Gene

KWMTBOMO00147  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA002004

Annotation

PREDICTED:_ATP-binding_cassette_sub-family_F_member_2_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr1(-):4670556-4680073      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.021 Nuclear   Reliability : 1.888

CDS

ATGCCGTCGGACGCGAAGAAAAGGGCTCAGCAGAAGAAGAAGGAGCAAGCTAGCGGCAGAAACAAGAAGCCGGTGGTTCGTGTGACGAACGAAGACGAAAATGGTATCGGAACTAATGGTATATCCAGGGAAGACCGTGAGCTGACGGCAGAAGAGGCATTGTGCCTTAAGCTAGAAGCTGAAGCGAAAATGAATTCTGAAGCTCGTTCTTGTACTGGGTCACTGGCTGTGCACCCTCGTTCTAGAGATATCAAGATAGCTAACTTTTCAATTACTTTCTATGGGAGTGAGCTACTTCAAGATACTCTCCTGGAGTTGAATTGTGGGCGAAGATATGGGCTAGTCGGACTTAATGGGTGTGGAAAATCATCATTGCTTGCTGCCTTAGGACGCCGTGAGGTTCCTATTCCGGAACACATTGACATATTCCATCTGACTCGAGAAATGCCTGCTTCAGATAAGACTGCACTTCAGTGCGTCATGGAGGTTGACGAGGAGAGAGTCAAACTCGAGAAGCTCGCAGAAATGCTAGCCCACTGTGAAGATGATGAATCACAGGAGCAATTGATGGATGTATACGATCGTCTGGACGATTTGAGCGCCGACACGGCAGAGGCGCGTGCTGCTAATATCCTGCATGGTCTTGGCTTCACCAAGGAAATGCAGCAGAAGGCAACGAAAGACTTCTCCGGAGGTTGGCGTATGCGTATAGCTCTGGCACGAGCGCTATATGTTAAGCCGCACTTACTGCTGCTGGACGAGCCAACAAACCATCTCGATTTGGACGCCTGTGTGTGGCTTGAAGAAGAACTTAAACACTACAAAAGAATTTTAGTGTTGATCTCGCATTCGCAAGACTTCTTGAACGGTGTATGCACGAATATCGTTCATATGAGTAAGCGCCGTTTGAAGTATTACACTGGTAACTATGAAGCCTTCGTTAGGACGCGCATGGAATTGCTAGAGAATCAGATGAAACAGTACAACTGGGAACAAGACCAGATTGCACATATGAAAAACTACATAGCGAGATTCGGTCATGGTTCCGCCAAATTGGCGCGTCAAGCACAGTCCAAAGAAAAGACGTTAGCCAAAATGGTGGCACAGGGTCTCACCGAGAAGGTGGTTGATGACAAGATACTCAATTTCTACTTTCCGTCTTGTGGGAAAGTACCGCCACCCGTCATCATGGTGCAGAATGTATCATTCAGATACACTGATTCTGGGCCGTGGATATACAAGAATTTGGAATTTGGCATTGACCTTGATACAAGACTTGCTTTGGTTGGACCCAATGGAGCAGGCAAGTCAACGCTACTCAAGCTGCTTTATGGAGATTTAGTGCCTTCGACTGGTATGATCCGTAAAAACTCACATCTTCGTATTGGTCGTTACCACCAACACTTGCACGAGTTGTTGGATCTCGATCTGTCTCCACTTGATTACATGATGAAAGAGTTTCCCGAGGTTCGTGAGCGCGAAGAAATGAGAAAAATCATCGGTCGGTATGGTCTCACTGGGAGGCAGCAGGTGTGTCCCATGCGTCAGTTATCCGACGGGCAGCGTTGTCGTGTTGTATTCGCGTGGTTGGCCTGGCAGACTCCGCACCTGCTGTTATTGGACGAGCCCACTAACCATCTTGATATGGAAACCATCGATGCACTCGCAGACGCCATTAACGACTTTGACGGTGGCATGGTGCTCGTTAGTCACGACTTTAGACTTATTAATCAGGTGGCGAATGAAATTTGGATCTGTGAGAACGGTACTACCACAAAATGGGAGGGTGGTATCCTCAAATACAAAGATCACCTGAAATCTAAGATATTGAAGGATAATGCGGATAGCGCCGCTAAAATACGCAAATAG

