SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00150
Pre Gene Modal
BGIBMGA002001
Annotation
PREDICTED:_calcium-binding_mitochondrial_carrier_protein_SCaMC-2-like_isoform_X1_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 2.452
 

Sequence

CDS
ATGGTACAGTGTCATCCGCCGTTGGAAATAGAAGAATTACCAAAAGAAGACGAAGAAAGGCTTGAGAAACTTTTTTCTAAATTAGACCATGATGGAAACGGGAAGATTGATATACATGATCTGTCTGTCGCCCTCAAGGAGCTGGCCCCCCACATCAATCGCAGCTATGCAGAGAAATTTCTGGCCAAATCGGGATGGAAGGTGGCTGGGGACGTGACACTATCCGAATTCATCCACTACGTCAGAGAGCACGAGAAGAACTTGCGGCTGCAGTTCAAACACCTTGACAGAAATCAAGACGGCAAAGTGGACCTGGAGGAGCTTATATCGGCTTTTGCAGATTTGGGAATAGCGATAGGAAGAAACGAGGCGATGAATCTGTTAAAAAGGATGGACCAGGATGGCAGCCTCAACATCAGCTACGATGAATGGCGAGATTACCTGTTACTCGCTCCGGCAACCGATATCCACGCTCTCATACACTTTTGGAGGCATTCCACGGTAAATACAATGGGTAATTCGAATGCGTTGTTCGAAAACAATGAAAATGTAGACCAGTCTAGATAA
Protein
MVQCHPPLEIEELPKEDEERLEKLFSKLDHDGNGKIDIHDLSVALKELAPHINRSYAEKFLAKSGWKVAGDVTLSEFIHYVREHEKNLRLQFKHLDRNQDGKVDLEELISAFADLGIAIGRNEAMNLLKRMDQDGSLNISYDEWRDYLLLAPATDIHALIHFWRHSTVNTMGNSNALFENNENVDQSR

Summary

Similarity
Belongs to the mitochondrial carrier (TC 2.A.29) family.
EMBL
KQ461108    KPJ09122.1    KQ459463    KPJ00587.1    AGBW02008503    OWR53207.1    + More
NWSH01001724    PCG70333.1    GGFL01003019    MBW67197.1    GGFK01010032    MBW43353.1    GGFK01008692    MBW42013.1    GGFM01007939    MBW28690.1    GGFJ01009182    MBW58323.1    AXCM01003551    APCN01002286    GGFL01003084    MBW67262.1    GECU01013415    JAS94291.1    GDHF01025248    GDHF01000203    JAI27066.1    JAI52111.1    GECZ01030573    JAS39196.1    GAKP01018377    GAKP01018376    JAC40576.1    GDHF01005587    GDHF01003299    JAI46727.1    JAI49015.1    GAKP01018381    GAKP01018374    GAKP01018373    JAC40578.1    DS231978    EDS30136.1    GFDF01001880    JAV12204.1    ADMH02001836    ETN60978.1    GGFK01009913    MBW43234.1    NNAY01001951    OXU22472.1    GGFK01008729    MBW42050.1    AAAB01008960    EAL40106.3    GGFK01008660    MBW41981.1    GFDL01001516    JAV33529.1    GGFJ01009023    MBW58164.1    GFDL01001533    JAV33512.1    GEBQ01005198    JAT34779.1    KK852601    KDR20496.1    GDHF01012783    JAI39531.1    CH477309    EAT44005.1    GEZM01007487    JAV95143.1    GL449017    EFN83472.1    GAMC01009865    GAMC01009864    GAMC01009863    GAMC01009862    JAB96690.1    KQ983089    KYQ47653.1    GGFL01003958    MBW68136.1    GFDL01001517    JAV33528.1    GFDL01001519    JAV33526.1    CCAG010005148    GFDL01001538    JAV33507.1    GFDL01001537    JAV33508.1    KQ435687    KOX81370.1    JRES01001238    KNC24396.1    KQ980211    KYN17179.1    AY122132    AAM52644.1    KQ759893    OAD62089.1    AE014296    BT044506    AAF49921.2    AAS65015.1    ACH95280.1    CM002912    KMY99225.1    KMY99226.1    CH480815    EDW41254.1    CM000363    EDX10228.1    CM000159    EDW94293.2    KRK01751.1    KRK01752.1    KRK01753.1    CH954178    EDV51556.2    KQS43849.1    KQ981261    KYN44098.1    KK107419    EZA51069.1    CH963876    EDW76868.1    AXCN02000463    KQ414705    KOC63224.1    KK854171    PTY12528.1    CH379069    EAL30899.3    KRT07745.1    NEVH01002992    PNF40992.1    CH479188    EDW40326.1    KQ434783    KZC04844.1    OUUW01000012    SPP87418.1    ACPB03010292    ACPB03010293    ACPB03010294    ACPB03010295    CH902618    EDV38802.1    CH940647    EDW69262.2    KRF84282.1    GEDC01019534    JAS17764.1    CH916366    EDV96101.1    KRF84285.1    GFTR01006672    JAW09754.1    CH933809    EDW18018.2    GECL01000907    JAP05217.1    CP012525    ALC44326.1    KRG05900.1    GBBI01002493    JAC16219.1    KQ971361    EFA08771.1    GBYB01002097    JAG71864.1    APGK01017801    KB740053    KB632093    ENN81792.1    ERL88684.1    GL888223    EGI64450.1   
Pfam
PF13405   EF-hand_6        + More
PF13499   EF-hand_7
PF00153   Mito_carr
PF13202   EF-hand_5
Interpro
IPR018247   EF_Hand_1_Ca_BS        + More
IPR002048   EF_hand_dom       
IPR011992   EF-hand-dom_pair       
IPR002067   Mit_carrier       
IPR023395   Mt_carrier_dom_sf       
IPR002167   Graves_DC       
IPR018108   Mitochondrial_sb/sol_carrier       
IPR039647   EF_hand_pair_protein_CML-like       
SUPFAM
SSF47473   SSF47473        + More
SSF103506   SSF103506       
Gene 3D
PDB
4N5X     E-value=1.01923e-27,     Score=303

Ontologies

Topology

Length:
188
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00913
Exp number, first 60 AAs:
0
Total prob of N-in:
0.03565
outside
1  -  188
 
 

Population Genetic Test Statistics

Pi
17.225377
Theta
17.312643
Tajima's D
-1.682335
CLR
0.145047
CSRT
0.04024798760062
Interpretation
Uncertain
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