SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00109
Pre Gene Modal
BGIBMGA002123
Annotation
PREDICTED:_type_I_inositol_3?4-bisphosphate_4-phosphatase-like_[Bombyx_mori]
Location
Bomo_Chr1(+):3235536-3276378      View in EpiBrowser
Location in the cell
Nuclear   Reliability : 3.311
 

Sequence

CDS
ATGAGGTATAACAAGCAGGAGCTGGTGGCCCTGGCCTCGCAGACGTCGCAGAACTTCGACCGCGAGGGTGTGCTAGTCATGAGGGAGAGACAGGACGGATTCTTCCGTAGATCTGAAGGGTCAACAGTTCGGTGGTTTCGTCTTAGAGGCAATCTACTCTTCTACTTAAAAGGCCCGGAACCCTGGTATGAACCAATGGGCGTGATAATTTTGGGCAATCATCAAGTAAAACTACAATCGCAAGACGAAAACGGACATTGGCCTTTTCAAATCGTGTGGGACAGCGGAGTCAGTTACAGAATGGCGACATTTCTTGAGACCGAGCGCACTCTTTGGCTGAAAGCGATACAGTTAGCTTCCTACGACAACATGCACTCCAGAGTTCAAGATTTGAAGGACCGACTCAACGCCATTCGGCCAGTCATCGACATCACCAACTACAGGCTGCAGAAGGGGATCTTTGTCGACATGAACGAGGTACCGATCTGTGAGTTGGCGCTGTCTTGCGACAACTTGCTCTGCGACGCTCACGGCAAGCCTCCCTCGCCCATGGTAGTCATCTATGCGAAGAATCCGAAGGGACCCTGCATTGAATACGGTTCTACTGAGGTGGTAGAGATGTGTAGTAACCCGAGTTTTTCGAAAACTATTCTGTTCCGGGCCAGCGACGGTCTGAACGGCGACACCATGATTCGGCTCGTGGTTTACGATGTCAAGGAACCGGTATCGGACACCACCGTGCCAATGGGCTTCACCAGTATGAAGCTGAGCATGATACAGGAAGCCCAGAGGCTGCGCGTGTCCCTTTGCACCAAAGAGGAGAAGACGATCGGTTTCGTCACCTTGAACGGCTGGAGTCTGGAGCCGTCTTACACAGGCACCAGTCCAGTCCACAGCAACGACAGGAGCATCGAGATACCGCAAAAGGTACTCTGCCACCGCAGGTCTCAATCCCTGCCGCCACGTCTCGGCTTGAAACTCAAGTTTCCCTCGTATGGATCGTTGATCAAGCAGAATTTCCTGAACAGCCACCAAGTGACGTACAGGTTCCAATCGGGCCTCGGTGGCGACATAACTGTCCACGAAATCATGACGGAACCGAAGATTTGCTTCTCGATGCCGGTCCAACTGTTGAACATTTATATTGAACGCGAACGAGAGCTGCTAGAGGAATTGCTCTCGGTCGGTGAGATCTGTAGCCAGTGGCAGAACCGGCAGCTGGAGTTAGTCAGCAACCACGTCGGTCTGCTGAAGCACTACGGACACGCCAAGAAGTGTATGGAGAGCATTGACGACGTTTATTTCAAGGCTAGCTGTCGCAAGGATGACGCTAGTTTAGAGTTCGCGCCGGTTAACTTGCACTTGCAACGTATGTGGGTGCACAATGACACGTTGAACAAAACCGGCTTCCATGACATTGTAACTGCCGGAGCTTTTGCCGCTCACACTCATAAGACAGAGCGATCTGGAGGATTGATCAGGCTGGTCCAACACGTCAAAGACATTAATAGCAGCAAAGCCGAGCTGCAATCTATTACCAATAAGATACAAGTCGAATATGACAACGTGGTGGCTCTGCGGCGTCTGAGAGACGAACTGTCCGGCGACATGGACAGGATCATTATGCTGCTTCAGGCAAAGCAGATCGAAGAAGTTCAAGCCATATTGGACGGCATTAAGAACAAGGCGAAGAGCATTCTCGCATTGTGGGACCCGACAGCCGTGGAGGAGACGCTGTCTTACATCGGGTGGCCGAAAGATTATGGTTACGACGAGTCCGATGGGCAGACAATGTCCACGATCCTACGTCTGACGGAACAGATGAACCTGTTCGAAGCCGTCAATTCGGACTGCGAAACCCTGGACGTTTCGTCTAGCTCCAGCTCGAAGGAGGCCTCGCCCACTGAAGACGACCCGTCGACATGTACCAGCGAACCGAGCATGAGTTGCGACAAAAAGAATCCAATATCCGAAGAAATCGAAGAAGAACTGCAGTTCCACAACGATTACTTCAAGACCGAGAGAGAAGAACGGATCAGTCTAAATAATTCGTTCCGTTCAGTTCGTTCAGCGAAAACGACCGAACCGAGTCATTCGCTCGATTCGACTAAGACGAGGCACGGTAGCCTCAGATATGACTTTAAGAGTTCCGCCTCGCTGGAGCAGGTCTCTTATCGATGCCTCGTTAATAACAACAAAGTCGATAAGAGGAAGACGCCTCAAGGTATATCGGACGCACTGGACGACGTCAGTCCTCTGGATCAGACGACCAGAGACAACAACTTTGCGTACTTGAAGGCCGTCGGAACAGCAATCGAGGAAGCGTTGGCTTCGCTGATTCGGTTCGTTGTCGAAATAATCCGAACTGAGAATGGAGACCACACCGAAGAGCAGATGGATGTTATCAGAGCTCAGGCTGAATTGCTGAAGAAGAACGTGGACGGCGCTGCGCGTTGGCTGCGCGTGTCTCACGCCGCCCTGCGTCTCCGCTGCGAAGCTCCGCTGTGGGCGCGCGAGAATGCCGTCCTCCAAACCAGGAGGGACACTTGTTTCTCTCAAGCCTTGACGACTGTCACGTCAGGGTTGCTCTGCTGGTTATGCTCTGTACCCAGCGATGTGGTAGTCAAGCTGTTGTCTTCCGGGCTGGGCCCCCTCTGTGGATTCGAAGGTCTCCTCAGTTTGTATTCGAATGAGAAGGCAATGTGGGGCGACATGGTCGTGGCCGTTGAAGATCTTCAGACGGTCGTCTTTCAACTGTGTAAAGTCGGGCACGGTAATCCATCGGTACCTCAAGTGACTGGCGCCAGAGGTGCATTGGTGGTTAAATTACCAGTGTCGGAATCATTGTACTCGAAGTTTGACGTGAAGGAGCATCTTTCGTTCACAATAACGGCGGTGTTCTTCAACATCGGCATTAACGAGAAGGCGTCGCTGGCCGAAGCCCTCGGCGAAACGATTCCGCAGTACCACTCGAACAGCGATAACTTGGACCGCCTCAACAAGTACTACCACAAGTTCTGCAAGGTCTTCCCGCAGGATCTGGTCGCCATCACCAGAGGAGTGATGACATTCAGGAAACCGTCTTCAAGGTCGAAGCCGTTGGAGGAGGTAATGGAGAACCTTAGGATCTCGGTGCACAAAAAAGTGCCAAGGAACTACGAGGTGATACAGCTGGCTTCGATGGCCGTAAGGCAGATGAACGGCGTAAGGTTCACGTCCTGTAAAAGCGCCAAGGATAGGACCGGAATGTCTGTGACCCTAGAACAGTGTTCGATATTGGCCTCGGAGTATCATCTCGCCGAGAACGAAGTGAAGAAGGCCCTTGATATTATGAGAAGCGAGGGCTGTCGCCGTGCTAACACCCAAAAGAACATCGGTGTTAGAAAATACGCCTTCACTAAGAAGCAAGTGATGACCCTGCCGGGCGATTACCGTCCGCCCGCCGGAACATATGGCATCACCCAAACATAA
Protein
MRYNKQELVALASQTSQNFDREGVLVMRERQDGFFRRSEGSTVRWFRLRGNLLFYLKGPEPWYEPMGVIILGNHQVKLQSQDENGHWPFQIVWDSGVSYRMATFLETERTLWLKAIQLASYDNMHSRVQDLKDRLNAIRPVIDITNYRLQKGIFVDMNEVPICELALSCDNLLCDAHGKPPSPMVVIYAKNPKGPCIEYGSTEVVEMCSNPSFSKTILFRASDGLNGDTMIRLVVYDVKEPVSDTTVPMGFTSMKLSMIQEAQRLRVSLCTKEEKTIGFVTLNGWSLEPSYTGTSPVHSNDRSIEIPQKVLCHRRSQSLPPRLGLKLKFPSYGSLIKQNFLNSHQVTYRFQSGLGGDITVHEIMTEPKICFSMPVQLLNIYIERERELLEELLSVGEICSQWQNRQLELVSNHVGLLKHYGHAKKCMESIDDVYFKASCRKDDASLEFAPVNLHLQRMWVHNDTLNKTGFHDIVTAGAFAAHTHKTERSGGLIRLVQHVKDINSSKAELQSITNKIQVEYDNVVALRRLRDELSGDMDRIIMLLQAKQIEEVQAILDGIKNKAKSILALWDPTAVEETLSYIGWPKDYGYDESDGQTMSTILRLTEQMNLFEAVNSDCETLDVSSSSSSKEASPTEDDPSTCTSEPSMSCDKKNPISEEIEEELQFHNDYFKTEREERISLNNSFRSVRSAKTTEPSHSLDSTKTRHGSLRYDFKSSASLEQVSYRCLVNNNKVDKRKTPQGISDALDDVSPLDQTTRDNNFAYLKAVGTAIEEALASLIRFVVEIIRTENGDHTEEQMDVIRAQAELLKKNVDGAARWLRVSHAALRLRCEAPLWARENAVLQTRRDTCFSQALTTVTSGLLCWLCSVPSDVVVKLLSSGLGPLCGFEGLLSLYSNEKAMWGDMVVAVEDLQTVVFQLCKVGHGNPSVPQVTGARGALVVKLPVSESLYSKFDVKEHLSFTITAVFFNIGINEKASLAEALGETIPQYHSNSDNLDRLNKYYHKFCKVFPQDLVAITRGVMTFRKPSSRSKPLEEVMENLRISVHKKVPRNYEVIQLASMAVRQMNGVRFTSCKSAKDRTGMSVTLEQCSILASEYHLAENEVKKALDIMRSEGCRRANTQKNIGVRKYAFTKKQVMTLPGDYRPPAGTYGITQT

Summary

Uniprot
H9IXZ0   A0A2A4JSI1   A0A194QUE9   A0A194Q5C5   A0A212F9R3   A0A1Y1MYC8   + More
A0A1Y1MYC2   A0A087URJ6  
Pubmed
19121390    26354079    22118469    28004739   
EMBL
BABH01015874    BABH01015875    NWSH01000713    PCG74648.1    KQ461108    KPJ09092.1    + More
KQ459463    KPJ00559.1    AGBW02009564    OWR50477.1    GEZM01017434    JAV90682.1    GEZM01017435    JAV90681.1    KK121214    KFM79985.1   
Proteomes
UP000005204    UP000218220    UP000053240    UP000053268    UP000007151    UP000054359    + More
PRIDE
H9IXZ0   
Pfam
PF00169   PH        + More
PF00168   C2
Interpro
IPR039034   INPP4        + More
IPR035892   C2_domain_sf       
IPR011993   PH-like_dom_sf       
IPR001849   PH_domain       
IPR000008   C2_dom       
Gene 3D
2.60.40.150     2.30.29.30    
ProteinModelPortal
H9IXZ0   A0A2A4JSI1   A0A194QUE9   A0A194Q5C5   A0A212F9R3   A0A1Y1MYC8   + More
A0A1Y1MYC2   A0A087URJ6  

Ontologies

KEGG
101743706    K01109 inositol polyphosphate-4-phosphatase [EC:3.1.3.66] | (RefSeq) type I inositol 3,4-bisphosphat
PATHWAY
00562    Inositol phosphate metabolism - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)
04070    Phosphatidylinositol signaling system - Bombyx mori (domestic silkworm)
GO
GO:0016316   GO:0005515   GO:0008536   GO:0005488   GO:0006508   GO:0015074   GO:0048013   GO:0005003   GO:0005887   GO:0007169   GO:0016021  
PANTHER
PTHR12187  

Topology

Length:
1156
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01208
Exp number, first 60 AAs:
0.00411
Total prob of N-in:
0.00039
outside
1  -  1156
 
 

Population Genetic Test Statistics

Pi
20.608787
Theta
18.079716
Tajima's D
-1.228324
CLR
0.024345
CSRT
0.0988450577471126
Interpretation
Uncertain
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