTTATGGATTCCAGAGGTGTCTATCGGTTGTGCTGAAAAAATGGAACCTATTACAAAAATATCTGCTATACCCGCGTCCCGATGGTCGCTCGTATGTGTTCTTTGCCGCGAACGTAAAGGGGCTTGTATTCAATGTTCTGTTAAAACTTGCAAAACAGCTTATCATGTTACTTGTGCGTTTAAACATGGTTTAGAAATGCGTGCGATAATTGAGGATGAAAATGCCGACGACGGCGTAAAGTTACGATCTTATTGTCAGAGGCATAGTGTTAATTCGAAAAAAGAAAAATGTCCAGGTTCAGGTTCAGAAGAGGAGGAGGTTAAAAGGAAACGCCGTAAAGATATGACTTCAGAGGAAAAAACTCAAGCTCGTGCCGCGCGATTGCAGGAGATAGAGCGGGAGTTTGACAAACACGTGAACGTAAAAGATATCAGTACGCATTTATTAGATGTTGATCAGGATGCTATTCATTATATTTACAACTACTGGAAATTAAAAAGGCGGGCGGGTCACAACCGTCCCCTTTTGCCACCTAAATCTGATGATAGTGAGCTCCTTACTCATAGACAGGAACAAGCCGACCTCGATAAAATGAAAATGTTTGTCCAGCTCAGGCAAGATCTTGAAAGGGTTCGTAATTTATGTTACATGGTTAGTAGGCGAGAAAAATTGTCTCGATCGTTTTTTCGTATGAGAGAACAAACATTTCATAAACAAATCTCACTTTTATCTTCTGGAACTGCTATTCCAGACCATGAATTGACAGCTATAATAGAAGCAAATCACGGTCCTTCAATATATGATCGACTTTATTCTCATCCCAATGCCCCTGATCATAAAAATGACTTTGACGAATTAATGGCGCGAATAGCTCCGCCTGAGTCGGGTGACGAGAAAAAAAAAGATCGCAATGGATTAGTTCGAAGTTCGAGAGCGGCAAATCCCTACAAGAAACACTATGTTAATGGATCGCGTCGAAGTGGTAGTATGTACAGTGGTCTCTCTAGTGAAGAAAGTGCACCAGAAACGAATAGAAGACATCGCGGCAGGACTGGTTCAAGTACTGATGAGGACGAAAAAAAACCTACTACTTCGCCAAAAAAAAAGATCTCTGCAAAATCGAAGAGTAAGAGATCTCCAAAAAAGCCTGAGAGAAAGAAGAAAAAAGTACCACAATCTAAAGCTTTTGTTGAAAGCAGCAGTGAGGATGAAACTATAGTAAAAACAAGTAAAATAAAAAAGGACAGAACTCGTAGTAAGACCCTACAACAAATGGAAAAGGAAATGACTGCAGGAAAGGTGGGACAGTCTGGTACTGACAGTGAAGATTTGATGCCAATGAGAACTACAAGAAACAATAAGTTTCCTTTAGATATCTATTCCGATAGTAGCGAGGATTTGGCACGTAACAAATCAGATTTCAAAGTTGCAGACAAAGTAAAGCTTGAAAAGTCTAGAAACGATAAAATAAAGACTGAGAAATCTCCCATTGTCAATGATTCACAACAATCACTTCCTCGAACTAAAGCAGCTATGAAGGAGTTTGTTCCTTCACAGTCTGAAAAAAAACTTAATGCAATTGAAGATGAAAAACCTGCCCCTAAAAAAAGAGGCAGAAAACCATCAAATAAAAACGAGAAGGATAAAAAAAACATCCCTAAACTTGAAGTGGATAGTCAAGTAAAAAATAGATTAAGTGTTAAGTATCTAAAGAAAAAGCACAATCCAACTGATTTGATAGTTCCCCAAAGACAAGCAGCAAAAAAAGCTTCAGAAAATATGCGTTCAACTGCTGCCGTTAAAAAAGAAGAACTACCACCGGAAAAACTTACCGAAGACTCAAAAAGCAAAATTAAGTTTAAAGACAAAGCAAAAGATAAAGAGATTAAAGAAGTCCCAGGTAAAATCAATAGAAAGAAATCTAAGGATGCCGAGAAAGAAACAATAGCATATGTTCCTCAAAGACAAGCAGCAAAGAAAGCTGCTGCACATATCAAAGGAGGACTTGGTAACAAGCAACCACTTCTTGAATCAGATAATGATAAAAAGAAAGATTTTGCACGACCTGAAACATCCAAAATATCACCCAAGAAAGAGGAAATAAAAGTTATTAGAGTGCCACTAAAACAAAGTTCTAGTTCTTCTTCAAACTCTAGTAGCAGCAGTTGTTCATCGTCTTCGAGCTCGGAAGAAGAACAAGAGAAACACGAAATTAAACCAATCTCCAAAGCGCCAGAAATAAAACCTGCTATTAGAAAACCTTCTATGTTTTCACCTCAACCAACTACTAGACCGACAGTGGACTTGCCCTTTCTTGACAAGGTGTCCAAGCCGTTGTCTTCAACGAGTGCTTCGAGTGATACCGACAGTTCAAGGGACTACAACAGATCAGGATCTGAAAGTCCCACTCCAAGAAGACCAAGACGAAGAAGGAAGGGGAAAAGTATTTCAACTGATGCGTCCCCACGCAAGACCCTTGACAAGAAGCTTAAAACTTCCGAACGGGGGTTCGAGTGTAGGGTACCATCACCGTCTGTTGAAAGAGCGGAATCAATCCGAACCAACAACGCGCGTGCTGCCTCACGTGCTCGGACCAGAAGCATTACTGCAAGCGGAAATTTGTTTGATAAGCCTGATGCCGGATCTAGAAAACCATCCAAAGACGACCCAGAACCTACCCTTGGACCAGATAAATCTACGAAAGAGAGCAACCAGTCCTGTGAACTTCCGGCTTCGGAGTGGAAAGCGAACGAGGAAATAAAGCAAGAGATAAAAGTAGAAGTAACAAATTGTGATGAACCAGTCAAAAGCGAAGTTACAATAAAGCCTTTGACAAAAATGCAACCTACCTTAAGTGAAGAAAAAGTTGAACCACCTGAACCACAGCAAATGAATGAGGCTAGTCCTAAAAAGAATGCTGATTTAAAACAGAAATCTTTAACAAGTAGGCGTATGAGTGTAAAGGAACCAGTAACTGTTAAAGAGATTAAACTGCTGCCAGAAGAAATACGTCATCCCGTAACTAAAGAACGTAGAATGAGTAAACATGAAGTTAATGCCGTAGGAGAGCGTAGTCATTTGTCACCGATAAAAAAGCCTGTTTCTATTGAGAAGGTAGTTCAAATGTTGCCTGAAAAGAAAAGCCCAATTCCAATCAACGATGCATACACCGATAATGATAAAGATTGGTTACCAAAAGCACCCAGTCCAGTTGCGCTTCCAACGCCGGTTGAAAAACCCGGAGGACACGAAAAATATATGACCGAAGACAAGTCGCTAGACTCTGACTCTGCAGACAAAAGCAGTGTTAAAATGATTGCCAAAATCCAAGCGAATTTAAATGAAAACACTATGATAAAATCTCCAAAAACTCCTATGGATGCTAGGACAGCTACATTGGATTCATTAGATGTTGATCATGCTATGATAAGAAACATTAGAAAGCGTTCCATATTAGACCCGGAAAGAAAATTTATAGCTCAAGATGCTAGTCACGTCCAAGGAGTTGAGATATCGAAAAGTGCGAAGATTCCATCGGCCGTAAATCCTAATAGGTCAATGTTTTCGCCGCAACCAAAAGAAAATGACTTTGATTATGAAATGGTGGCAATTGATGATGGCTTTAATCACGATGATATTATGAAAAGATTCGGTACCTACCCCGAATTTTTATTTAAAGAAGATACAAAAGAACAAGGTGTGCAGGAGACCCTTAATCTAGTTGACAGACTGAGAATGCAACTCATATCGAAGAAAAACACTGTCGAGGTTTCTGCACAAGGAGAACCGTTCATAGAAGCAAAAGATGAAAAGCCCGAAGACTTAAAAACTATTAAAAGAGATTACGATCAAGAACCGGTACAAGAGAAAGAAGAAGCATTAGATTTGCATAACGCTAGAGATCTTACAAAAGAAGCTTGTCACCCTGTGAATCATAAACCGCATCCTATACCACACACCGACTTGGCTAGGGATAACAGGGAACACAAGTATGACACAAAAGATTACGATCGTCCTATAGCAATGACTAGCGGTGATAAATGGTCAGCCGGTCCCGTTGCTATGACGATACCGCACGATCGTGATCCCGATCATGGTCATGATCGTGAATTACATGCTGTTCGAGGTAATGACCAAAAATATGATCATATACCTTATAACGATGAAATGAAAGAACCTCCGACGGTTCAATCGGACATACAATCCCTGTCCGAAACTGGTGACACAATATCTGTGTGTAAACATAGTGATGATTCCCAGTCGATTTCTGTTGTGGACCACTCTGTTAACAGCAACGATAATGACCTAACCCAGGACAATCAAAATTATGATAATAATAATTCTTTGATACATTCTGATTGCGCTACAATCTCATCGCCGTATGTAAGTCAGGATAAGTGGAGAGAAAGCAAGATTACCACCAGGCGATCTTCTGCTTCGAGCACTAATTCGGACGCATCCATTTGCTCTCAAAAAGCTGCTTTAAAATCACATTTGAGTGCATGTGAAATATCTGCTCGTCAAGTTACTATAATGCCTGAAATTGATTCATATCCGCCGGTCCCAGCCTATTCATGTACCGTGGAACCATCAATGCCCTTAAATCAGTATTCTGCTTACCCTCCGAATGCTTCACCTTATTTAGGTACATTATCGTTACCATTATTTGGGAATCCAGCCTCGCAGCTACCATTGCCTTCGCCCGGACCTCTTTATAGTGGATTGCCATATTCAACCACTCCTTTAATGCCTCCAAAACCTTCGTTTACAATGTGTGCAGCGTTTACATCCTCTTCTCAAAATATGGCTCTTACCACAGCAATGATAGCTTCACCTACACCAAAAGGTTCCGAGTCACCACGTGATGAAATCGATGTTACGGGTAGTGACAAATTTACCATACATGTAGCGAGTAGTCCAAGTATCAGCGTTGATTCTTACGAAGCTAGCAATAAGGCTCCACCTACTAAAATGTCTAATGATAGTCATGACAGTATTGTAAGTATAAATCATGAATCAAAATCTCCATCAAAAACGAAACCAGTTACGAAGTTTCCTGGGAAGTCACCAGGGAAAAGTCCTGGATTTTCACCTAAACAAAGTGATACGTCAAAGGGAACTAAAAGATCGACTAACAGAAGTAATAGGAACCAACGTGGTCGAGGACGTTCTAAGAGTAGAGGTCATGCCTACCCCCCTGTTGATTATTCAGGAAACTCAATTCAAAGTAAATTAGTAGGAACAGTATATGACTTTCATGAAGAAATTGCCAATGATAGTGTTGATCTAAAAGCTTTACGAGAAAGACGAAAATCAGTAGATTTATGTAAATCCGTTGATGATAGGAAACCTGATCTATCTTATAAGGACGTGTCTCGGTCGCCTACCGCTGTATCTTCTTCGCCTACTACAAAAATGCCTAATATTAACGATACAAAAGAAATAAAACCTCCAACTTCTGAGCCTGACGAAAAACCTACTTCTCCTTCTGAGAACGATGCTTCTGAAGATGGTCCTGGCTTTTCACGCGTTCATGCGGTATTGCCAGGTCCAGTTGACATGAGAACGTACCAGTCCGTCGAGAAACCAGTTCCTGCTGCTGCAGACCAATGTCATTTGCTAGCTTTTGCGAGCGGCACAGCGGATCAGCATTTGCCTGAAATAGACGAAGAAGTGGAAAAAGAACTGCACTCAGCGTTAATGGCGAGCAAGCCTGGGGAACATTCACCGCCGCAACCTAATATCGCGCTTGAACACAATGTCGTACCCAAACAAATTTATACTCCTCAGCATCCGAAAGTTTCGCTTTCAGATTCGCGAAACCAATTGAAAGTAAAAATAAAAGGACCATTTTTGGATGCTAATTACGCAACAAGTCACAGTCAGCCCCAGGTTGCTCCCCCCACACCGGCGCCCGTACTCGATACCAGCACAAATGTTGTGAACACGATTGGAATATCGGCTTCCACTATGATGACTGGTTCGACGAATTTGAGACGTATGAGAAAGAAGGAACTATTGCGTCAATATTGGACGCAAGACATGAATATGGACGATCCGGCTGCTACATCTGCGATGACGTTACCACCGCCTGCCGTTCCATCGCCCCTCACGAGGGCTGTAATCACAATACCTAAAGCTGTTGCGTCGATGACCAGTATACCGACGCGAGAAGACTATAAAATTGCGGAAACACCCGCGGAAAAGAAAAAGCGAAAGGTCTCAAGTGGCCTTTCTCGCGAATTACGTCATTTGGAGGTGAGCATGAACGATGACGTTGATCCGTCAGACGATATTAAGTTGTCTTCTATGGCTAGTTCCTCCAATCAAGCGCACAAGAGAAGAGGACGTGCTACGACTAAGCCAAATAAAACTACAGCCTCACAGATCGCTCCGAAACTTAAAATCAAAATCGGTGCCAACATAGTACAACAAGTTAACGACGAAACAACCGGCGACCAGTTTCGCCCTCCGAAAAAACGGTCGATACACAAAACTTGCTTAGAAGACATTCGACGGGAGAACATGAAGTTCCGTCGAAAGGTCATGGCCGATTTCGAAGAAACGGAAAAGGCCAAGAAATACAAGCCGAGCAAAAGTGAGAAACGTAAAAAGAAAAAGGACAAAAAATCTGAGAAACTTCAAGTGGTGAACAGTGAAAGTGAAAGTGCTACTAAATTAATAATAAAGATAAAGCGTAAAAAGGATGAGATTTCTAACGTGAACGCTTTGACCTTGGCGGGACCTAGCGGCGCCGTGTCGGTGGCGCCCGAACCGGTGCTCGATCCGTTCGGCTACGACCCGACCGCGCCAGACCCGCTCGCCATCGACACGCCCTCGTACATAGAGGCGAGCGCCGCCATGCGCAAAGTCCGCACCGCTAAGGTAACACCGATTCGATTAAAATTAGCGCGCAGCTCACAGGGCTCGGGCTACGTGATGAAGGAGGCTGTGGAGCCATCCGCCAATGAGCCCATGCCCGTTTCTATCAATAAACACTGTGAAGTGAGGTGA
Protein
MRGTKRATVTRGEEPSTSKRRRMEPEDPLWQLRPVSDLKMSSIYNRSASEAPAELFRKDLISAMKLPDNEPLTPSEYWIITDTWKQDWERGVQVPVNPDSLPAPKVKIIENPRSPNFQEFHLPKDKYIHLTRDVNYQSDKHILSTTPARAEAACSYDLDATDIAWLKLLNSERARAGAAPINEDQLEKVIEELEIRTWDKIQAIMKSEEGLGIEYDENVICDVCRSPDSEDGNEMVFCDSCNICVHQACYGITVIPDGQWLCRPCGDGVRPVCVLCPNLGGAMKCTPLGRKWAHVSCVLWIPEVSIGCAEKMEPITKISAIPASRWSLVCVLCRERKGACIQCSVKTCKTAYHVTCAFKHGLEMRAIIEDENADDGVKLRSYCQRHSVNSKKEKCPGSGSEEEEVKRKRRKDMTSEEKTQARAARLQEIEREFDKHVNVKDISTHLLDVDQDAIHYIYNYWKLKRRAGHNRPLLPPKSDDSELLTHRQEQADLDKMKMFVQLRQDLERVRNLCYMVSRREKLSRSFFRMREQTFHKQISLLSSGTAIPDHELTAIIEANHGPSIYDRLYSHPNAPDHKNDFDELMARIAPPESGDEKKKDRNGLVRSSRAANPYKKHYVNGSRRSGSMYSGLSSEESAPETNRRHRGRTGSSTDEDEKKPTTSPKKKISAKSKSKRSPKKPERKKKKVPQSKAFVESSSEDETIVKTSKIKKDRTRSKTLQQMEKEMTAGKVGQSGTDSEDLMPMRTTRNNKFPLDIYSDSSEDLARNKSDFKVADKVKLEKSRNDKIKTEKSPIVNDSQQSLPRTKAAMKEFVPSQSEKKLNAIEDEKPAPKKRGRKPSNKNEKDKKNIPKLEVDSQVKNRLSVKYLKKKHNPTDLIVPQRQAAKKASENMRSTAAVKKEELPPEKLTEDSKSKIKFKDKAKDKEIKEVPGKINRKKSKDAEKETIAYVPQRQAAKKAAAHIKGGLGNKQPLLESDNDKKKDFARPETSKISPKKEEIKVIRVPLKQSSSSSSNSSSSSCSSSSSSEEEQEKHEIKPISKAPEIKPAIRKPSMFSPQPTTRPTVDLPFLDKVSKPLSSTSASSDTDSSRDYNRSGSESPTPRRPRRRRKGKSISTDASPRKTLDKKLKTSERGFECRVPSPSVERAESIRTNNARAASRARTRSITASGNLFDKPDAGSRKPSKDDPEPTLGPDKSTKESNQSCELPASEWKANEEIKQEIKVEVTNCDEPVKSEVTIKPLTKMQPTLSEEKVEPPEPQQMNEASPKKNADLKQKSLTSRRMSVKEPVTVKEIKLLPEEIRHPVTKERRMSKHEVNAVGERSHLSPIKKPVSIEKVVQMLPEKKSPIPINDAYTDNDKDWLPKAPSPVALPTPVEKPGGHEKYMTEDKSLDSDSADKSSVKMIAKIQANLNENTMIKSPKTPMDARTATLDSLDVDHAMIRNIRKRSILDPERKFIAQDASHVQGVEISKSAKIPSAVNPNRSMFSPQPKENDFDYEMVAIDDGFNHDDIMKRFGTYPEFLFKEDTKEQGVQETLNLVDRLRMQLISKKNTVEVSAQGEPFIEAKDEKPEDLKTIKRDYDQEPVQEKEEALDLHNARDLTKEACHPVNHKPHPIPHTDLARDNREHKYDTKDYDRPIAMTSGDKWSAGPVAMTIPHDRDPDHGHDRELHAVRGNDQKYDHIPYNDEMKEPPTVQSDIQSLSETGDTISVCKHSDDSQSISVVDHSVNSNDNDLTQDNQNYDNNNSLIHSDCATISSPYVSQDKWRESKITTRRSSASSTNSDASICSQKAALKSHLSACEISARQVTIMPEIDSYPPVPAYSCTVEPSMPLNQYSAYPPNASPYLGTLSLPLFGNPASQLPLPSPGPLYSGLPYSTTPLMPPKPSFTMCAAFTSSSQNMALTTAMIASPTPKGSESPRDEIDVTGSDKFTIHVASSPSISVDSYEASNKAPPTKMSNDSHDSIVSINHESKSPSKTKPVTKFPGKSPGKSPGFSPKQSDTSKGTKRSTNRSNRNQRGRGRSKSRGHAYPPVDYSGNSIQSKLVGTVYDFHEEIANDSVDLKALRERRKSVDLCKSVDDRKPDLSYKDVSRSPTAVSSSPTTKMPNINDTKEIKPPTSEPDEKPTSPSENDASEDGPGFSRVHAVLPGPVDMRTYQSVEKPVPAAADQCHLLAFASGTADQHLPEIDEEVEKELHSALMASKPGEHSPPQPNIALEHNVVPKQIYTPQHPKVSLSDSRNQLKVKIKGPFLDANYATSHSQPQVAPPTPAPVLDTSTNVVNTIGISASTMMTGSTNLRRMRKKELLRQYWTQDMNMDDPAATSAMTLPPPAVPSPLTRAVITIPKAVASMTSIPTREDYKIAETPAEKKKRKVSSGLSRELRHLEVSMNDDVDPSDDIKLSSMASSSNQAHKRRGRATTKPNKTTASQIAPKLKIKIGANIVQQVNDETTGDQFRPPKKRSIHKTCLEDIRRENMKFRRKVMADFEETEKAKKYKPSKSEKRKKKKDKKSEKLQVVNSESESATKLIIKIKRKKDEISNVNALTLAGPSGAVSVAPEPVLDPFGYDPTAPDPLAIDTPSYIEASAAMRKVRTAKVTPIRLKLARSSQGSGYVMKEAVEPSANEPMPVSINKHCEVR

Summary

Pfam
PF10513   EPL1        + More
PF00628   PHD
Interpro
IPR034732   EPHD        + More
IPR019786   Zinc_finger_PHD-type_CS       
IPR019542   Enhancer_polycomb-like_N       
IPR013083   Znf_RING/FYVE/PHD       
IPR001965   Znf_PHD       
IPR019787   Znf_PHD-finger       
IPR011011   Znf_FYVE_PHD       
SUPFAM
SSF57903   SSF57903       
Gene 3D
PDB
5ERC     E-value=1.88591e-42,     Score=442

Ontologies

Topology

Length:
2635
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00581
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00010
outside
1  -  2635
 
 

Population Genetic Test Statistics

Pi
4.610538
Theta
17.734935
Tajima's D
-1.771377
CLR
0.028144
CSRT
0.0290985450727464
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号