Gene

KWMTBOMO00137

Annotation

PREDICTED:_arf-GAP_with_Rho-GAP_domain?_ANK_repeat_and_PH_domain-containing_protein_2_[Bombyx_mori]

Location

Bomo_Chr1(+):4311959-4339684      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 2.315

CDS

ATGGAACTTGTACATCACGTTCGACCTTTGAATCTGTATGCTTGTCTACAGGAAGGGGTATCCGGAGAATGGCGTGGCGCTTGGCTGATACTTGTACGACGTGTCTTAGTCTACACGACCAAAGACTCTAATGTATGCACCGTAGATCTTAGGAAGACAAGATGTGTCGTAACTCAAGATGCCGATGATGAGAGCAAACAGTTGTGTCCGGCGGATTGCAGCAGCAATCTGTTGTTGGATTGTCCCCACACAACTCTTTATTTAAGATTCCCGCACGATCGAGAATTAAAGGGCTGGCGATACATGATCAAGTTGGCGTCTTACAATAACGGTTCACATATACATCACCAGCAGCTCACCAAAGAGGACGTGCCGGCCGTCGTCGACAAATGCCTAAGTTTTATTTACGCTCACGATTAG

Protein

MELVHHVRPLNLYACLQEGVSGEWRGAWLILVRRVLVYTTKDSNVCTVDLRKTRCVVTQDADDESKQLCPADCSSNLLLDCPHTTLYLRFPHDRELKGWRYMIKLASYNNGSHIHHQQLTKEDVPAVVDKCLSFIYAHD

Uniprot

A0A2A4JJ61   A0A212F9S2   A0A194QZU8   A0A194QAY3   V5GFT9   A0A1W4XRT0   + More
A0A1Y1L1F6   D6WE41   N6TD68   U4UVV5   A0A0T6BA68   A0A0L7K3X9   A0A2P8YAZ8   A0A2J7QZA1   A0A1B0FYB8   A0A1B6F9K0   A0A1B6C426   A0A1B6MRT4   A0A1B6LEB6   A0A1B6EQL3   A0A1B6MF42   A0A1B6KCU6   A0A1B0CEA4   A0A182H3M4   A0A2M4BCS2   A0A2M4BBG4   A0A2M4B8W4   A0A2M4B8R9   A0A2M4B8R8   A0A2S2PZW9   A0A1S4F5Y7   A0A0L0BT30   W5JMW8   A0A2S2QZW1   J9K1U7   Q17EB0   A0A182FJX9   A0A0P6IVV9   A0A1I8M272   A0A2M3Z3V4   A0A2M4BB80   A0A0K8TX96   W8AB86   A0A2M3ZGM3   A0A0K8VJ81   A0A2M4BAU3   A0A2S2NUS8   B3N0B3   T1PPN4   A0A0P9AHP2   A0A2M4A1G9   A0A034VI84   A0A034VFJ1   A0A0Q5TJ75   A0A0R1EBN8   A0A1W4VX72   B3NWA5   B4Q244   A0A1W4VJ66   A0A0R1EID4   A0A3B0JC40   Q0KHR5   A0A0Q9WM97   Q9VX92   A0A2M4A3V9   A0A2M4A3W7   A0A0M3QZA5   Q8T3K2   A0A182RVU4   B4L227   A0A0Q9WCP4   A0A1I8Q100   B4JN51   A0A3B0JRL9   A0A3B0JZF3   A0A3B0JDC2   B4IEV9   B4NE16   A0A1J1HH09   A0A2H8TH91   A0A1A9YF25   A0A1A9VUL1   B4M1K3   A0A1B0A0W8   A0A182QF15   A0A1B0FD19   A0A0R3P7C3   Q29FL8   B4HA30   A0A1B6H8G0   A0A1B6IHX6   A0A182T275   A0A1S4ESY4   A0A182YMX1   A0A182PTU5   A0A1A9W648   A0A182MHV8   A0A182W429   A0A182K8D2   A0A182NAF9  

