Gene

KWMTBOMO00144

Pre Gene Modal

BGIBMGA002148

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_dynein_heavy_chain_5?_axonemal_[Plutella_xylostella]

Location

Bomo_Chr1(+):4640744-4645226      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.775

CDS

ATGTCTGATACCAATAACAAATTCCTGGAACTTCTTAACACCCTCATAGATCAGACGACGAGAGATCTGCTCAAGATCGAAAGGATCAAATTTGAAACATTGATCACCATTCACGTGCATCAGCGAGATATCTTTGATATGCTGTGCCGTCTTAATGTTCGTTCTGCAAACGACTTCGAATGGCTGAAGCAATGCCGGTTCTACTTCAAAGAGGACACGGACAAGACCTGGATATCGGTGACAGACGTCACGTTCACTTACCAGAACGAATATCTGGGATGTACCGAGAGGCTTGTTATTACTCCCTTAACTGACAGATGTTACATTACATTAGCCCAAGCCCTCGCCATGAGCATGGGCGGGGCTCCATGCGGCCCTGCGGGGACCGGCAAAACGGAAACGGTCAAAGACATGGGGAAAACTCTGGCCAAATACGTCGTCGTCTTCAACTGTTCGGATCAAATGGATTACAGGTACCATTAG

Protein

MSDTNNKFLELLNTLIDQTTRDLLKIERIKFETLITIHVHQRDIFDMLCRLNVRSANDFEWLKQCRFYFKEDTDKTWISVTDVTFTYQNEYLGCTERLVITPLTDRCYITLAQALAMSMGGAPCGPAGTGKTETVKDMGKTLAKYVVVFNCSDQMDYRYH

Uniprot

H9IY15   A0A2Z5U8A6   A0A194Q4X1   A0A212FHI9   A0A182T3K7   B0WIM3   + More
A0A1S4FNK9   Q16UI0   A0A1Q3FM85   A0A1Q3FSZ1   A0A2S2Q235   A0A2S2PXW6   W5JHD8   A0A1J1ICX5   J9JXN3   A0A182JFK1   A0A182N569   A0A182QZT5   A0A182FSH4   A0A182PIC7   A0A084W3D4   A0A182MWN1   A0A182YK77   A0A182HJD6   A0A182TQ18   A0A182X1W7   A0A182VEN6   Q7PTQ4   A0A182VQN9   A0A182RHW0   A0A0K8ULD1   A0A182JRZ0   A0A194QUB4   A0A1B0G5G6   A0A1A9VBD6   A0A1A9WJE8   A0A1A9ZNV3   A0A1A9Y7F3   K7J7S2   A0A0M8ZZ88   A0A232F2W8   A0A195D4P3   A0A0R3NPI5   A0A0R3NJK3   A0A0R3NQ41   B5DVH1   A0A0R3NNR0   B4N841   A0A0L0CCG7   A0A0R3NJX4   A0A151J9E5   A0A0Q9X3M2   A0A1I8PHL1   A0A3B0KP73   A0A195FIH3   F4WDX4   A0A158P2P5   A0A195BBY4   A0A151WTR8   A0A0J7L6K6   D6WIS3   B4K645   B4M499   A0A0Q9W1A9   A0A0M4EJY3   B4JFF8   T1HLR4   B4QWI5   A0A1I8M7D6   B3M1H1   N6U4W8   U4U2X2   B3NZN0   Q9VH97   A0A0R1E219   A0A1W4W0Z8   A0A0R1E7J6   A0A0B4K614   A0A0B4LH20   A0A1W4W0B5   B4PVC1   A0A0B4K648   A0A088AS19   B4HJW0   E2AZZ0   A0A0L7QTW2   E0W0Q7   E2CA47   A0A154PFK8   A0A336LPD9   A0A026WY55   A0A3L8DYY0   A0A310SAR6   A0A3L5TRU5   A0A1L8FXE3   A0A0K2TVA2   I3JJG4   A0A3B4FQR2   I3JJG5   A0A3B4ZWX5  