Protein

MPSDAKKRAQQKKKEQASGRNKKPVVRVTNEDENGIGTNGISREDRELTAEEALCLKLEAEAKMNSEARSCTGSLAVHPRSRDIKIANFSITFYGSELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALGRREVPIPEHIDIFHLTREMPASDKTALQCVMEVDEERVKLEKLAEMLAHCEDDESQEQLMDVYDRLDDLSADTAEARAANILHGLGFTKEMQQKATKDFSGGWRMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKHYKRILVLISHSQDFLNGVCTNIVHMSKRRLKYYTGNYEAFVRTRMELLENQMKQYNWEQDQIAHMKNYIARFGHGSAKLARQAQSKEKTLAKMVAQGLTEKVVDDKILNFYFPSCGKVPPPVIMVQNVSFRYTDSGPWIYKNLEFGIDLDTRLALVGPNGAGKSTLLKLLYGDLVPSTGMIRKNSHLRIGRYHQHLHELLDLDLSPLDYMMKEFPEVREREEMRKIIGRYGLTGRQQVCPMRQLSDGQRCRVVFAWLAWQTPHLLLLDEPTNHLDMETIDALADAINDFDGGMVLVSHDFRLINQVANEIWICENGTTTKWEGGILKYKDHLKSKILKDNADSAAKIRK

Uniprot

H9IXM1   Q1HQD2   A0A2H4KAX7   A0A2H1VII9   A0A212FHJ1   A0A194QVX9   + More
A0A194Q6F6   A0A2A4JDW4   A0A2Z5U7C0   A0A0A1X3I6   D6WNA4   W8C527   A0A034VMA5   A0A1L8DFA7   A0A0K8TPF1   A0A1L8DFG7   A0A0K8V3D6   B3MZ10   A0A0U9HSF6   B4L701   B4MA76   B4JX52   B4R5G2   A0A3L8DF04   A0A1W4V3U7   A0A1B6CXJ3   B4PWR4   B4MJ49   B4IKA8   A0A026VTK1   Q9VXR5   A0A1B6DLF1   A0A1S3CVD4   B3NTH6   A0A1B0FDX9   A0A3B0JEH6   A0A1B0AN90   A0A1A9XH56   A0A1A9VRS1   Q29IA7   K7IM55   A0A1A9ZIC2   A0A0R3NZB2   B4GWB0   A0A1B6FHU5   A0A232FCH9   A0A1A9WSY0   A0A161UF68   A0A1L8ECL4   A0A1B6JD99   A0A1I8NWP8   A0A0C9PUT3   J3JYW4   T1P9Q4   A0A2J7QKQ3   A0A0M9A0L2   A0A1B6KIP0   A0A084WR87   A0A067R4B8   A0A0M3QZK8   T1E778   A0A182JHZ5   A0A2M3ZZ78   B0W6T7   A0A1Q3FEN3   A0A2A3ENJ5   A0A087ZP04   A0A1J1IW90   A0A310SAH6   A0A182XAF6   Q7PQX1   A0A182HS95   A0A182VHJ8   A0A182LTQ8   A0A182NR73   A0A182VZV8   A0A182RTI0   Q16RE9   A0A0L0C710   W5JST3   E2BI03   A0A023EUB4   A0A182FQ41   A0A182PKT3   A0A182JNN8   U5ETJ0   A0A182Y419   A0A182QSR7   E0VXE8   E2AF36   A0A158NAA0   E9I9F3   A0A0L7R0I8   F4WJU9   A0A0A9Z993   A0A195BCG3   T1HZ13   A0A195FTP6   J9K7W5   A0A0V0G2N8  

Pubmed

19121390    22118469    26354079    25830018    18362917    19820115    + More
24495485    25348373    29121518    26369729    17994087    18057021    30249741    17550304    24508170    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    15632085    20075255    23185243    28648823    22516182    23537049    25315136    24438588    24845553    12364791    14747013    17210077    17510324    26108605    20920257    23761445    20798317    24945155    26483478    25244985    20566863    21347285    21282665    21719571    25401762    26823975   

