Silkworm Genome Informatics Database

Gene

KWMTBOMO00123 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA002136

Annotation

Uncharacterized_protein_OBRU01_18498_[Operophtera_brumata]

Location

Bomo_Chr1(+):3790846-3794222 View in EpiBrowser

Location in the cell

PlasmaMembrane Reliability : 2.443

CDS

ATGGTCATGTATATTTCAAGGCTTAAGGAAATAGTCATAATAAGCTGGATTATTGACGTAAGTCTATCAAAAAAACCTCGGAGCAAAAGACAACAAGAAATATGGCGAGTAGAGTGCGAAATAGGTATCATCTCCGATCCCGAGTGTCCTGTAGATGGCGGTTGGTCGCCGTGGAGTTCATGGTCCCCATGTTACGGATCATGTGATCAACTGGGTCATCAGCGCAGATACAGAGAGTGTAACAACCCGCCACCCTTCGAAGATGGAATCATGTGCAGTGGTGAAGCAGAACAAATTCGGTCATGCTACTTAACAAACTGTACGGTCAACGACTATAAAGAGCTGATCAAAGGTGATGCGATTAGGAACGATGCTTTCAGGCACTTAGAAACCGTACCGTCTCTTATGGAACGATGTCTCCAGACGGAATGTCCGTTTGAGGCAATAGACGTAGCACTTAATGCGGACAATACTTGGCAACTAAATGCTGAAGCATTATGGAATTCGCTGCAATGTGTGAAACATAATATGGGCTGTCCTATTATTGGGGAGTGGAGCGCTTGGGGAACTTGGTCATCCTGCGGCGCTCGTTGTGGCCACGGCTTCAGATGGAGACTGAGACGATGTGACGCACCACCACCTTCAGAAGCTCTTCTCATTTGCTCGGGATACCCATTACAAACTGATGAATGCGTCGGTGATCAGTGTGCTATTGACATACGTAATTCTAATGGCGCATGGGGTGAGTGGTCACCTTGGACTGCATGTTCGGAAAGTTGTGGCATTGGTCTAAGACGCCGCCGACGTTCTTGTTTAGAAATGCGCACGCCAATATCTACTAGCACATGGGGAACTCATTGTAAAGGACAACACGATGAATTAGAAATGTGTGAAAACAAAAAATGTTCGTTAAATGGAGGATGGTCTGGCTGGGGTCCTTGGGGACCGTGTTCCCAAACATGTGGAGCAGGCAGAAGATCAAGATCAAGATCATGCACGAGACCTATTCCCGCTGGCAACGGTTCCCCTTGTATGGGGCAACGTACAGAAATAGGATCTTGTCACATGTTACCTTGTAATGCTTACACACATGTCGTCGCTTTATTTAATGGCGACTCTAGTATACAGTACAATTTTGCCAACATGCATTCAACGTTATTCCATTTCTACATAAGATTCTTGCCAATATCTCCACATGGCACTTTAGTGCGTAGAGGAACATTACATGGCCCCTACGTGCGTTTGAGCCTACAAACATGGCACATTTGCTTAGATGCCAGTGGACTCGCACCATCTTGTAGTTTACCTCGAATTTGTAGCCATTCCGTTATCGAACCAGCCGTGTGGCATTCTGTTCTCGTGACTGTAACTAACGAAGCTGCGACTCTGAGGTTAGATGACTCGCCAGTTACACTAAAAAACACGTTTCCCTGTGATCCGGATCTTCCCAATGATGAAGTCGAAGAAATTATAGTCGGTGAGAGATTTCACGGTGAAGTTCAAGAACTCATATTAAATTTCATGCCTCTTCAACTGATGAGCGAACGGTATCGTCGTAAATCTGGTTTCTATCCCACAGGCGTTACAAATTTGGCATATGAAAAGGCAAATATGGAGGAAGGATACATAAATCTCGACAACGACCAATATATACGAATCCCCTGTTTCTTAAATCAAGAGGAATGGCGCATTGGATTGACGCTAAAGCCTAGAAGTGAAATCGGGACTATATTATTTTTAAAGAATAAAATGAATTGGCTTCATTTATCGCTACAAAACATGCGCTTGAAATTAAAGCTAGTGTTACCGAATTTCCATTCCGAATGTATAAGTTCTTTCGAATGCTCATCCGAACAGTGGCTCGATATTGCCGTTACTAAAAAACGAGATGCAAATTCTATCGAGGCCGTTTTAAATTCTGGAGAAAGAATACACGTGACATTTCAAGATATTGAAAGTAGCTTCGTTTGTCGTGATGCAAATAATAAATGTAAGAAACCCAAGCAATCTACAGAGGGCCATCTTACGGATAAAATAAAAGTTGATTCCTTGTTAATCTCACTTTGTACCGACGAATTTTTTGTTGGAGGAGTTCCAAAAAATATCAACGTTTTGGTTTCCGAAGAATTTCCTACTTTCACTGGCATTGTAGCTTCCATCACCGTCGATAACATCTTATTAGATATACACCAGCTTAGCATTGAAAGGAACAAAAATGGAATAGTTCAAATGTCTTCAAGAACTGCGAGTGTCTCAGGGTCTTATCATGAGACATCATTGGGTAGATCGAACCGACTTAATTTGACATGTCTTCACGCGAGGAATGTTCGGAATCACAACGAAGCCGATTGGTTTCTGTTAGATACTGCGATCAAAGACGAGATGAATGGTGAAACCGTTCAATTCGTTGATGACAGTAGATTATTGAAGCTGTTTGCCTCAATGGATAGTGATTTGAGAGGATTCTACACATGCAGAGCTCGCAGCAATAAGCGTATGCAAAACATTATCACTTATGGAGTCTTGGGAAAAATCCAGTACAAGTTATCAGGACCTGATGCTACTACAGCTGTCGCTGTTATCACAACTATTGCTTTAGCGATCTTTACTTTAGGCTGGCTGTTTATGGAAGGGATACACGATCTGCGCGACGGATACGGGTTTTTTAGAGATGCGTATCTATCGCCGGAGGAAGAAGCGGACGCGGTTTGCGAATTCATAGACCAGAACAAACATTTGGTCGGAAGTGCTAGTGCTGTGAAAATTGCGAAGGCTAAAGCGAGACGGAAAGCTCGTCATTTAGCTAGTCGATTGAGTTTTGGTGCCCAAGAACCGCAAGGGTTGCTGGAGCATGAGGTCGATGAAGATAATATTCCTTCCGAACCCGAAGAATTGCCTGCACTGCCCGAAATACAGAGCAGCATCGAAGCCTCCCATAACGTGTTGAGATGTGAACCGAACTACATTAGTTCGCCAGGCCATGGTTCATTTTCATCGCCGAGAACAAAGTTCACATCAACGTCGTCTTTAGAAATGACTTCTCCGAGAGTGCTTTGTTCTCGCCTGCTCATAGCAAAGAGAATGTATTCGCCGCGTAAAACGTCAATATCGAACAGAAAGTCTATCACAGAAAATGTATCAAACCCTAGGAAGACCAGATCGAAATTGTTCACTATAAAATCTTCATCTGGACTTCAACAATCGGCGGCGCAAAAGATATTGCAAAAATTCCAAGAACTTAAAAAATATGACTCTTGA

Protein

MVMYISRLKEIVIISWIIDVSLSKKPRSKRQQEIWRVECEIGIISDPECPVDGGWSPWSSWSPCYGSCDQLGHQRRYRECNNPPPFEDGIMCSGEAEQIRSCYLTNCTVNDYKELIKGDAIRNDAFRHLETVPSLMERCLQTECPFEAIDVALNADNTWQLNAEALWNSLQCVKHNMGCPIIGEWSAWGTWSSCGARCGHGFRWRLRRCDAPPPSEALLICSGYPLQTDECVGDQCAIDIRNSNGAWGEWSPWTACSESCGIGLRRRRRSCLEMRTPISTSTWGTHCKGQHDELEMCENKKCSLNGGWSGWGPWGPCSQTCGAGRRSRSRSCTRPIPAGNGSPCMGQRTEIGSCHMLPCNAYTHVVALFNGDSSIQYNFANMHSTLFHFYIRFLPISPHGTLVRRGTLHGPYVRLSLQTWHICLDASGLAPSCSLPRICSHSVIEPAVWHSVLVTVTNEAATLRLDDSPVTLKNTFPCDPDLPNDEVEEIIVGERFHGEVQELILNFMPLQLMSERYRRKSGFYPTGVTNLAYEKANMEEGYINLDNDQYIRIPCFLNQEEWRIGLTLKPRSEIGTILFLKNKMNWLHLSLQNMRLKLKLVLPNFHSECISSFECSSEQWLDIAVTKKRDANSIEAVLNSGERIHVTFQDIESSFVCRDANNKCKKPKQSTEGHLTDKIKVDSLLISLCTDEFFVGGVPKNINVLVSEEFPTFTGIVASITVDNILLDIHQLSIERNKNGIVQMSSRTASVSGSYHETSLGRSNRLNLTCLHARNVRNHNEADWFLLDTAIKDEMNGETVQFVDDSRLLKLFASMDSDLRGFYTCRARSNKRMQNIITYGVLGKIQYKLSGPDATTAVAVITTIALAIFTLGWLFMEGIHDLRDGYGFFRDAYLSPEEEADAVCEFIDQNKHLVGSASAVKIAKAKARRKARHLASRLSFGAQEPQGLLEHEVDEDNIPSEPEELPALPEIQSSIEASHNVLRCEPNYISSPGHGSFSSPRTKFTSTSSLEMTSPRVLCSRLLIAKRMYSPRKTSISNRKSITENVSNPRKTRSKLFTIKSSSGLQQSAAQKILQKFQELKKYDS

Uniprot

H9IY03 A0A2A4JJE8 A0A0L7KZ23 A0A2H1W3W1 A0A194QVW4 A0A194QAX3 + More
A0A212F9R9 A0A2A3ET80 A0A088A0N6

Pubmed

19121390 26227816 26354079 22118469

EMBL

BABH01015922 NWSH01001185 PCG72215.1 JTDY01004298 KOB68316.1 ODYU01006139 + More
SOQ47728.1 KQ461108 KPJ09105.1 KQ459463 KPJ00571.1 AGBW02009564 OWR50486.1 KZ288191 PBC34502.1

Proteomes

UP000005204 UP000218220 UP000037510 UP000053240 UP000053268 UP000007151 + More
UP000242457 UP000005203

PRIDE

H9IY03

Pfam

PF00090   TSP_1        + More
PF02210   Laminin_G_2
PF07766   LETM1
PF00054   Laminin_G_1

Interpro

IPR000884   TSP1_rpt        + More
IPR036383   TSP1_rpt_sf
IPR001791   Laminin_G
IPR013320   ConA-like_dom_sf
IPR011685   LETM1

SUPFAM

SSF49899 SSF49899 + More
SSF82895 SSF82895

Gene 3D

2.20.100.10

ProteinModelPortal

H9IY03 A0A2A4JJE8 A0A0L7KZ23 A0A2H1W3W1 A0A194QVW4 A0A194QAX3 + More
A0A212F9R9 A0A2A3ET80 A0A088A0N6

PDB

3R6B E-value=8.39955e-16, Score=209

KEGG

101737605 no KO assigned | (RefSeq) uncharacterized LOC101737605

GO

GO:0016021

Length:

1085

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

20.11091

Exp number, first 60 AAs:

0.00618

Total prob of N-in:

0.00132

outside

1 - 853

TMhelix

854 - 876

inside

877 - 1085

Pi

14.881074

Theta

13.897976

Tajima's D

1.059451

CLR

0.230159

CSRT

0.686915654217289

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics