Gene

KWMTBOMO00112

Pre Gene Modal

BGIBMGA002127

Annotation

apterous_[Bombyx_mori]

Location

Bomo_Chr1(+):3557391-3583260      View in EpiBrowser

Transcription factor

Homeobox

Location in the cell

Nuclear   Reliability : 3.442

CDS

ATGCTGAAGGAACGCGAGAGCTCAGAAGGATCCCCCGGGGCACCAGACGAGTGCGCAGGCTGCGGAGGCAAAATACAAGATCGATATTACCTCCTAGCTGTGGATCGTCAGTGGCACGGATCCTGCCTGCGCTGCTGCGAATGTCGTCTGCCTTTAGACACCGAACTGACTTGCTTCTCACGGGATGGAAACATATATTGCAAAGAGGATTATTACAGGTTGTTTTGCGTGAAGCGTTGCGGCAGATGCTGTAATGGTATCACTGCCAATGAGCTCGTGATGCGAGCCAGAGACCTGGTCTACCACCTCAACTGCTTCACTTGTGTCGCTTGCGGGACTCAGCTTTCTAAGGGGGATGTGTTCGGAATGAAAGGTGGTCTGGTATACTGTCGTCCTCATTACGACACCGCTTGCTTGGATGACTACTGCGATGAAGAAATGACTAACGGTTATAGGTGTCAAGATATGCACAATGGCGGAAACTCACCCCAGTACTATAGTGGAGGTTCAACTCCAAAAGGTCGGCCGAGGAAGAGAAAGATACCCCACGGCTCTCCGGACGAGCTACAAGCACAAACCATACGGATGGCCAGCTCCGCTCTAGAAATCCTGCATCGTGGCGATCTGTCTTCATCCATGGAGTCTCTGGCTTATGACTCTTCAGTGGCCTCTCCAGGCAGCGTTTCTAGCCACACGCAAAGGACCAAGCGAATGCGAACCAGCTTCAAGCATCACCAGCTACGGACCATGAAATCTTACTTCGCAATCAACCAGAACCCTGATGCGAAAGACTTAAAGCAATTGGCCCAGAAGACTGGACTCTCGAAAAGGGTCTTACAGGTCTGGTTCCAAAATGCGCGCGCAAAATGGCGACGTAACATGATGAGGCAAGAAACGAACGGGGTTAATGGTCATACTTCGATTGTCCCTGGTAACGGTGGAACACCAAGTATAGTTCCCACCGCGCTGATCCTCTCGGAGCCTCTCCAGCCCCTTGAAGATTTGAGGGTACATACTCCCCATCCGATGGCGTTCAATGAACTTTACTGA

Protein

MLKERESSEGSPGAPDECAGCGGKIQDRYYLLAVDRQWHGSCLRCCECRLPLDTELTCFSRDGNIYCKEDYYRLFCVKRCGRCCNGITANELVMRARDLVYHLNCFTCVACGTQLSKGDVFGMKGGLVYCRPHYDTACLDDYCDEEMTNGYRCQDMHNGGNSPQYYSGGSTPKGRPRKRKIPHGSPDELQAQTIRMASSALEILHRGDLSSSMESLAYDSSVASPGSVSSHTQRTKRMRTSFKHHQLRTMKSYFAINQNPDAKDLKQLAQKTGLSKRVLQVWFQNARAKWRRNMMRQETNGVNGHTSIVPGNGGTPSIVPTALILSEPLQPLEDLRVHTPHPMAFNELY

Uniprot

F2Z7K7   A0A2A4JV72   A0A194QZS9   A0A194Q4V1   A0A212F9S0   A0A139WK10   + More
C0KZ22   A0A1W4WTN2   A0A154PMF9   E0W1S9   A0A158NLR3   A0A1B6JDG9   A0A088A1G4   A0A0C9RLT4   A0A195FUU8   A0A195CE01   A0A232F860   E2B1F1   K7JAB2   E2C2P6   A0A067R7N9   A0A3L8DK78   A0A026WFM6   A0A3B3D3H9   H2MPF5   A0A3P9LAV2   A0A146RAR2   T1J7L2   A0A2J7QK93   Q4SDH5   Q6JTI8   A0A1S3PI95   A0A060XPK2   A0A1S3NKM7   A0A1L8F6B6   A0A060Y6D2   H2RSS0   A0A1S3PHL4   A0A3B5LKH7   A0A3B5PTQ3   A0A3P9PDA7   A0A3B3QTD5   A0A2I4CRQ8   W5MD70   I3KWI0   A0A147B487   A0A3B4X0S5   A0A3B4U7P8   M3ZNX6   A0A3B4ZKG2   A0A3P8X7Y0   A0A3P8T8B1   A0A1A7XEH9   Q6K1E8   A0A1B8YA12   A0A087XK53   A0A3B4FDN4   A0A3B3XUI4   A0A3B3VIC5   F7E6R5   A0A3P8XBL8   A0A3P8QFZ7   A0A1S3PHH0   A0A3P9CMT3   A0A3B3Z744   B3DGW8   A0A1A8IX63   A0A1A8JUU4   A0A1A8PZ23   A0A1S3AS91   A0A1S3NKL5   A0A151ITR8   A0A3B3TFI4   A0A1A8F3X1   A0A2Y9DJJ7   A0A2U9BR19   O42108   A0A1S3NKM9   G3NH18   H3BHP7   G7NFT9   A0A151MG25   A0A2I0M3N4   A0A1V4J5U9   A0A2I0M3P4   A0A3M0IVB6   A0A2I0U4W5   A0A151MG51   F1M7M2   A0A1A8P2Z1   A0A1A8M022   A0A1A7ZM21   A0A1A8PSG1   A0A1A8BI41   A0A1A8EDL6   A0A1A8V7A0   F6Z9H5   Q543C6  

Pubmed

21296154    26354079    22118469    18362917    19820115    20566863    + More
21347285    28648823    20798317    20075255    24845553    30249741    24508170    29451363    17554307    15496914    24755649    27762356    21551351    23542700    29240929    25186727    25069045    16470628    20431018    25463417    9299541    15592404    9215903    22002653    22293439    23371554    15057822    19468303    10349636    11042159    11076861    11217851    12466851    16141073   

EMBL

AB543073    BAK19077.1    NWSH01000582    PCG75514.1    KQ461108    KPJ09096.1    + More
KQ459463    KPJ00563.1    AGBW02009564    OWR50480.1    KQ971334    KYB28253.1    FJ647812    ACN43342.1    KQ434978    KZC13049.1    DS235873    EEB19661.1    ADTU01019691    ADTU01019692    GECU01010365    JAS97341.1    GBYB01014307    JAG84074.1    KQ981219    KYN44425.1    KQ977957    KYM98461.1    NNAY01000712    OXU26845.1    GL444886    EFN60494.1    AAZX01003022    AAZX01003025    AAZX01004767    AAZX01015261    GL452203    EFN77731.1    KK852645    KDR19539.1    QOIP01000007    RLU20746.1    KK107238    EZA54733.1    GCES01120777    JAQ65545.1    JH431936    NEVH01013275    PNF29010.1    CAAE01014638    CAG01307.1    AY307983    AAQ81868.1    FR905368    CDQ78760.1    CM004480    OCT67141.1    FR907771    CDQ87266.1    AHAT01024932    AERX01036361    AERX01036362    AERX01036363    GCES01001151    JAR85172.1    HADW01015101    HADX01006593    SBP16501.1    AY141037    CM004481    AAN41461.1    OCT65600.1    KV460364    OCA19844.1    AYCK01007078    AYCK01007079    AYCK01007080    AAMC01084535    AAMC01084536    AAMC01084537    BC162549    AAI62549.1    HAED01015471    SBR01916.1    HAEE01003652    SBR23672.1    HAEI01003905    SBR86481.1    KQ980982    KYN10789.1    HAEB01006272    HAEC01014675    SBQ52799.1    CP026251    AWP06635.1    AADN05000150    AB005882    BAA21846.1    AFYH01007685    CM001267    EHH23788.1    AKHW03006215    KYO23482.1    AKCR02000043    PKK24291.1    LSYS01008925    OPJ67608.1    PKK24292.1    QRBI01000209    RMB93301.1    KZ506170    PKU41051.1    KYO23483.1    AABR07051808    HAEG01005923    SBR75387.1    HAEF01010445    SBR50395.1    HADY01004876    SBP43361.1    HAEH01008342    SBR84206.1    HADZ01002617    SBP66558.1    HAEA01015533    SBQ44013.1    HAEJ01014990    SBS55447.1    AL929186    BX813320    AK053572    BAC35432.1   

Proteomes

UP000218220    UP000053240    UP000053268    UP000007151    UP000007266    UP000192223    + More
UP000076502    UP000009046    UP000005205    UP000005203    UP000078541    UP000078542    UP000215335    UP000000311    UP000002358    UP000008237    UP000027135    UP000279307    UP000053097    UP000261560    UP000001038    UP000265180    UP000265200    UP000235965    UP000007303    UP000087266    UP000193380    UP000186698    UP000005226    UP000261380    UP000002852    UP000242638    UP000261540    UP000192220    UP000018468    UP000005207    UP000261360    UP000261420    UP000261400    UP000265140    UP000265080    UP000008143    UP000028760    UP000261460    UP000261480    UP000261500    UP000265100    UP000265160    UP000261520    UP000079721    UP000078492    UP000248480    UP000246464    UP000000539    UP000007635    UP000008672    UP000050525    UP000053872    UP000190648    UP000269221    UP000002494    UP000000589   

