SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00106  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA002013
Annotation
PREDICTED:_importin-7_isoform_X1_[Bombyx_mori]
Location in the cell
Golgi   Reliability : 1.311 Nuclear   Reliability : 1.668
 

Sequence

CDS
ATGTACAGAGTTAGGAGGTATGGCAGCCCGGTGAACGCGCGTGAGGAGTACGTCCAGTTCGCGGAGTGGTACCTCACCACCTTCACCGGTGGTATCTTGGACGTGCTCCTTCGGATCCTGGATCAGTACAGGAACAAAATATACATATCGCCCCGTGTACTCCAGCAGACGCTCAGCTACATCGATCACTGCGTAGTCCACTCGCACTCTTGGAAGTTACTGAAGCCGCACATGTTCGCCATCATACAAGATGTTCTGTTCCCCCTGATGTCTTATTCTGAAAATGACGAAGACCTCTGGGAAAATGATCCTCATGAATATATACGCATCAAATTCGATATTTTCGAGGACTATGTTTCTCCTGTAACAGCAGCACAGTCTTTGCTCATTTCCTCTTGCAAGAAGCGAAAGGGAATGCTCGAACGGACTATGCAACTTTGTATGCAGATACTAACCTGCCAGAATGGAGAGTATGGTCCGAGGCAGCGTGATGGTGCGCTTCACATGGTCGGCACTCTGAATGAAATCCTTGTCAAAAAGAAGTTTTACAAGGACGAGATTGATTCCCTCCTTAGCATGTATGTCTTCCCTGAGTTCCATAGCCCACTGGGTTATATGCGAGCCAGAGGTTGCTGGGTATTACATTGCTTTGCGAGCATTCGCTTCAAGAGCGAGCAGCTTTTGTTTGAGGCTGTTCGCCTTACAGTCGATTCTTTGTTGAACGATACTGATTTACCTGTCAAAGTAGAAGCGGCTATAGCAGTACAGATGCTATTAACATCACAGGAAAAGGTCCATAAGATCCTCGAACCTCAAGTTAAGGAAGTAACATCAGAACTACTGAAGGTTATCCGTGAGACTGAGAACGACCATATTGCTAATGTGTTGCAAAAGATTGTGCCAATGTATACTGAGCAGCTAATGCCAATGGCTTTTGAGATAACAGACCACCTTGCTACCACATTCAGTAAGGTAATTGAGACCGATGCAGGCACCGATGAAAAGGCCATCACAGCAATGGGCCTCCTTACAACTATGGAGACTGTACTAAACGTAATGGAAGATAACCCGGAGATCATGGCACAACTCGAAAAAACTGTCCTACGTGTAGTTGGACACATCCTTCATCACAACATTATTGAATATTATGAAGAAGCCATGACTTTACTATGCAATCTAACAGCTAAAAGCATATCTGAAGACATGTGGAAGGTTTTAGAATTGTTGTACCAAGTCTTTGAGAAGGAAGGGTTTGACTACTTTACAGACATGATGCCCGTATTGCACAACTATGTAACAGTTGATACCAATGCCTTCCTGTCCAACGAAAATCACATACTAGCCATGTTTAACATGGTCAAAGCGGTGCTGAACTCCGATGCCGAAGACGAATCGGAGATATATGCAGCGAAATTACTGGAAGTCATGGTGCTTCAGTGCGCTGGGAAGATAGATAATTGTCTACCATCATTTGTGGAGCTTGTACTCAATAGGTTGACCAGAAAAGTAAAGACCTCTGAACTCAGGACCATGCTGCTTCAGGTCCTCATAGCTATCCTGTACAGCAATCCTCAATTGCTGTTTTCTATCCTGGACAAGCTTCAGGAGGCGGTGCCTAATGCGTCCATTACCCAGCATTTCATAAAACAATGGATCCACGATACTGACTGTTTCATGGGGCTTCATGACAGAAAACTTTGCGTGCTCGGCATTTGCACACTACTGGACATGGGCCCTCAGCGACCCAACCTAGATGAGTTCATTCCTAAGCTGCTGCCGTCCTGTTTGGTGCTGTTTGATGGTTTGAAACGAGCTTACGAAAGCCGAGCCGAGGCTGATGATGATTCATCTTCAGAGGAAGATGACCAGGATCTTGATGAAGAGACCTTGTCGAGTGACGAAGACGACATCCAGGAAATGAGCCACGAGTACCTGGAAACGCTCGCCCGCATGGCAGTAAAAACTAGCAATCAGCAGGGTGTCGAGATGACTGCCAAAATTGAAGATTACTATGACAGCGATGACGACGATGACGACTACGAACCGGAGGATGCTGCCATTGAATGCTACACAACACCCCTCGACGACAGGGACTGTCCTGTCGATGAGTACGTTAAATTCAAGACCACGCTCTCCGCTTTATCGAGCACCGAGCCTGCTTTGTATCACGCATTAACTAGTGTGCTCAGTGAAGACCAAAAGAAGCAACTGAGTGCTGTGTTTGTGCTCGCTGACCAGCGTAAGGCCCAGATGGACAGCAGACGCATTGAACAGAGTGGAGGTTACTCGTTCACGGTGCCAGCTCAGGTGCCAACGACATTCAAGTTCGGATCTTAA
Protein
MYRVRRYGSPVNAREEYVQFAEWYLTTFTGGILDVLLRILDQYRNKIYISPRVLQQTLSYIDHCVVHSHSWKLLKPHMFAIIQDVLFPLMSYSENDEDLWENDPHEYIRIKFDIFEDYVSPVTAAQSLLISSCKKRKGMLERTMQLCMQILTCQNGEYGPRQRDGALHMVGTLNEILVKKKFYKDEIDSLLSMYVFPEFHSPLGYMRARGCWVLHCFASIRFKSEQLLFEAVRLTVDSLLNDTDLPVKVEAAIAVQMLLTSQEKVHKILEPQVKEVTSELLKVIRETENDHIANVLQKIVPMYTEQLMPMAFEITDHLATTFSKVIETDAGTDEKAITAMGLLTTMETVLNVMEDNPEIMAQLEKTVLRVVGHILHHNIIEYYEEAMTLLCNLTAKSISEDMWKVLELLYQVFEKEGFDYFTDMMPVLHNYVTVDTNAFLSNENHILAMFNMVKAVLNSDAEDESEIYAAKLLEVMVLQCAGKIDNCLPSFVELVLNRLTRKVKTSELRTMLLQVLIAILYSNPQLLFSILDKLQEAVPNASITQHFIKQWIHDTDCFMGLHDRKLCVLGICTLLDMGPQRPNLDEFIPKLLPSCLVLFDGLKRAYESRAEADDDSSSEEDDQDLDEETLSSDEDDIQEMSHEYLETLARMAVKTSNQQGVEMTAKIEDYYDSDDDDDDYEPEDAAIECYTTPLDDRDCPVDEYVKFKTTLSALSSTEPALYHALTSVLSEDQKKQLSAVFVLADQRKAQMDSRRIEQSGGYSFTVPAQVPTTFKFGS

