SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00120
Pre Gene Modal
BGIBMGA002134
Annotation
Band_7_protein_AAEL010189_[Papilio_xuthus]
Full name
Band 7 protein AAEL010189       + More
Band 7 protein AGAP004871      
Band 7 protein CG42540      
Location in the cell
PlasmaMembrane   Reliability : 1.401
 

Sequence

CDS
ATGGTGGTGACCGAAGCGACAGCGAATGAAGACGTCGACTCAGAGTCGAAGACATGTGGCAAGATCCTGGTGGTGCTATCATGGATGCTGGTGATCCTCACCATGCCGTTTTCGCTCTTCATATGCTTCAAGGTGGTGCAAGAATATGAAAGAGCTGTAATTTTTCGCTTGGGGCGTTTACTGTCTGGAGGTGCCAAAGGACCCGGAATATTCTTCATCCTGCCCTGCATTGACACGTACGCCCGAGTCGACCTACGCACACGTACCTATGATGTTCCACCACAAGAAGTGCTGACCAAAGATTCCGTAACTGTTTCCGTGGACGCCGTCGTATACTACCGCGTCCACAACGCGACTATCTCTATCGCCAACGTGGAGAACGCTCACCACTCCACCAGGCTCTTGGCTCAGACGACCTTGAGGAATACAATGGGCACTCGACCTCTGCACGAGATCTTGAGTGAGCGCGAAACGATCTCTGGCAACATGCAGCTGTCACTGGATGAGGCCACCGAGGCTTGGGGGATCAAAGTGGAGCGTGTTGAGATCAAAGACGTCCGTCTACCGGTGCAGTTGCAACGTGCCATGGCCGCCGAAGCCGAGGCTGCTCGCGAGGCTCGTGCCAAGGTCATCGCCGCCGAGGGAGAACAGAAAGCTTCTCGAGCTCTCCGTGAGGCCTCAGAAGTCATTGGTGACAGCCCTGCCGCTTTACAGCTACGATACCTACAGACCCTCAATACAATTTCGGCTGAGAAGAACTCGACCATCGTGTTTCCACTGCCAATCGACCTCCTCACCTACTTCATCAAGGCGCGAGAGGAACCCGTGTAA
Protein
MVVTEATANEDVDSESKTCGKILVVLSWMLVILTMPFSLFICFKVVQEYERAVIFRLGRLLSGGAKGPGIFFILPCIDTYARVDLRTRTYDVPPQEVLTKDSVTVSVDAVVYYRVHNATISIANVENAHHSTRLLAQTTLRNTMGTRPLHEILSERETISGNMQLSLDEATEAWGIKVERVEIKDVRLPVQLQRAMAAEAEAAREARAKVIAAEGEQKASRALREASEVIGDSPAALQLRYLQTLNTISAEKNSTIVFPLPIDLLTYFIKAREEPV

Summary

Similarity
Belongs to the band 7/mec-2 family.
Keywords
Complete proteome   Membrane   Reference proteome   Transmembrane   Transmembrane helix   Alternative splicing   RNA editing  
Feature
chain  Band 7 protein AAEL010189
splice variant  In isoform F.
EMBL
AGBW02009564    OWR50483.1    NWSH01001185    PCG72219.1    ODYU01009690    SOQ54301.1    + More
KQ461108    KPJ09101.1    KQ459463    KPJ00567.1    NNAY01000670    OXU27079.1    KQ978344    KYM94781.1    GL452320    EFN77466.1    GL437203    EFN70809.1    DS233104    EDS28121.1    GL764503    EFZ17549.1    KQ982431    KYQ56432.1    KZ288204    PBC33190.1    AXCN02001918    CH477644    EAT37869.1    KQ760382    OAD60709.1    AAAB01008905    EAA09720.4    APCN01005337    KQ435714    KOX79200.1    KQ971334    EFA01055.2    ADMH02002184    ETN57948.1    UFQT01000016    SSX17830.1    KB631855    ERL86759.1    SSX17829.1    CH940669    KRF78191.1    KRF78192.1    KQ414615    KOC68747.1    CH379070    KRT08673.1    CH902618    KPU77798.1    GBXI01013476    JAD00816.1    EDW58246.2    CH916366    EDV95603.1    CM002912    KMY97647.1    KRT08675.1    AE014296    AY060624    AY069196    BT021331    AAF47920.2    AAL28172.1    AAX33479.1    CH954178    KQS43604.1    KPU77797.1    NEVH01012091    PNF30471.1    KRT08677.1    KMY97644.1    CM000159    KRK01197.1    PNF30472.1    KPU77802.1    CM000363    EDX09241.1    CH480817    EDW50506.1    KPU77796.1    JRES01000828    KNC28005.1    KRF78193.1    GAMC01019136    GAMC01019133    JAB87422.1    KPU77801.1    KNC28001.1    KMY97639.1    PNF30475.1    KMY97642.1    AGB94114.1    AHN57961.1    KQS43599.1    EDV50948.2    KRK01193.1    EDY74047.2    KRK01194.1    APGK01057589    APGK01057590    APGK01057591    APGK01057592    APGK01057593    APGK01057594    APGK01057595    KB741280    ENN70980.1    KMY97643.1    AXCM01009917    AXCM01009918    AGB94115.1    KPU77800.1    GAKP01004588    JAC54364.1    CH963847    KRF97782.1    KRF78194.1    KQS43601.1    CH933809    EDW17555.2    KRT08676.1    EDV38989.2    KMY97641.1    BT133307    AFD10754.1    GAMC01019137    GAMC01019134    JAB87421.1    KPU77799.1    GDHF01027774    GDHF01016342    JAI24540.1    JAI35972.1    KRT08674.1    KRK01196.1    KNC28004.1   
Pfam
PF01145   Band_7
Interpro
IPR018080   Band_7/stomatin-like_CS        + More
IPR036013   Band_7/SPFH_dom_sf       
IPR001107   Band_7       
IPR001972   Stomatin_fam       
IPR000859   CUB_dom       
IPR035914   Sperma_CUB_dom_sf       
SUPFAM
SSF117892   SSF117892        + More
SSF49854   SSF49854       
Gene 3D
PDB
4FVF     E-value=3.40018e-41,     Score=421

Ontologies

Topology

Subcellular location
Membrane  
Length:
276
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
29.3671
Exp number, first 60 AAs:
23.59099
Total prob of N-in:
0.43729
POSSIBLE N-term signal
sequence
outside
1  -  23
TMhelix
24  -  46
inside
47  -  276
 
 

Population Genetic Test Statistics

Pi
18.614041
Theta
19.975758
Tajima's D
-1.106489
CLR
0.085998
CSRT
0.117994100294985
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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