Gene

KWMTBOMO00127

Pre Gene Modal

BGIBMGA002138

Annotation

PREDICTED:_CUB_and_sushi_domain-containing_protein_2_[Amyelois_transitella]

Location

Bomo_Chr1(+):3917786-3952040      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 3.369

CDS

ATGCTCTACAACATAATATTTTGCTCTACCGCCGCAACCAAGTCTTCTCCAACAACGCTAGAATAGCGTCGCTGTGGTCATCCTGCAGTACCGCCAAACGCAAGAGTATCAATACCCAATGAAGAAAACATCGTTGCTGGAACCATAGCCGTCTATGAATGCGACGAAGGATATGAACTGTTCGGAGCTCGCCAGCGGGAGTGCACCTTAAGAGGAGACTGGACCCTAGAACCGCCTTTCTGTGGAACGAATGTGGCCTTCAGGAAGCCTGCCAATCAGTCTACAACGGTTCGAGGAGGTGCAGCAGCTAATGGCAACGATGGAGAGAAAACCACTGAGCATGACCGCAAGAGGTGCACGGAGACACAGCGAGAAGCGTCTCCGTGGTGGCAAGTTGATCTGCTCAGGCATTATGCTATCAAGGTCGTCAGGGTCACAACACGAGGCTGCTGTGGCCATCAACCTCTTCAAGAGTTGGAGATCAGAGTCGGAAACAGCAGTTCTGACCTCCAGCGGAACCCTCTATGTGCCTGGTTTCCTGGAACTATTGACGAAGGCGTTACGAAAACGTTCACGTGCGCTCGACCTCTGATCGGGCAGCACGTGTTTCTGCAACTGGTTGGTGTCGAGGGCTCCTTATCGCTTTGCGAAGTTGAAGTTTTTACAACAGAAGAATTTTCGAACGATCGATGCGCTCCGGCCGGCGCCCCCGCTGATATTGAATTGGCTGCGTTCTCCAGAAACTGTTATGAGTTCAACGTTGCCAGGGGGGGCTCGTTCGACGAAGCCAGGAAGCAATGTCAATCACATGGTGGCGATTTAATACACGGCTTTCAGGGTGCCACGTCGAGTTTCCTCACTCAAGAACTGGAGCGTCGTAAAGCACAGTTAAAAACACAGTTGGTCTGGATCGGAGCCCAAAAGGAGCCGGGCCTCACATCTCGAACCTGGCAATGGGTGGATGGCGAATTAGTTTCGAAGCCGAGCTGGGGTAAAGACCAGCCTAATAATTACAACGGGGAACAGAACTGCGTTGTCCTGGACGGCGGGAGAGGCTGGTTGTGGAACGACGTTGGCTGCAACCTCGATTACTTGCACTGGATCTGCCAGTACCTGCCTCCCACGTGCGGCAGTCCGGATAAACTACTGAATACTACCATACTCGGAAACGATTATGATGTTGGATCAAGAATTGTCTACAAGTGCCCCGAAGGTCATATGTTGCTCGGCGACAAAAGCAGGCACTGCAAGAAAGACGGGTTCTGGTCTGGAGCACCTCCCAGCTGTAAATATGTAAATTGTGGGGGTCTAACGCCGATCGAAGACGGAGATGTGGCTCTTATTGACAACAGAACAACCCACGGGGCTAGAGCTCTTTACTCCTGCCGCGAAAACTTCACCTTAGTCGGAAACCCTGAAAGAACCTGCGGTGATGAAGGTATTTGGGATGGAGAGGCTCCGAGATGCCTGTTCGACTGGTGTCCCGATCCTCCCGCCGTCTCCAACGCCTCAGTGACTGTCAATGGACACAAAGCGGGTTCTTTGGCTTCGTATACGTGTGAAAATGGCCATATTCTTTCCGGGTCAACGAGCGTCACTTGCACCCTCGGTGGTGCTTGGTCAGGAGTACCTCCGTCCTGTAAATACGTCAACTGTGGAACCCCGACAATTCACAAGGGCTCTTTTGTACTCATCAACGGAACCACCACATATGGCTCCATTGCCCAGTTCACATGCGAGCCCGACTACTGGTTGAACGGAGCTGAAGAGCTGGTTTGCAATAGGGACGGCAAGTGGTCGTATGACATCCCATCTTGTGAATTGACATCGTGTCCAGAGCCAGAAGTACCTTCCGGCGGTTACATGGAGGCTTTCGATTACTACGTGCACTCAACAATAAACTTCCACTGCGAAGCGGGACATAAGCTGATAGGGGAACCCAATCTCGTTTGCCAGCAAGACGGAGAATGGTCAGGGGATTCGCCGACATGTGAATATATCGATTGCGGGAAATTGCCAACATTGCCGTACGGCACAATGGAACTGTTAAACGGAACGACCCACCTGGGAAGCGTCATTCAGTACTCATGCACGACCAACTACAGACTTGTTGGTCCAGTAAGGAGGACCTGCACCGAAGAATTTCAATGGAGCGATTCTTCGCCCAGATGTGAAGAAATCCGATGTTCCGATCCGATAGTGGCCGAGAAGAGCATAGTATCCGTGACCGGTAACGATAGGAGCCATGGGCACACGCTGATCAGGACGTCTGACAACAGAGACGTCGGAAACACTTACCGTATTGGAGCGCTTGTGAAGTACAGATGTGAGAAAGGATACAAAGTGATCGGAGAGAGCTTATCGACTTGTGAAGATAATGGACAGTGGAGTGGAACAACGCCAACCTGCCAATACGTCGACTGCGGCAATCCAGGACGAATCGAGAATGGCAAAGTGACTCTTCCATCGAACGCCACATTCTATGGGGCCACCGCTTTCTACCAATGTGATGAAAACTGGGAGCTGGAGGGCGTGATCAGGAGAATGTGCCAAGAGAATGGGACTTGGAGTTTGGAGCCTCCCATTTGCAAAGAGATCACCTGCCCGGACCCATCGGCCCAAATCAAGGCCGGATCTGGTCTGTTAGTTGTTACGTCGACCCTCAGCATTGGGGGAGAGGCCCATTACCAGTGCGAGAGAGGTTACAACCTCAAAGGTCACCAGACAAGAACCTGCATATCGAAAGGACAGTGGAATGGAACTGTGCCTGTTTGCATACCAATCGACTGTAGGTCACCGGGAAATATAGAGAACGGTAAAATCGTCATCTCTAACGGCTCCACGCTGTTCGGAAGCTCCGTGGAATATTACTGTCTATCCCAATACCAGCGAGTTGGACCTTTCTTGAGAAAGTGTCTGGATGACGGTCGCTGGTCGGGTGAAGAGCCAAGCTGTGAACTAGCGACCAACGAGGCTGTGGACAGTGGAACTCTGCCCCTAAGTGTTGGGGTCGGGTGTGGAGTGGTCCTGTTCCTACTGATGCTTCTAGGAATCGTTTATCTGAGGCTACGGAAAGCAACGCCTGTTAAGAACACGGAAAACATTGAGGGCGCCGAGCGAAAGGAAGATCAGAGCGCGGCGGTGATGAGCTACGCCACGTTGCACGACGCCAGCGGACGCCACATCTACGACCACGTTTCTGACAACGTGTACGACTCGCCTTACAGCGAACAGATAACTGACAACGTCGCGTACGGCAGACGAGGCGACACCGACTCCGCCTACGAGCCAGAGCCGACCGGACCCAATGCTGTCATCACCATCAACGGAGTCGCGGTGCGTTGA

