Gene

KWMTBOMO00143

Pre Gene Modal

BGIBMGA002147

Annotation

Dynein_heavy_chain_5?_axonemal_[Papilio_xuthus]

Location

Bomo_Chr1(+):4513179-4514403      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.847

CDS

ATGCAACCGCAGTTTGAAGAGGATTTGAAAAACAATTTGGACAAATTTAGGGATGACAACGCCGAATACTGTCACGAGTATAGACACGCTGGACCGATGCAGCCAGGGTTGACCCCACGAGAAGCATCCGATAGATTGATACTTTTTCAAAATCGGTTCGACGGAATGTGGCGAAAGCTTCAGACCTACCAGAACGGTGAAGAGCTTTTTGGTCTTCCCCATACAGAATACCCTGAATTAGCCCAAATAAGAAAGGAACTGAACTTACTCCAGAAGCTGTATAAGCTTTACAACGACGTTATTGACAGGGTCAGTAGTTACTACGACATACCCTGGGGAGAAGTTAATATTGAAGAGATCAACAATGAACTGATGGAGTTTCAGAACAGATGCCGAAAGTTGCCGAAAGGTCTCAAAGAGTGGCCGGCATTCTTTGCCCTTAAGAAGACCATCGACGATTTCAACGATATGTGTCCTCTCCTTGAGCTGATGGCCAACAAAGCTATGAAGCCTCGCCATTGGCAGAGGATCATGGAGGTCACGAAATACGTTTTTGAGTTAGACAACGAGGACTTCTGCTTGAAAAATATACTAGAAGCACCCCTGCTGCAGAACAAGGAGGATATCGAGGTAAGTAGTAGAACTGAGGCTTTAAACAATCGATTCACTTATGACATCGTGCATAAGTACTAA

Protein

MQPQFEEDLKNNLDKFRDDNAEYCHEYRHAGPMQPGLTPREASDRLILFQNRFDGMWRKLQTYQNGEELFGLPHTEYPELAQIRKELNLLQKLYKLYNDVIDRVSSYYDIPWGEVNIEEINNELMEFQNRCRKLPKGLKEWPAFFALKKTIDDFNDMCPLLELMANKAMKPRHWQRIMEVTKYVFELDNEDFCLKNILEAPLLQNKEDIEVSSRTEALNNRFTYDIVHKY

Uniprot

A0A2H1VRY4   A0A2A4IX12   A0A194Q4X1   A0A194QUB4   A0A212FHI9   A0A1B6EKS6   + More
A0A151WTR8   A0A195D4P3   A0A336LFL1   A0A3Q0J3D6   E2CA47   T1GKZ1   A0A195FIH3   A0A151J9E5   A0A158P2P5   A0A195BBY4   E2AZZ0   D6WIS3   U4U2X2   N6U4W8   F4WDX4   A0A0J7L6K6   A0A1B0GJY1   E0W0Q7   K7J7S2   A0A232F2W8   A0A154PFK8   A0A0K8ULD1   A0A336LPD9   A0A0L7QTW2   A0A1B0G5G6   A0A1A9ZNV3   A0A1A9Y7F3   A0A1B0C3G6   A0A310SAR6   A0A182T3K7   A0A1A9VBD6   A0A0M4EJY3   A0A1A9WJE8   A0A088AS19   A0A026WY55   B4N841   A0A0Q9X3M2   A0A0L0CCG7   B4M499   A0A0Q9W1A9   A0A0R3NPI5   A0A0R3NJK3   A0A0R3NQ41   B5DVH1   A0A0R3NJX4   A0A0B4K614   A0A0R3NNR0   A0A3B0KP73   Q9VH97   A0A1I8M7D6   A0A1I8PHL1   B4QWI5   A0A0R1E219   A0A0B4LH20   A0A0R1E7J6   B3M1H1   B3NZN0   A0A0B4K648   B4PVC1   T1HLR4   B4JFF8   B4K645   B4HJW0   A0A1W4W0B5   A0A1W4W0Z8   B0WIM3   A0A1J1ICX5   A0A182JFK1   A0A182QZT5   A0A084W3D4   A0A182N569   A0A182RHW0   A0A182YK77   A0A182VQN9   A0A182X1W7   A0A182VEN6   Q7PTQ4   A0A182JRZ0   A0A182HJD6   Q16UI0   A0A1S4FNK9   A0A1Q3FM85   A0A182PIC7   A0A182LCP2   A0A2S2Q235   A0A2S2PXW6   A0A182FSH4   A0A1Q3FSZ1   J9JXN3   A0A0M8ZZ88   A0A182MWN1   A0A182TQ18   A0A0N7Z9W2   A0A1B0GQ26  

Pubmed

26354079    22118469    20798317    21347285    18362917    19820115    + More
23537049    21719571    20566863    20075255    28648823    24508170    17994087    26108605    15632085    23185243    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    25315136    17550304    24438588    25244985    12364791    14747013    17210077    17510324    20966253   

EMBL

ODYU01003896    SOQ43222.1    NWSH01005052    PCG64477.1    KQ459463    KPJ00583.1    + More
KQ461108    KPJ09118.1    AGBW02008503    OWR53211.1    GECZ01031268    JAS38501.1    KQ982753    KYQ51236.1    KQ976885    KYN07399.1    UFQS01004939    UFQT01004939    SSX16626.1    SSX35823.1    GL453920    EFN75202.1    CAQQ02108091    KQ981523    KYN40198.1    KQ979404    KYN21688.1    ADTU01007305    KQ976530    KYM81709.1    GL444289    EFN60993.1    KQ971321    EEZ99499.2    KB631941    ERL87387.1    APGK01049735    APGK01049736    KB741156    ENN73607.1    GL888096    EGI67606.1    LBMM01000498    KMQ98208.1    AJWK01022437    AJWK01022438    AJWK01022439    DS235862    EEB19213.1    AAZX01003355    AAZX01003361    AAZX01011149    NNAY01001113    OXU25094.1    KQ434893    KZC10625.1    GDHF01024953    JAI27361.1    UFQT01000100    SSX19932.1    KQ414736    KOC62093.1    CCAG010000321    JXJN01024951    KQ765917    OAD53781.1    CP012526    ALC45340.1    KK107069    EZA60758.1    CH964232    EDW81292.2    KRF99424.1    JRES01000608    KNC29950.1    CH940652    EDW59460.2    KRF78860.1    CM000070    KRT01085.1    KRT01086.1    KRT01083.1    KRT01088.1    EDY68486.3    KRT01084.1    AE014297    AFH06325.1    KRT01087.1    OUUW01000014    SPP88419.1    AAF54422.5    CM000364    EDX13589.1    CM000160    KRK03304.1    AHN57255.1    KRK03303.1    CH902617    EDV43262.2    CH954181    EDV49740.1    AFH06326.1    EDW96694.2    ACPB03010558    ACPB03010559    CH916369    EDV93439.1    CH933806    EDW14095.2    CH480815    EDW42844.1    DS231950    EDS28578.1    CVRI01000047    CRK98135.1    AXCN02000174    ATLV01019918    ATLV01019919    ATLV01019920    KE525285    KFB44728.1    AAAB01008794    EAA03542.6    APCN01002153    CH477621    EAT38201.1    GFDL01006315    JAV28730.1    GGMS01002633    MBY71836.1    GGMS01001007    MBY70210.1    GFDL01004377    JAV30668.1    ABLF02035929    ABLF02035940    KQ435816    KOX72633.1    AXCM01003484    AXCM01003485    GDRN01108828    JAI57160.1    AJVK01016013   

Proteomes

UP000218220    UP000053268    UP000053240    UP000007151    UP000075809    UP000078542    + More
UP000079169    UP000008237    UP000015102    UP000078541    UP000078492    UP000005205    UP000078540    UP000000311    UP000007266    UP000030742    UP000019118    UP000007755    UP000036403    UP000092461    UP000009046    UP000002358    UP000215335    UP000076502    UP000053825    UP000092444    UP000092445    UP000092443    UP000092460    UP000075901    UP000078200    UP000092553    UP000091820    UP000005203    UP000053097    UP000007798    UP000037069    UP000008792    UP000001819    UP000000803    UP000268350    UP000095301    UP000095300    UP000000304    UP000002282    UP000007801    UP000008711    UP000015103    UP000001070    UP000009192    UP000001292    UP000192221    UP000002320    UP000183832    UP000075880    UP000075886    UP000030765    UP000075884    UP000075900    UP000076408    UP000075920    UP000076407    UP000075903    UP000007062    UP000075881    UP000075840    UP000008820    UP000075885    UP000075882    UP000069272    UP000007819    UP000053105    UP000075883    UP000075902    UP000092462   