Pubmed

19121390    26354079    22118469    17510324    20920257    23761445    + More
24438588    25244985    12364791    14747013    17210077    20075255    28648823    15632085    17994087    23185243    26108605    21719571    21347285    18362917    19820115    25315136    23537049    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    17550304    20798317    20566863    24508170    30249741    26977809    27762356    25186727   

EMBL

BABH01016001    BABH01016002    AP017515    BBB06850.1    KQ459463    KPJ00583.1    + More
AGBW02008503    OWR53211.1    DS231950    EDS28578.1    CH477621    EAT38201.1    GFDL01006315    JAV28730.1    GFDL01004377    JAV30668.1    GGMS01002633    MBY71836.1    GGMS01001007    MBY70210.1    ADMH02001490    ETN62330.1    CVRI01000047    CRK98135.1    ABLF02035929    ABLF02035940    AXCN02000174    ATLV01019918    ATLV01019919    ATLV01019920    KE525285    KFB44728.1    AXCM01003484    AXCM01003485    APCN01002153    AAAB01008794    EAA03542.6    GDHF01024953    JAI27361.1    KQ461108    KPJ09118.1    CCAG010000321    AAZX01003355    AAZX01003361    AAZX01011149    KQ435816    KOX72633.1    NNAY01001113    OXU25094.1    KQ976885    KYN07399.1    CM000070    KRT01085.1    KRT01086.1    KRT01083.1    KRT01088.1    EDY68486.3    KRT01087.1    CH964232    EDW81292.2    JRES01000608    KNC29950.1    KRT01084.1    KQ979404    KYN21688.1    KRF99424.1    OUUW01000014    SPP88419.1    KQ981523    KYN40198.1    GL888096    EGI67606.1    ADTU01007305    KQ976530    KYM81709.1    KQ982753    KYQ51236.1    LBMM01000498    KMQ98208.1    KQ971321    EEZ99499.2    CH933806    EDW14095.2    CH940652    EDW59460.2    KRF78860.1    CP012526    ALC45340.1    CH916369    EDV93439.1    ACPB03010558    ACPB03010559    CM000364    EDX13589.1    CH902617    EDV43262.2    APGK01049735    APGK01049736    KB741156    ENN73607.1    KB631941    ERL87387.1    CH954181    EDV49740.1    AE014297    AAF54422.5    CM000160    KRK03304.1    KRK03303.1    AFH06325.1    AHN57255.1    EDW96694.2    AFH06326.1    CH480815    EDW42844.1    GL444289    EFN60993.1    KQ414736    KOC62093.1    DS235862    EEB19213.1    GL453920    EFN75202.1    KQ434893    KZC10625.1    UFQT01000100    SSX19932.1    KK107069    EZA60758.1    QOIP01000002    RLU25661.1    KQ765917    OAD53781.1    KV587705    OPL32670.1    CM004476    OCT76246.1    HACA01012256    CDW29617.1    AERX01010255    AERX01010256   

Proteomes

UP000005204    UP000053268    UP000007151    UP000075901    UP000002320    UP000008820    + More
UP000000673    UP000183832    UP000007819    UP000075880    UP000075884    UP000075886    UP000069272    UP000075885    UP000030765    UP000075883    UP000076408    UP000075840    UP000075902    UP000076407    UP000075903    UP000007062    UP000075920    UP000075900    UP000075881    UP000053240    UP000092444    UP000078200    UP000091820    UP000092445    UP000092443    UP000002358    UP000053105    UP000215335    UP000078542    UP000001819    UP000007798    UP000037069    UP000078492    UP000095300    UP000268350    UP000078541    UP000007755    UP000005205    UP000078540    UP000075809    UP000036403    UP000007266    UP000009192    UP000008792    UP000092553    UP000001070    UP000015103    UP000000304    UP000095301    UP000007801    UP000019118    UP000030742    UP000008711    UP000000803    UP000002282    UP000192221    UP000005203    UP000001292    UP000000311    UP000053825    UP000009046    UP000008237    UP000076502    UP000053097    UP000279307    UP000186698    UP000005207    UP000261460    UP000261400   