Protein

MLYNIIFCSTAATKSSPTTLEXRRCGHPAVPPNARVSIPNEENIVAGTIAVYECDEGYELFGARQRECTLRGDWTLEPPFCGTNVAFRKPANQSTTVRGGAAANGNDGEKTTEHDRKRCTETQREASPWWQVDLLRHYAIKVVRVTTRGCCGHQPLQELEIRVGNSSSDLQRNPLCAWFPGTIDEGVTKTFTCARPLIGQHVFLQLVGVEGSLSLCEVEVFTTEEFSNDRCAPAGAPADIELAAFSRNCYEFNVARGGSFDEARKQCQSHGGDLIHGFQGATSSFLTQELERRKAQLKTQLVWIGAQKEPGLTSRTWQWVDGELVSKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCNLDYLHWICQYLPPTCGSPDKLLNTTILGNDYDVGSRIVYKCPEGHMLLGDKSRHCKKDGFWSGAPPSCKYVNCGGLTPIEDGDVALIDNRTTHGARALYSCRENFTLVGNPERTCGDEGIWDGEAPRCLFDWCPDPPAVSNASVTVNGHKAGSLASYTCENGHILSGSTSVTCTLGGAWSGVPPSCKYVNCGTPTIHKGSFVLINGTTTYGSIAQFTCEPDYWLNGAEELVCNRDGKWSYDIPSCELTSCPEPEVPSGGYMEAFDYYVHSTINFHCEAGHKLIGEPNLVCQQDGEWSGDSPTCEYIDCGKLPTLPYGTMELLNGTTHLGSVIQYSCTTNYRLVGPVRRTCTEEFQWSDSSPRCEEIRCSDPIVAEKSIVSVTGNDRSHGHTLIRTSDNRDVGNTYRIGALVKYRCEKGYKVIGESLSTCEDNGQWSGTTPTCQYVDCGNPGRIENGKVTLPSNATFYGATAFYQCDENWELEGVIRRMCQENGTWSLEPPICKEITCPDPSAQIKAGSGLLVVTSTLSIGGEAHYQCERGYNLKGHQTRTCISKGQWNGTVPVCIPIDCRSPGNIENGKIVISNGSTLFGSSVEYYCLSQYQRVGPFLRKCLDDGRWSGEEPSCELATNEAVDSGTLPLSVGVGCGVVLFLLMLLGIVYLRLRKATPVKNTENIEGAERKEDQSAAVMSYATLHDASGRHIYDHVSDNVYDSPYSEQITDNVAYGRRGDTDSAYEPEPTGPNAVITINGVAVR

Uniprot

H9IY05   A0A194QUA4   A0A194Q4W1   A0A2A4K0P2   A0A212F9V1   A0A219YXI7   + More
A0A2H1WY99   A0A1V1FYC5   D6WIC1   A0A2A3EGS2   E2BVC7   E2ASL9   A0A195BZZ9   A0A0L7QSA9   A0A088AU37   A0A154NYR3   A0A1S4MZJ1   A0A0N0BJ10   A0A195F0U9   A0A195EGB6   A0A151XBK3   A0A146M788   A0A158NL28   A0A195BHB5   A0A0C9QVS0   A0A1B6G943   F4WFY7   E0VZV6   A0A0C9RHU4   A0A0K8SU93   K7IN02   A0A232FA27   T1HQV6   A0A067R1P5   A0A1B0CZ92   A0A2J7RKX7   A0A2H8TPR4   A0A2S2NGM5   A0A0L0BT81   J9JRW4   T1P8S0   A0A0K8VIV7   A0A1I8PKJ5   A0A0K8VMI0   A0A034V0Z7   A0A1I8MCU6   W8AQB1   A0A182UU82   A0A182IDJ5   A0A182WRB3   A0A1S4GAG1   Q7QI37   A0A182RKB4   A0A084WPQ7   A0A182KFP5   A0A182NVF0   A0A1B0FNU2   A0A182VT36   A0A1A9W649   A0A1A9VUL7   A0A182FK45   A0A182QIU9   A0A182MSV8   A0A182PL41   A0A182YQ35   A0A2M4CHZ4   B3NXM9   A0A182J2C0   A0A1J1IPH3   B4PYN4   B4L1H8   B4ILA4   Q9VYR4   B5DNH9   A0A3B0KQ61   A0A0M4FB02   A0A1W4VUG9   A0A1W4VTQ8   B4M234   A0A1W4VH46   A0A1B0A0W9   N6UB14   B3N0R0   B4ND16   A0A026WXD4   Q16XC0   B4JIR0   A0A224XJS3   W5JFD4   A0A1A9YF17   A0A0A9Y606   A0A1B0AMS5   A0A3L8D808   B4H0Z0   A0A1B6DUN5   A0A336K2F8   A0A1Y1MWR4   A0A2P8YK25   A0A147BFW2  

Pubmed

19121390    26354079    22118469    28410430    18362917    19820115    + More
20798317    20566863    26823975    21347285    21719571    20075255    28648823    24845553    26108605    25348373    25315136    24495485    12364791    24438588    25244985    17994087    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    15632085    23537049    24508170    17510324    20920257    23761445    25401762    30249741    28004739    29403074   

