Gene

KWMTBOMO00140

Pre Gene Modal

BGIBMGA002144

Annotation

PREDICTED:_dynein_heavy_chain_5?_axonemal-like_[Bombyx_mori]

Location

Bomo_Chr1(+):4397239-4402554      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.694

CDS

ATGTTCAAGAGACAGAAGGACGACCCGCCTCTACCAAGGAACTATTCTCCTGTGGCTGGGCGTATCAAATGGTCTAGATGCCTAATGCAAAACATGATCGAGATTGTGGAAAGCGTCTGTGCTCATCCTGTCTTAAGAGGATTACCCGCATCCGCCGATATGATGCGGAAATATACTAACACTCGAACGTTAATGAACAACTATGAAGATATGATGAAAGCTGTTTGGATGAACCAGAATCTATGGGACGTAGACGAGAGTCTGAACAACTCCTTGTTGAAGATTGATGAAACCGGATGTGTGGCCGTGAACTTGGACAAAAATATCAAATTGTTGATCCGCGAATCGGATTGCCTCGTGAAAATGGGCGTTCCGCTACCAATCGTCTGTCACTCTTTGTACGCTAAAAAATATTATTTTACCCTCGTCAACGACTCCTTGCAGTTTCTGCTTGAAGATTATTTACGTACGGTCCGCCGTGTAAAACTAGAGGTTCGTCCTCTATTTCTGCCTCAAGTCGTACGCCTGTCCTCTCTTCTACTGCCCGGACTACGCAGCGTGTGCTGGACCAGCGAGGGCTGGAAAGAGTTCATCGACCGCGCCAACGCAGCCATCAAGAGCTTCGATGTTCTAGTGACGAGAGTACACGATATTTACACTAACAGAATTATTTACATGTTGTCCGGCATGCAAGAGGTTACCCTGATTACATTGCCGGAAGAAACACCATGGTCCGTTCAAGAATTCGTAGAGAAGGTCGAGTCTGGCTGTCGTAACGCTTGCGTTGAGCTAAATCGTAAGAGTCTGATGGTTGAAGAGGCTGTGGAAGAAGTATTGGATCTCGTAAAGAAGGCAGCCCAACAGATAAGACCGACAGAGATCAATCCAGATTTTGAATTTCTCATAGCTGAAGACGATCCCCAGAGCAGCGGCGCGGCGTCGTCCACGAATGAGTCTACGTCTAGTGGACAACAAGACTGGTCCGCTGTTTGGGAGTGCTTCGAAAGTCCTCATCGTCTACTGTCGACACCGGCCGGAGGTCTTTCCAAAAGCATGCAGGAAATGGTGAAGAATGCAGTGAATGAAATGCGTCGTTACTACAGTCGCAAGGTGGTCGACGTGCTCATCAGGGTCAAGAGGAGAACTCTCGACGTCATCATCAAGCAGTTCTCCTCCGACGCGCTTGCAACGGACGACGGTGAGTACCATTCTGTTCCATATTCAAATAACTTTGATTGTCGCACGTGA

Protein

MFKRQKDDPPLPRNYSPVAGRIKWSRCLMQNMIEIVESVCAHPVLRGLPASADMMRKYTNTRTLMNNYEDMMKAVWMNQNLWDVDESLNNSLLKIDETGCVAVNLDKNIKLLIRESDCLVKMGVPLPIVCHSLYAKKYYFTLVNDSLQFLLEDYLRTVRRVKLEVRPLFLPQVVRLSSLLLPGLRSVCWTSEGWKEFIDRANAAIKSFDVLVTRVHDIYTNRIIYMLSGMQEVTLITLPEETPWSVQEFVEKVESGCRNACVELNRKSLMVEEAVEEVLDLVKKAAQQIRPTEINPDFEFLIAEDDPQSSGAASSTNESTSSGQQDWSAVWECFESPHRLLSTPAGGLSKSMQEMVKNAVNEMRRYYSRKVVDVLIRVKRRTLDVIIKQFSSDALATDDGEYHSVPYSNNFDCRT

Uniprot

H9IY11   A0A212F9T1   A0A2A4IX12   A0A0L7KY44   A0A2H1VQV5   A0A2Z5U820   + More
E0W0Q7   K7J7S2   A0A232F2W8   A0A1B0GQ26   A0A195FIH3   A0A1B0GJY1   A0A0L7QTW2   A0A026WY55   A0A151J9E5   A0A151WTR8   A0A158P2P5   A0A182TAI5   A0A154PFK8   D6WIS3   A0A088AS19   E2CA47   A0A195D4P3   A0A2R7WNX1   E2AZZ0   A0A195BBY4   A0A1Q3FSZ1   A0A182FSH4   A0A1Q3FM85   A0A0J7L6K6   B0WIM3   A0A182QZT5   Q16UI0   A0A182RHW0   A0A1S4FNK9   A0A182YK77   A0A310SAR6   A0A182VQN9   A0A182MWN1   A0A182N569   A0A182JRZ0   A0A182PIC7   A0A182HJD6   Q7PTQ4   A0A182X1W7   A0A182VEN6   A0A182TQ18   A0A182LCP2   T1HLR4   A0A336LPD9   A0A182JFK1   A0A084W3D4   N6U4W8   U4U2X2   A0A0K8ULD1   A0A1I8M7D6   B3M1H1   A0A1I8PHL1   A0A1A9WJE8   A0A1W4W0B5   A0A1W4W0Z8   Q9VH97   A0A0B4K648   A0A0B4LH20   A0A0B4K614   B4PVC1   A0A3B0KP73   A0A0R1E219   A0A0R1E7J6   A0A0L0CCG7   A0A1B0G5G6   A0A1A9ZNV3   A0A0R3NQ41   A0A1A9VBD6   A0A0R3NNR0   A0A0R3NPI5   A0A0R3NJX4   B5DVH1   A0A0R3NJK3   A0A1J1ICX5   A0A0Q9X3M2   B4N841   B4M499   B4K645   A0A0Q9W1A9   B4JFF8   A0A0M4EJY3   A0A1B0C3G6   A0A1A9Y7F3   A0A2S2Q235   A0A2S2PXW6   J9JXN3   F4WDX4   A0A0M8ZZ88   B4QWI5   B4HJW0   B3NZN0  

Pubmed

19121390    22118469    26227816    20566863    20075255    28648823    + More
24508170    21347285    18362917    19820115    20798317    17510324    25244985    12364791    14747013    17210077    20966253    24438588    23537049    25315136    17994087    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    17550304    26108605    15632085    23185243    21719571   

EMBL

BABH01015967    BABH01015968    BABH01015969    AGBW02009564    OWR50497.1    NWSH01005052    + More
PCG64477.1    JTDY01004587    KOB67981.1    ODYU01003895    SOQ43221.1    AP017515    BBB06851.1    DS235862    EEB19213.1    AAZX01003355    AAZX01003361    AAZX01011149    NNAY01001113    OXU25094.1    AJVK01016013    KQ981523    KYN40198.1    AJWK01022437    AJWK01022438    AJWK01022439    KQ414736    KOC62093.1    KK107069    EZA60758.1    KQ979404    KYN21688.1    KQ982753    KYQ51236.1    ADTU01007305    KQ434893    KZC10625.1    KQ971321    EEZ99499.2    GL453920    EFN75202.1    KQ976885    KYN07399.1    KK855079    PTY20700.1    GL444289    EFN60993.1    KQ976530    KYM81709.1    GFDL01004377    JAV30668.1    GFDL01006315    JAV28730.1    LBMM01000498    KMQ98208.1    DS231950    EDS28578.1    AXCN02000174    CH477621    EAT38201.1    KQ765917    OAD53781.1    AXCM01003484    AXCM01003485    APCN01002153    AAAB01008794    EAA03542.6    ACPB03010558    ACPB03010559    UFQT01000100    SSX19932.1    ATLV01019918    ATLV01019919    ATLV01019920    KE525285    KFB44728.1    APGK01049735    APGK01049736    KB741156    ENN73607.1    KB631941    ERL87387.1    GDHF01024953    JAI27361.1    CH902617    EDV43262.2    AE014297    AAF54422.5    AFH06326.1    AHN57255.1    AFH06325.1    CM000160    EDW96694.2    OUUW01000014    SPP88419.1    KRK03304.1    KRK03303.1    JRES01000608    KNC29950.1    CCAG010000321    CM000070    KRT01088.1    KRT01087.1    KRT01085.1    KRT01086.1    KRT01084.1    EDY68486.3    KRT01083.1    CVRI01000047    CRK98135.1    CH964232    KRF99424.1    EDW81292.2    CH940652    EDW59460.2    CH933806    EDW14095.2    KRF78860.1    CH916369    EDV93439.1    CP012526    ALC45340.1    JXJN01024951    GGMS01002633    MBY71836.1    GGMS01001007    MBY70210.1    ABLF02035929    ABLF02035940    GL888096    EGI67606.1    KQ435816    KOX72633.1    CM000364    EDX13589.1    CH480815    EDW42844.1    CH954181    EDV49740.1   