EMBL

BABH01016003    DQ443120    ABF51209.1    KY484785    ASS36027.1    ODYU01002555    + More
SOQ40212.1    AGBW02008503    OWR53209.1    KQ461108    KPJ09120.1    KQ459463    KPJ00585.1    NWSH01001858    PCG69898.1    AP017515    BBB06849.1    GBXI01009059    JAD05233.1    KQ971342    EFA03773.1    GAMC01005124    JAC01432.1    KY849636    GAKP01015348    ATY74517.1    JAC43604.1    GFDF01008966    JAV05118.1    GDAI01001336    JAI16267.1    GFDF01008967    JAV05117.1    GDHF01019209    GDHF01016348    JAI33105.1    JAI35966.1    CH902632    EDV32854.1    KPU74167.1    GARF01000066    JAC88892.1    CH933812    EDW06147.1    KRG07163.1    CH940655    EDW66135.1    CH916376    EDV95328.1    CM000366    EDX18007.1    QOIP01000009    RLU18469.1    GEDC01019119    GEDC01004094    JAS18179.1    JAS33204.1    CM000162    EDX01810.1    CH963738    EDW72138.1    CH480852    EDW51500.1    KK108171    EZA46836.1    AE014298    AY061059    AAF48493.1    AAL28607.1    GEDC01027856    GEDC01026318    GEDC01016806    GEDC01010803    GEDC01009050    GEDC01002643    JAS09442.1    JAS10980.1    JAS20492.1    JAS26495.1    JAS28248.1    JAS34655.1    MH172508    QAA95915.1    CH954180    EDV46980.1    CCAG010011618    OUUW01000003    SPP78582.1    JXJN01000753    CH379063    EAL32746.2    KRT06281.1    KRT06282.1    CH479194    EDW26994.1    GECZ01019993    JAS49776.1    NNAY01000419    OXU28531.1    KF828792    AIN44109.1    GFDG01002352    JAV16447.1    GECU01010608    JAS97098.1    GBYB01005168    JAG74935.1    APGK01037599    BT128445    KB740948    KB632288    AEE63402.1    ENN77364.1    ERL91490.1    KA645476    AFP60105.1    NEVH01013262    PNF29138.1    KQ435798    KOX73379.1    GEBQ01028655    JAT11322.1    ATLV01025994    KE525404    KFB52731.1    KK852902    KDR14063.1    CP012528    ALC49593.1    GAMD01003282    JAA98308.1    GGFK01000461    MBW33782.1    DS231849    EDS36918.1    GFDL01009037    JAV26008.1    KZ288204    PBC33270.1    CVRI01000063    CRL04477.1    KQ762329    OAD55974.1    AAAB01008859    EAA08160.6    APCN01000256    AXCM01000275    CH477714    EAT36980.1    JRES01000814    KNC28193.1    ADMH02000547    ETN65975.1    GL448407    EFN84681.1    JXUM01100955    GAPW01000598    KQ564612    JAC13000.1    KXJ72019.1    GANO01002757    JAB57114.1    AXCN02001469    DS235830    EEB18054.1    GL438984    EFN67991.1    ADTU01001463    ADTU01001464    GL761800    EFZ22792.1    KQ414670    KOC64362.1    GL888186    EGI65591.1    GBHO01005224    GBRD01010341    GBRD01010340    GDHC01013851    GDHC01009732    JAG38380.1    JAG55483.1    JAQ04778.1    JAQ08897.1    KQ976528    KYM81885.1    ACPB03021331    KQ981264    KYN43990.1    ABLF02027288    GECL01003743    JAP02381.1   

Proteomes

UP000005204    UP000007151    UP000053240    UP000053268    UP000218220    UP000007266    + More
UP000007801    UP000009192    UP000008792    UP000001070    UP000000304    UP000279307    UP000192221    UP000002282    UP000007798    UP000001292    UP000053097    UP000000803    UP000079169    UP000008711    UP000092444    UP000268350    UP000092460    UP000092443    UP000078200    UP000001819    UP000002358    UP000092445    UP000008744    UP000215335    UP000091820    UP000095300    UP000019118    UP000030742    UP000095301    UP000235965    UP000053105    UP000030765    UP000027135    UP000092553    UP000075880    UP000002320    UP000242457    UP000005203    UP000183832    UP000076407    UP000007062    UP000075840    UP000075903    UP000075883    UP000075884    UP000075920    UP000075900    UP000008820    UP000037069    UP000000673    UP000008237    UP000069940    UP000249989    UP000069272    UP000075885    UP000075881    UP000076408    UP000075886    UP000009046    UP000000311    UP000005205    UP000053825    UP000007755    UP000078540    UP000015103    UP000078541    UP000007819   

