SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00152
Pre Gene Modal
BGIBMGA001999
Annotation
PREDICTED:_ras-related_and_estrogen-regulated_growth_inhibitor_[Papilio_polytes]
Location in the cell
Cytoplasmic   Reliability : 1.145 Mitochondrial   Reliability : 1.095 Nuclear   Reliability : 1.281
 

Sequence

CDS
ATGTCCACGAGAGGGATAAGGCGGAAGAAGTCGTCGTTATCAGAAGTGAAAGTGGCGGTGATCGGTGCGCCCTCAGTCGGCAAAAGCGCGCTCACGGTTCGCTTCCTCACGAAGCGGTACATCGGGGAATACGACCATCAACAAGACAGCAAATACAAACACGAGGCGTTGCTAGACGGAGAACCCATACTTTTCGAAATATTAGACACATGTCCAAAGAGTCTAAATGAAATACCTGGGAACGAGATAGCACAATGGGCGGACGGTCTATTCTTGGTGTATTCAATCACGGACCGGGAGTCCTTTAACTACGTCCGGAGAGCCAAACAGAGCCTTCAACCGGAGATACCTCTGACCTTGGTCGGAAATAAAGCCGATATGGTACATCTGAGGCAGGTGAGTCCAGAAGAAGGGGAGATCCTAGCTAAAGATTTCGAGTGTAGCTTCGCAGAGGTGGCTGCTGCTGAGCAAGTCAATCAAGTTGGTGAAGTGTTCCACGAGCTTTGCCGTGAAGTCCTCACGCTCCGGCGAAGGGCCAAGCACAGTTTATTGGACAGAATGCTGGGTTCAAAGTCAGCGTGCAGAGTCTATTGTAGAGGCAAAAGCGACAGCGCTTTACCCAAAGACTAG
Protein
MSTRGIRRKKSSLSEVKVAVIGAPSVGKSALTVRFLTKRYIGEYDHQQDSKYKHEALLDGEPILFEILDTCPKSLNEIPGNEIAQWADGLFLVYSITDRESFNYVRRAKQSLQPEIPLTLVGNKADMVHLRQVSPEEGEILAKDFECSFAEVAAAEQVNQVGEVFHELCREVLTLRRRAKHSLLDRMLGSKSACRVYCRGKSDSALPKD

Summary

EMBL
KQ461108    KPJ09124.1    KQ459463    KPJ00589.1    AGBW02008503    OWR53205.1    + More
BABH01016007    JN033749    AEW46902.1    NWSH01001724    PCG70335.1    ODYU01004971    SOQ45381.1    NNAY01000303    OXU29350.1    GECZ01006208    JAS63561.1    KQ414627    KOC67415.1    KQ976750    KYN08614.1    KQ979440    KYN21475.1    ADTU01014359    KQ982182    KYQ59160.1    GL437123    EFN70999.1    QOIP01000009    RLU18969.1    GBBI01002286    JAC16426.1    GEDC01007940    JAS29358.1    DS235832    EEB18099.1    GAMC01009212    GAMC01009211    JAB97344.1    KQ434795    KZC05529.1    GDHF01019003    GDHF01017294    GDHF01008578    JAI33311.1    JAI35020.1    JAI43736.1    JXJN01008639    JXJN01008640    CCAG010001557    EZ424286    ADD20562.1    GBXI01015304    GBXI01009471    GBXI01005578    GBXI01001107    JAC98987.1    JAD04821.1    JAD08714.1    JAD13185.1    GAKP01008884    GAKP01008883    JAC50069.1    CH379070    EAL30348.1    CH479217    EDW33709.1    CM000159    EDW93661.1    CH954178    EDV50569.1    KQS43350.1    GFXV01001137    MBW12942.1    OUUW01000012    SPP87591.1    CM002912    KMY97957.1    GGMR01000297    MBY12916.1    CH964062    EDW78715.2    CH933809    EDW17461.1    GBHO01012941    GBHO01012939    GBRD01016446    GDHC01008438    GDHC01007595    JAG30663.1    JAG30665.1    JAG49380.1    JAQ10191.1    JAQ11034.1    JRES01000036    KNC34686.1    KQ976514    KYM82221.1    KA645279    AFP59908.1    KQ981340    KYN42543.1    CH940647    EDW68507.1    AE014296    BT029985    AAF50649.2    ABM92859.1    CH916366    EDV95696.1    GL447910    EFN85710.1    CP012525    ALC44393.1    CH902618    EDV41189.1    GGMS01007067    MBY76270.1    GU196316    ACZ26300.1    GFDF01006204    JAV07880.1    ABLF02015406    ABLF02026119    ABLF02026121    ABLF02026124    GAMD01003075    JAA98515.1    ATLV01019143    ATLV01019144    KE525263    KFB43788.1    AAAB01008960    DS232651    EDS44427.1    GEZM01038202    JAV81725.1    GFDL01005258    JAV29787.1    KK107199    EZA55543.1    LBMM01001144    KMQ96827.1    AJWK01020895    AJWK01020896    AJWK01020897    GDRN01066926    JAI64454.1    NEVH01012562    PNF30243.1    EAA11673.4    ACPB03014488    LJIJ01000267    ODM99632.1    IACF01004343    LAB69937.1    GL732526    EFX87957.1    UFQT01002274    SSX33066.1    KRK01287.1    CH480817    EDW50737.1    CM000363    EDX09471.1    GDIQ01082099    JAN12638.1    GDIQ01127870    JAL23856.1    KRF83890.1    GDIQ01145143    JAL06583.1    GDIP01028251    JAM75464.1    GDIQ01045061    JAN49676.1    DS497669    EFA12934.1    GDIQ01268210    JAJ83514.1    KQ435828    KOX71843.1    GDIQ01018187    JAN76550.1    CVRI01000042    CRK95713.1    LRGB01001361    KZS12315.1    GEZM01038204    JAV81723.1    GEZM01038203    JAV81724.1   
Pfam
PF00071   Ras        + More
PF00351   Biopterin_H
Interpro
IPR005225   Small_GTP-bd_dom        + More
IPR020849   Small_GTPase_Ras-type       
IPR001806   Small_GTPase       
IPR027417   P-loop_NTPase       
IPR018301   ArAA_hydroxylase_Fe/CU_BS       
IPR019774   Aromatic-AA_hydroxylase_C       
IPR036951   ArAA_hydroxylase_sf       
IPR041903   Eu_TyrOH_cat       
IPR036329   Aro-AA_hydroxylase_C_sf       
IPR001273   ArAA_hydroxylase       
IPR005962   Tyr_3_mOase       
IPR002912   ACT_dom       
SUPFAM
SSF52540   SSF52540        + More
SSF56534   SSF56534       
Gene 3D
PDB
2ATV     E-value=8.85935e-31,     Score=330

Ontologies

Topology

Length:
209
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.12013
Exp number, first 60 AAs:
0.11939
Total prob of N-in:
0.48945
outside
1  -  209
 
 

Population Genetic Test Statistics

Pi
18.342088
Theta
19.650528
Tajima's D
0.026961
CLR
0.019707
CSRT
0.385180740962952
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号