PRIDE

Q9VH97   

Pfam

PF08393   DHC_N2        + More
PF08385   DHC_N1
PF03028   Dynein_heavy
PF12780   AAA_8
PF18198   AAA_lid_11
PF17852   Dynein_AAA_lid
PF18199   Dynein_C
PF17857   AAA_lid_1
PF12777   MT
PF12774   AAA_6
PF12781   AAA_9

Interpro

IPR013602   Dynein_heavy_dom-2        + More
IPR026983   DHC_fam       
IPR013594   Dynein_heavy_dom-1       
IPR041658   AAA_lid_11       
IPR041228   Dynein_C       
IPR035699   AAA_6       
IPR004273   Dynein_heavy_D6_P-loop       
IPR003593   AAA+_ATPase       
IPR041466   Dynein_AAA5_ext       
IPR027417   P-loop_NTPase       
IPR024743   Dynein_HC_stalk       
IPR024317   Dynein_heavy_chain_D4_dom       
IPR035706   AAA_9       
IPR041589   DNAH3_AAA_lid_1       

SUPFAM

SSF52540   SSF52540       

ProteinModelPortal

A0A2H1VRY4   A0A2A4IX12   A0A194Q4X1   A0A194QUB4   A0A212FHI9   A0A1B6EKS6   + More
A0A151WTR8   A0A195D4P3   A0A336LFL1   A0A3Q0J3D6   E2CA47   T1GKZ1   A0A195FIH3   A0A151J9E5   A0A158P2P5   A0A195BBY4   E2AZZ0   D6WIS3   U4U2X2   N6U4W8   F4WDX4   A0A0J7L6K6   A0A1B0GJY1   E0W0Q7   K7J7S2   A0A232F2W8   A0A154PFK8   A0A0K8ULD1   A0A336LPD9   A0A0L7QTW2   A0A1B0G5G6   A0A1A9ZNV3   A0A1A9Y7F3   A0A1B0C3G6   A0A310SAR6   A0A182T3K7   A0A1A9VBD6   A0A0M4EJY3   A0A1A9WJE8   A0A088AS19   A0A026WY55   B4N841   A0A0Q9X3M2   A0A0L0CCG7   B4M499   A0A0Q9W1A9   A0A0R3NPI5   A0A0R3NJK3   A0A0R3NQ41   B5DVH1   A0A0R3NJX4   A0A0B4K614   A0A0R3NNR0   A0A3B0KP73   Q9VH97   A0A1I8M7D6   A0A1I8PHL1   B4QWI5   A0A0R1E219   A0A0B4LH20   A0A0R1E7J6   B3M1H1   B3NZN0   A0A0B4K648   B4PVC1   T1HLR4   B4JFF8   B4K645   B4HJW0   A0A1W4W0B5   A0A1W4W0Z8   B0WIM3   A0A1J1ICX5   A0A182JFK1   A0A182QZT5   A0A084W3D4   A0A182N569   A0A182RHW0   A0A182YK77   A0A182VQN9   A0A182X1W7   A0A182VEN6   Q7PTQ4   A0A182JRZ0   A0A182HJD6   Q16UI0   A0A1S4FNK9   A0A1Q3FM85   A0A182PIC7   A0A182LCP2   A0A2S2Q235   A0A2S2PXW6   A0A182FSH4   A0A1Q3FSZ1   J9JXN3   A0A0M8ZZ88   A0A182MWN1   A0A182TQ18   A0A0N7Z9W2   A0A1B0GQ26  

PDB

5NUG     E-value=0.00737685,     Score=90

KEGG

101738381    K13159 heterogeneous nuclear ribonucleoprotein L | (RefSeq) heterogeneous nuclear ribonucleoprotein

GO

GO:0003777   GO:0007018   GO:0030286   GO:0005524   GO:0016021   GO:0016887   GO:0042623   GO:0008569   GO:0036157   GO:0003341   GO:0007605   GO:0045505   GO:0036158   GO:0045503   GO:0051959  

PANTHER

PTHR10676  

Length:

230

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.03711

outside

1  -  230

 

 

Pi

3.097505

Theta

11.599243

Tajima's D

-2.134

CLR

0

CSRT

0.00694965251737413

Interpretation

Uncertain