PRIDE

F2Z7K7    F1M7M2    F6Z9H5   

Pfam

PF00046   Homeodomain        + More
PF00412   LIM

Interpro

IPR017970   Homeobox_CS        + More
IPR001356   Homeobox_dom       
IPR001781   Znf_LIM       
IPR009057   Homeobox-like_sf       

SUPFAM

SSF46689   SSF46689       

CDD

cd00086  homeodomain

ProteinModelPortal

F2Z7K7   A0A2A4JV72   A0A194QZS9   A0A194Q4V1   A0A212F9S0   A0A139WK10   + More
C0KZ22   A0A1W4WTN2   A0A154PMF9   E0W1S9   A0A158NLR3   A0A1B6JDG9   A0A088A1G4   A0A0C9RLT4   A0A195FUU8   A0A195CE01   A0A232F860   E2B1F1   K7JAB2   E2C2P6   A0A067R7N9   A0A3L8DK78   A0A026WFM6   A0A3B3D3H9   H2MPF5   A0A3P9LAV2   A0A146RAR2   T1J7L2   A0A2J7QK93   Q4SDH5   Q6JTI8   A0A1S3PI95   A0A060XPK2   A0A1S3NKM7   A0A1L8F6B6   A0A060Y6D2   H2RSS0   A0A1S3PHL4   A0A3B5LKH7   A0A3B5PTQ3   A0A3P9PDA7   A0A3B3QTD5   A0A2I4CRQ8   W5MD70   I3KWI0   A0A147B487   A0A3B4X0S5   A0A3B4U7P8   M3ZNX6   A0A3B4ZKG2   A0A3P8X7Y0   A0A3P8T8B1   A0A1A7XEH9   Q6K1E8   A0A1B8YA12   A0A087XK53   A0A3B4FDN4   A0A3B3XUI4   A0A3B3VIC5   F7E6R5   A0A3P8XBL8   A0A3P8QFZ7   A0A1S3PHH0   A0A3P9CMT3   A0A3B3Z744   B3DGW8   A0A1A8IX63   A0A1A8JUU4   A0A1A8PZ23   A0A1S3AS91   A0A1S3NKL5   A0A151ITR8   A0A3B3TFI4   A0A1A8F3X1   A0A2Y9DJJ7   A0A2U9BR19   O42108   A0A1S3NKM9   G3NH18   H3BHP7   G7NFT9   A0A151MG25   A0A2I0M3N4   A0A1V4J5U9   A0A2I0M3P4   A0A3M0IVB6   A0A2I0U4W5   A0A151MG51   F1M7M2   A0A1A8P2Z1   A0A1A8M022   A0A1A7ZM21   A0A1A8PSG1   A0A1A8BI41   A0A1A8EDL6   A0A1A8V7A0   F6Z9H5   Q543C6  

PDB

2DMQ     E-value=7.87841e-31,     Score=333

KEGG

692399    K09373 LIM homeobox protein 2/9 | (RefSeq) ap, Bmap-B; apterous

GO

GO:0006355   GO:0043565   GO:0046872   GO:0005634   GO:0000981   GO:0007409   GO:0048665   GO:0016740   GO:0003677   GO:0021794   GO:0021554   GO:0021537   GO:0031290   GO:0071632   GO:0043010   GO:0030182   GO:0000977   GO:0045944   GO:0007411   GO:0007634   GO:0010468   GO:0009416   GO:0030900   GO:0007420   GO:0008045   GO:0001228   GO:0000978   GO:0021978   GO:0021987   GO:2000678   GO:0048675   GO:0001843   GO:0009953   GO:0021522   GO:0060041   GO:0021772   GO:0003682   GO:0045199   GO:0045814   GO:0007498   GO:0050768   GO:0008134   GO:2000179   GO:0001942   GO:0008270   GO:0015074   GO:0048013   GO:0005003   GO:0005887   GO:0007169   GO:0016021  

Subcellular location

Nucleus  

Length:

349

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.06563

Exp number, first 60 AAs:

0

Total prob of N-in:

0.01401

outside

1  -  349

 

 

Pi

18.056493

Theta

21.72665

Tajima's D

-1.316005

CLR

0.008407

CSRT

0.0853957302134893

Interpretation

Uncertain