Pubmed

22118469    26354079    28004739    18362917    19820115    23537049    + More
26227816    29403074    26483478    17510324    26108605    20920257    23761445    26999592    25315136    24495485    17994087    18057021    25348373    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    15632085    25244985   

EMBL

NWSH01001204    PCG72135.1    AGBW02009564    OWR50495.1    KQ461108    KPJ09116.1    + More
KQ459463    KPJ00581.1    GALX01005622    JAB62844.1    GEZM01070890    JAV66230.1    KQ971318    EFA00372.1    APGK01042753    KB741007    ENN75648.1    KB632385    ERL94330.1    LJIG01002714    KRT84226.1    JTDY01011299    KOB57055.1    PYGN01000743    PSN41421.1    NEVH01009072    PNF33895.1    AJVK01001012    AJVK01001013    AJVK01001014    GECZ01022870    JAS46899.1    GEDC01029308    JAS07990.1    GEBQ01001382    JAT38595.1    GEBQ01017961    JAT22016.1    GECZ01029535    GECZ01013369    GECZ01009669    GECZ01000977    JAS40234.1    JAS56400.1    JAS60100.1    JAS68792.1    GEBQ01005399    JAT34578.1    GEBQ01030698    JAT09279.1    AJWK01008702    AJWK01008703    AJWK01008704    AJWK01008705    AJWK01008706    AJWK01008707    JXUM01024585    JXUM01024586    JXUM01024587    JXUM01024588    GGFJ01001681    MBW50822.1    GGFJ01001253    MBW50394.1    GGFJ01000332    MBW49473.1    GGFJ01000250    MBW49391.1    GGFJ01000251    MBW49392.1    GGMS01001786    MBY70989.1    JRES01001383    KNC23235.1    ADMH02000920    ETN64663.1    GGMS01014062    MBY83265.1    ABLF02023675    ABLF02023676    ABLF02023677    CH477284    EAT44768.1    GDUN01000807    JAN95112.1    GGFM01002439    MBW23190.1    GGFJ01001100    MBW50241.1    GDHF01033416    JAI18898.1    GAMC01021445    JAB85110.1    GGFM01006945    MBW27696.1    GDHF01013392    JAI38922.1    GGFJ01000787    MBW49928.1    GGMR01008285    MBY20904.1    CH902640    EDV38317.1    KPU77361.1    KA650023    AFP64652.1    KPU77360.1    GGFK01001274    MBW34595.1    GAKP01017709    JAC41243.1    GAKP01017718    JAC41234.1    CH954180    KQS29974.1    CM000162    KRK06827.1    EDV46444.1    EDX02552.2    KRK06826.1    OUUW01000003    SPP78113.1    AE014298    ABI30987.1    CH933810    KRF93807.1    AAF48686.3    GGFK01002172    MBW35493.1    GGFK01002124    MBW35445.1    CP012528    ALC49083.1    AY094969    AAM11322.1    EDW06767.2    CH940651    KRF82282.1    CH916371    EDV92144.1    SPP78110.1    SPP78111.1    SPP78112.1    CH480832    EDW46213.1    CH964239    EDW81985.2    CVRI01000004    CRK87304.1    GFXV01001585    MBW13390.1    EDW65557.2    AXCN02002022    CCAG010018887    CH379066    KRT07331.1    EAL31382.3    CH479235    EDW36698.1    GECU01036747    JAS70959.1    GECU01021177    JAS86529.1    AXCM01003334   

Proteomes

UP000218220    UP000007151    UP000053240    UP000053268    UP000192223    UP000007266    + More
UP000019118    UP000030742    UP000037510    UP000245037    UP000235965    UP000092462    UP000092461    UP000069940    UP000037069    UP000000673    UP000007819    UP000008820    UP000069272    UP000095301    UP000007801    UP000008711    UP000002282    UP000192221    UP000268350    UP000000803    UP000009192    UP000092553    UP000075900    UP000008792    UP000095300    UP000001070    UP000001292    UP000007798    UP000183832    UP000092443    UP000078200    UP000092445    UP000075886    UP000092444    UP000001819    UP000008744    UP000075901    UP000079169    UP000076408    UP000075885    UP000091820    UP000075883    UP000075920    UP000075881    UP000075884   