EMBL

BABH01015930    BABH01015931    KQ461108    KPJ09108.1    KQ459463    KPJ00573.1    + More
NWSH01000275    PCG77845.1    AGBW02009564    OWR50489.1    KX550143    AQY54460.1    ODYU01011554    SOQ57364.1    FX985256    BAX07269.1    KQ971321    EFA01446.2    KZ288255    PBC30674.1    GL450824    EFN80419.1    GL442330    EFN63579.1    KQ978501    KYM93483.1    KQ414758    KOC61518.1    KQ434783    KZC04763.1    AAZO01006540    AAZO01006541    AAZO01006542    AAZO01006543    AAZO01006544    KQ435724    KOX78438.1    KQ981866    KYN34103.1    KQ978957    KYN26934.1    KQ982320    KYQ57755.1    GDHC01003330    JAQ15299.1    ADTU01019226    ADTU01019227    ADTU01019228    KQ976488    KYM83544.1    GBYB01007834    JAG77601.1    GECZ01010797    JAS58972.1    GL888128    EGI66754.1    DS235854    EEB18912.1    GBYB01007835    JAG77602.1    GBRD01008948    JAG56873.1    NNAY01000629    OXU27309.1    ACPB03023230    KK852985    KDR12825.1    AJVK01002143    AJVK01002144    AJVK01002145    AJVK01002146    NEVH01002704    PNF41493.1    GFXV01004194    MBW15999.1    GGMR01003463    MBY16082.1    JRES01001383    KNC23231.1    ABLF02032708    KA645072    AFP59701.1    GDHF01013488    JAI38826.1    GDHF01012579    JAI39735.1    GAKP01022002    GAKP01022001    JAC36951.1    GAMC01018303    GAMC01018302    JAB88252.1    APCN01004705    APCN01004706    APCN01004707    AAAB01008811    EAA04956.3    ATLV01025119    KE525369    KFB52201.1    CCAG010009643    AXCN02002011    AXCM01003211    GGFL01000788    MBW64966.1    CH954180    EDV47330.2    CVRI01000055    CRL01626.1    CM000162    EDX00970.1    CH933810    EDW07614.2    CH480868    EDW53750.1    AE014298    BT003214    AAF48125.2    AAO24969.1    AHN59616.1    CH379064    EDY72987.2    OUUW01000015    SPP88759.1    CP012528    ALC49695.1    CH940651    EDW65738.2    APGK01041924    APGK01041925    KB740998    ENN75827.1    CH902644    EDV34789.2    CH964239    EDW82725.2    KK107078    EZA60406.1    CH477543    EAT39254.2    CH916370    EDW00507.1    GFTR01008155    JAW08271.1    ADMH02001566    ETN62048.1    GBHO01016543    JAG27061.1    JXJN01000557    QOIP01000011    RLU16414.1    CH479201    EDW29906.1    GEDC01007916    JAS29382.1    UFQS01000005    UFQT01000005    SSW96933.1    SSX17320.1    GEZM01021615    JAV88905.1    PYGN01000541    PSN44564.1    GEGO01005753    JAR89651.1   

Proteomes

UP000005204    UP000053240    UP000053268    UP000218220    UP000007151    UP000007266    + More
UP000242457    UP000008237    UP000000311    UP000078542    UP000053825    UP000005203    UP000076502    UP000053105    UP000078541    UP000078492    UP000075809    UP000005205    UP000078540    UP000007755    UP000009046    UP000002358    UP000215335    UP000015103    UP000027135    UP000092462    UP000235965    UP000037069    UP000007819    UP000095300    UP000095301    UP000075903    UP000075840    UP000076407    UP000007062    UP000075900    UP000030765    UP000075881    UP000075884    UP000092444    UP000075920    UP000091820    UP000078200    UP000069272    UP000075886    UP000075883    UP000075885    UP000076408    UP000008711    UP000075880    UP000183832    UP000002282    UP000009192    UP000001292    UP000000803    UP000001819    UP000268350    UP000092553    UP000192221    UP000008792    UP000092445    UP000019118    UP000007801    UP000007798    UP000053097    UP000008820    UP000001070    UP000000673    UP000092443    UP000092460    UP000279307    UP000008744    UP000245037   

PRIDE

H9IY05   

Pfam

PF00059   Lectin_C        + More
PF00084   Sushi
PF00754   F5_F8_type_C
PF13405   EF-hand_6

Interpro

IPR018378   C-type_lectin_CS        + More
IPR008979   Galactose-bd-like_sf       
IPR016187   CTDL_fold       
IPR000436   Sushi_SCR_CCP_dom       
IPR016186   C-type_lectin-like/link_sf       
IPR035976   Sushi/SCR/CCP_sf       
IPR001304   C-type_lectin-like       
IPR006585   FTP1       
IPR000421   FA58C       
IPR001879   GPCR_2_extracellular_dom       
IPR002048   EF_hand_dom       
IPR011992   EF-hand-dom_pair       
IPR018247   EF_Hand_1_Ca_BS       
IPR007110   Ig-like_dom       

SUPFAM

SSF56436   SSF56436        + More
SSF57535   SSF57535       
SSF49785   SSF49785       
SSF47473   SSF47473       

Gene 3D

2.60.120.260     3.10.100.10    

CDD

cd00033  CCP
cd00051  EFh

ProteinModelPortal

H9IY05   A0A194QUA4   A0A194Q4W1   A0A2A4K0P2   A0A212F9V1   A0A219YXI7   + More
A0A2H1WY99   A0A1V1FYC5   D6WIC1   A0A2A3EGS2   E2BVC7   E2ASL9   A0A195BZZ9   A0A0L7QSA9   A0A088AU37   A0A154NYR3   A0A1S4MZJ1   A0A0N0BJ10   A0A195F0U9   A0A195EGB6   A0A151XBK3   A0A146M788   A0A158NL28   A0A195BHB5   A0A0C9QVS0   A0A1B6G943   F4WFY7   E0VZV6   A0A0C9RHU4   A0A0K8SU93   K7IN02   A0A232FA27   T1HQV6   A0A067R1P5   A0A1B0CZ92   A0A2J7RKX7   A0A2H8TPR4   A0A2S2NGM5   A0A0L0BT81   J9JRW4   T1P8S0   A0A0K8VIV7   A0A1I8PKJ5   A0A0K8VMI0   A0A034V0Z7   A0A1I8MCU6   W8AQB1   A0A182UU82   A0A182IDJ5   A0A182WRB3   A0A1S4GAG1   Q7QI37   A0A182RKB4   A0A084WPQ7   A0A182KFP5   A0A182NVF0   A0A1B0FNU2   A0A182VT36   A0A1A9W649   A0A1A9VUL7   A0A182FK45   A0A182QIU9   A0A182MSV8   A0A182PL41   A0A182YQ35   A0A2M4CHZ4   B3NXM9   A0A182J2C0   A0A1J1IPH3   B4PYN4   B4L1H8   B4ILA4   Q9VYR4   B5DNH9   A0A3B0KQ61   A0A0M4FB02   A0A1W4VUG9   A0A1W4VTQ8   B4M234   A0A1W4VH46   A0A1B0A0W9   N6UB14   B3N0R0   B4ND16   A0A026WXD4   Q16XC0   B4JIR0   A0A224XJS3   W5JFD4   A0A1A9YF17   A0A0A9Y606   A0A1B0AMS5   A0A3L8D808   B4H0Z0   A0A1B6DUN5   A0A336K2F8   A0A1Y1MWR4   A0A2P8YK25   A0A147BFW2  

PDB

2Q7Z     E-value=3.41856e-53,     Score=531

KEGG

101737840    no KO assigned | (RefSeq) sushi, von Willebrand factor type A, EGF and pentraxin domain-containing p

GO

GO:0016021   GO:0030246   GO:0016787   GO:0004930   GO:0005509   GO:0042067   GO:0035317   GO:0043296   GO:0050821   GO:0007156   GO:0007423   GO:0007476  

Length:

1114

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

22.56444

Exp number, first 60 AAs:

0.00019

Total prob of N-in:

0.00003

outside

1  -  998

TMhelix

999  -  1021

inside

1022  -  1114

 

 

Pi

26.06811

Theta

23.646185

Tajima's D

-1.305989

CLR

0.019141

CSRT

0.0875456227188641

Interpretation

Uncertain