Proteomes

UP000005204    UP000007151    UP000218220    UP000037510    UP000009046    UP000002358    + More
UP000215335    UP000092462    UP000078541    UP000092461    UP000053825    UP000053097    UP000078492    UP000075809    UP000005205    UP000075901    UP000076502    UP000007266    UP000005203    UP000008237    UP000078542    UP000000311    UP000078540    UP000069272    UP000036403    UP000002320    UP000075886    UP000008820    UP000075900    UP000076408    UP000075920    UP000075883    UP000075884    UP000075881    UP000075885    UP000075840    UP000007062    UP000076407    UP000075903    UP000075902    UP000075882    UP000015103    UP000075880    UP000030765    UP000019118    UP000030742    UP000095301    UP000007801    UP000095300    UP000091820    UP000192221    UP000000803    UP000002282    UP000268350    UP000037069    UP000092444    UP000092445    UP000001819    UP000078200    UP000183832    UP000007798    UP000008792    UP000009192    UP000001070    UP000092553    UP000092460    UP000092443    UP000007819    UP000007755    UP000053105    UP000000304    UP000001292    UP000008711   

PRIDE

H9IY11    Q9VH97   

Pfam

PF08385   DHC_N1        + More
PF08393   DHC_N2
PF18199   Dynein_C
PF17852   Dynein_AAA_lid
PF17857   AAA_lid_1
PF12777   MT
PF03028   Dynein_heavy
PF18198   AAA_lid_11
PF12780   AAA_8
PF12781   AAA_9
PF12774   AAA_6

Interpro

IPR026983   DHC_fam        + More
IPR013594   Dynein_heavy_dom-1       
IPR013602   Dynein_heavy_dom-2       
IPR004273   Dynein_heavy_D6_P-loop       
IPR041466   Dynein_AAA5_ext       
IPR003593   AAA+_ATPase       
IPR041228   Dynein_C       
IPR041658   AAA_lid_11       
IPR035699   AAA_6       
IPR035706   AAA_9       
IPR041589   DNAH3_AAA_lid_1       
IPR027417   P-loop_NTPase       
IPR024317   Dynein_heavy_chain_D4_dom       
IPR024743   Dynein_HC_stalk       

SUPFAM

SSF52540   SSF52540       

ProteinModelPortal

H9IY11   A0A212F9T1   A0A2A4IX12   A0A0L7KY44   A0A2H1VQV5   A0A2Z5U820   + More
E0W0Q7   K7J7S2   A0A232F2W8   A0A1B0GQ26   A0A195FIH3   A0A1B0GJY1   A0A0L7QTW2   A0A026WY55   A0A151J9E5   A0A151WTR8   A0A158P2P5   A0A182TAI5   A0A154PFK8   D6WIS3   A0A088AS19   E2CA47   A0A195D4P3   A0A2R7WNX1   E2AZZ0   A0A195BBY4   A0A1Q3FSZ1   A0A182FSH4   A0A1Q3FM85   A0A0J7L6K6   B0WIM3   A0A182QZT5   Q16UI0   A0A182RHW0   A0A1S4FNK9   A0A182YK77   A0A310SAR6   A0A182VQN9   A0A182MWN1   A0A182N569   A0A182JRZ0   A0A182PIC7   A0A182HJD6   Q7PTQ4   A0A182X1W7   A0A182VEN6   A0A182TQ18   A0A182LCP2   T1HLR4   A0A336LPD9   A0A182JFK1   A0A084W3D4   N6U4W8   U4U2X2   A0A0K8ULD1   A0A1I8M7D6   B3M1H1   A0A1I8PHL1   A0A1A9WJE8   A0A1W4W0B5   A0A1W4W0Z8   Q9VH97   A0A0B4K648   A0A0B4LH20   A0A0B4K614   B4PVC1   A0A3B0KP73   A0A0R1E219   A0A0R1E7J6   A0A0L0CCG7   A0A1B0G5G6   A0A1A9ZNV3   A0A0R3NQ41   A0A1A9VBD6   A0A0R3NNR0   A0A0R3NPI5   A0A0R3NJX4   B5DVH1   A0A0R3NJK3   A0A1J1ICX5   A0A0Q9X3M2   B4N841   B4M499   B4K645   A0A0Q9W1A9   B4JFF8   A0A0M4EJY3   A0A1B0C3G6   A0A1A9Y7F3   A0A2S2Q235   A0A2S2PXW6   J9JXN3   F4WDX4   A0A0M8ZZ88   B4QWI5   B4HJW0   B3NZN0  

KEGG

101745445    K10408 dynein heavy chain, axonemal | (RefSeq) dynein heavy chain 5, axonemal-like

GO

GO:0007018   GO:0003777   GO:0005524   GO:0030286   GO:0036158   GO:0045503   GO:0051959   GO:0008569   GO:0036157   GO:0045505   GO:0016887   GO:0042623   GO:0003341   GO:0007605   GO:0016021  

PANTHER

PTHR10676  

Length:

415

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01845

Exp number, first 60 AAs:

0.00683

Total prob of N-in:

0.01225

outside

1  -  415

 

 

Pi

6.321136

Theta

22.926403

Tajima's D

-2.032626

CLR

0.00809

CSRT

0.0107994600269987

Interpretation

Uncertain