PRIDE

Q0KHR5    Q9VX92    Q8T3K2   

Pfam

PF00169   PH        + More
PF00620   RhoGAP
PF00788   RA
PF00595   PDZ
PF06218   NPR2

Interpro

IPR011993   PH-like_dom_sf        + More
IPR001849   PH_domain       
IPR000198   RhoGAP_dom       
IPR008936   Rho_GTPase_activation_prot       
IPR029071   Ubiquitin-like_domsf       
IPR037858   RhoGAP_ARAP       
IPR000159   RA_dom       
IPR001478   PDZ       
IPR036034   PDZ_sf       
IPR009348   NPR2       

SUPFAM

SSF48350   SSF48350        + More
SSF54236   SSF54236       
SSF50156   SSF50156       

Gene 3D

1.10.555.10     2.30.29.30    

CDD

cd04385  RhoGAP_ARAP

ProteinModelPortal

A0A2A4JJ61   A0A212F9S2   A0A194QZU8   A0A194QAY3   V5GFT9   A0A1W4XRT0   + More
A0A1Y1L1F6   D6WE41   N6TD68   U4UVV5   A0A0T6BA68   A0A0L7K3X9   A0A2P8YAZ8   A0A2J7QZA1   A0A1B0FYB8   A0A1B6F9K0   A0A1B6C426   A0A1B6MRT4   A0A1B6LEB6   A0A1B6EQL3   A0A1B6MF42   A0A1B6KCU6   A0A1B0CEA4   A0A182H3M4   A0A2M4BCS2   A0A2M4BBG4   A0A2M4B8W4   A0A2M4B8R9   A0A2M4B8R8   A0A2S2PZW9   A0A1S4F5Y7   A0A0L0BT30   W5JMW8   A0A2S2QZW1   J9K1U7   Q17EB0   A0A182FJX9   A0A0P6IVV9   A0A1I8M272   A0A2M3Z3V4   A0A2M4BB80   A0A0K8TX96   W8AB86   A0A2M3ZGM3   A0A0K8VJ81   A0A2M4BAU3   A0A2S2NUS8   B3N0B3   T1PPN4   A0A0P9AHP2   A0A2M4A1G9   A0A034VI84   A0A034VFJ1   A0A0Q5TJ75   A0A0R1EBN8   A0A1W4VX72   B3NWA5   B4Q244   A0A1W4VJ66   A0A0R1EID4   A0A3B0JC40   Q0KHR5   A0A0Q9WM97   Q9VX92   A0A2M4A3V9   A0A2M4A3W7   A0A0M3QZA5   Q8T3K2   A0A182RVU4   B4L227   A0A0Q9WCP4   A0A1I8Q100   B4JN51   A0A3B0JRL9   A0A3B0JZF3   A0A3B0JDC2   B4IEV9   B4NE16   A0A1J1HH09   A0A2H8TH91   A0A1A9YF25   A0A1A9VUL1   B4M1K3   A0A1B0A0W8   A0A182QF15   A0A1B0FD19   A0A0R3P7C3   Q29FL8   B4HA30   A0A1B6H8G0   A0A1B6IHX6   A0A182T275   A0A1S4ESY4   A0A182YMX1   A0A182PTU5   A0A1A9W648   A0A182MHV8   A0A182W429   A0A182K8D2   A0A182NAF9  

PDB

5JCP     E-value=0.031419,     Score=80

KEGG

101745159    no KO assigned | (RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 2

GO

GO:0005096   GO:0007165   GO:0005547   GO:0007480   GO:0043547   GO:0005794   GO:0043087  

Length:

139

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.02767

Exp number, first 60 AAs:

0.02767

Total prob of N-in:

0.06444

outside

1  -  139

 

 

Pi

25.199185

Theta

18.356369

Tajima's D

-2.184195

CLR

0.044934

CSRT

0.00529973501324934

Interpretation

Uncertain