PRIDE

H9IY15    Q9VH97   

Pfam

PF12774   AAA_6        + More
PF08393   DHC_N2
PF12781   AAA_9
PF03028   Dynein_heavy
PF18198   AAA_lid_11
PF12780   AAA_8
PF18199   Dynein_C
PF17852   Dynein_AAA_lid
PF17857   AAA_lid_1
PF12777   MT
PF08385   DHC_N1

Interpro

IPR035699   AAA_6        + More
IPR041228   Dynein_C       
IPR041658   AAA_lid_11       
IPR003593   AAA+_ATPase       
IPR041466   Dynein_AAA5_ext       
IPR013602   Dynein_heavy_dom-2       
IPR004273   Dynein_heavy_D6_P-loop       
IPR026983   DHC_fam       
IPR024743   Dynein_HC_stalk       
IPR024317   Dynein_heavy_chain_D4_dom       
IPR027417   P-loop_NTPase       
IPR035706   AAA_9       
IPR041589   DNAH3_AAA_lid_1       
IPR013594   Dynein_heavy_dom-1       

SUPFAM

SSF52540   SSF52540       

ProteinModelPortal

H9IY15   A0A2Z5U8A6   A0A194Q4X1   A0A212FHI9   A0A182T3K7   B0WIM3   + More
A0A1S4FNK9   Q16UI0   A0A1Q3FM85   A0A1Q3FSZ1   A0A2S2Q235   A0A2S2PXW6   W5JHD8   A0A1J1ICX5   J9JXN3   A0A182JFK1   A0A182N569   A0A182QZT5   A0A182FSH4   A0A182PIC7   A0A084W3D4   A0A182MWN1   A0A182YK77   A0A182HJD6   A0A182TQ18   A0A182X1W7   A0A182VEN6   Q7PTQ4   A0A182VQN9   A0A182RHW0   A0A0K8ULD1   A0A182JRZ0   A0A194QUB4   A0A1B0G5G6   A0A1A9VBD6   A0A1A9WJE8   A0A1A9ZNV3   A0A1A9Y7F3   K7J7S2   A0A0M8ZZ88   A0A232F2W8   A0A195D4P3   A0A0R3NPI5   A0A0R3NJK3   A0A0R3NQ41   B5DVH1   A0A0R3NNR0   B4N841   A0A0L0CCG7   A0A0R3NJX4   A0A151J9E5   A0A0Q9X3M2   A0A1I8PHL1   A0A3B0KP73   A0A195FIH3   F4WDX4   A0A158P2P5   A0A195BBY4   A0A151WTR8   A0A0J7L6K6   D6WIS3   B4K645   B4M499   A0A0Q9W1A9   A0A0M4EJY3   B4JFF8   T1HLR4   B4QWI5   A0A1I8M7D6   B3M1H1   N6U4W8   U4U2X2   B3NZN0   Q9VH97   A0A0R1E219   A0A1W4W0Z8   A0A0R1E7J6   A0A0B4K614   A0A0B4LH20   A0A1W4W0B5   B4PVC1   A0A0B4K648   A0A088AS19   B4HJW0   E2AZZ0   A0A0L7QTW2   E0W0Q7   E2CA47   A0A154PFK8   A0A336LPD9   A0A026WY55   A0A3L8DYY0   A0A310SAR6   A0A3L5TRU5   A0A1L8FXE3   A0A0K2TVA2   I3JJG4   A0A3B4FQR2   I3JJG5   A0A3B4ZWX5  

PDB

5NUG     E-value=3.2291e-34,     Score=357

KEGG

101738460    K10408 dynein heavy chain, axonemal | (RefSeq) dynein heavy chain 5, axonemal

GO

GO:0003777   GO:0005524   GO:0030286   GO:0007018   GO:0036158   GO:0045503   GO:0051959   GO:0008569   GO:0036157   GO:0045505   GO:0016887   GO:0042623   GO:0003341   GO:0007605  

PANTHER

PTHR10676  

Length:

160

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.2525

Exp number, first 60 AAs:

0

Total prob of N-in:

0.21450

outside

1  -  160

 

 

Pi

13.907298

Theta

14.094402

Tajima's D

0.040291

CLR

0.009449

CSRT

0.388180590970451

Interpretation

Uncertain