PRIDE

H9IXM1    Q1HQD2   

Pfam

PF00005   ABC_tran        + More
PF12848   ABC_tran_Xtn
PF00080   Sod_Cu

Interpro

IPR027417   P-loop_NTPase        + More
IPR017871   ABC_transporter_CS       
IPR003439   ABC_transporter-like       
IPR032781   ABC_tran_Xtn       
IPR003593   AAA+_ATPase       
IPR036423   SOD-like_Cu/Zn_dom_sf       
IPR001424   SOD_Cu_Zn_dom       

SUPFAM

SSF52540   SSF52540        + More
SSF49329   SSF49329       

Gene 3D

2.60.40.200    

ProteinModelPortal

H9IXM1   Q1HQD2   A0A2H4KAX7   A0A2H1VII9   A0A212FHJ1   A0A194QVX9   + More
A0A194Q6F6   A0A2A4JDW4   A0A2Z5U7C0   A0A0A1X3I6   D6WNA4   W8C527   A0A034VMA5   A0A1L8DFA7   A0A0K8TPF1   A0A1L8DFG7   A0A0K8V3D6   B3MZ10   A0A0U9HSF6   B4L701   B4MA76   B4JX52   B4R5G2   A0A3L8DF04   A0A1W4V3U7   A0A1B6CXJ3   B4PWR4   B4MJ49   B4IKA8   A0A026VTK1   Q9VXR5   A0A1B6DLF1   A0A1S3CVD4   B3NTH6   A0A1B0FDX9   A0A3B0JEH6   A0A1B0AN90   A0A1A9XH56   A0A1A9VRS1   Q29IA7   K7IM55   A0A1A9ZIC2   A0A0R3NZB2   B4GWB0   A0A1B6FHU5   A0A232FCH9   A0A1A9WSY0   A0A161UF68   A0A1L8ECL4   A0A1B6JD99   A0A1I8NWP8   A0A0C9PUT3   J3JYW4   T1P9Q4   A0A2J7QKQ3   A0A0M9A0L2   A0A1B6KIP0   A0A084WR87   A0A067R4B8   A0A0M3QZK8   T1E778   A0A182JHZ5   A0A2M3ZZ78   B0W6T7   A0A1Q3FEN3   A0A2A3ENJ5   A0A087ZP04   A0A1J1IW90   A0A310SAH6   A0A182XAF6   Q7PQX1   A0A182HS95   A0A182VHJ8   A0A182LTQ8   A0A182NR73   A0A182VZV8   A0A182RTI0   Q16RE9   A0A0L0C710   W5JST3   E2BI03   A0A023EUB4   A0A182FQ41   A0A182PKT3   A0A182JNN8   U5ETJ0   A0A182Y419   A0A182QSR7   E0VXE8   E2AF36   A0A158NAA0   E9I9F3   A0A0L7R0I8   F4WJU9   A0A0A9Z993   A0A195BCG3   T1HZ13   A0A195FTP6   J9K7W5   A0A0V0G2N8  

PDB

5ZXD     E-value=3.45928e-95,     Score=891

KEGG

732866    K06185 ATP-binding cassette, subfamily F, member 2 | (RefSeq) ATP-binding cassette sub-family F memb

GO

GO:0016887   GO:0005524   GO:0006801   GO:0046872   GO:0015439   GO:0103115   GO:0006810   GO:0007018   GO:0030286   GO:0048013   GO:0005003   GO:0005887   GO:0007169   GO:0016021  

Length:

622

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0176399999999999

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00399

outside

1  -  622

 

 

Pi

11.558453

Theta

12.32763

Tajima's D

-0.658651

CLR

0.005579

CSRT

0.206889655517224

Interpretation

Possibly Positive selection