Summary

EMBL
NWSH01000713    PCG74649.1    GDQN01008068    JAT82986.1    AGBW02009564    OWR50476.1    + More
ODYU01009088    SOQ53255.1    GAIX01004691    JAA87869.1    KQ461108    KPJ09091.1    KQ459463    KPJ00558.1    JTDY01001556    KOB73543.1    KK852542    KDR21733.1    GEBQ01005732    JAT34245.1    GEBQ01028963    JAT11014.1    NEVH01015312    PNF26979.1    KZ288338    PBC27824.1    GEDC01005535    JAS31763.1    GL436428    EFN72038.1    GL445642    EFN89289.1    KQ976417    KYM89861.1    GL888384    EGI61947.1    KQ980530    KYN15632.1    KQ982745    KYQ51368.1    GBYB01014599    JAG84366.1    KQ978164    KYM96645.1    KQ435851    KOX70779.1    KQ434899    KZC10919.1    KK107485    EZA50126.1    KQ981953    KYN32528.1    QOIP01000006    RLU21471.1    GDUN01000638    JAN95281.1    GBBI01000258    JAC18454.1    GFDL01015245    JAV19800.1    GFTR01008506    JAW07920.1    JXUM01114837    JXUM01114838    JXUM01114839    JXUM01114840    GAPW01000085    KQ565822    JAC13513.1    KXJ70625.1    LBMM01000867    KMQ97332.1    GBGD01000256    JAC88633.1    GEZM01087529    JAV58644.1    AK417723    BAN20938.1    GFAH01000301    JAV48088.1    GDAI01000265    JAI17338.1    DS231833    EDS32227.1    GDIP01082936    JAM20779.1    GAKP01009000    JAC49952.1    GDIP01209764    JAJ13638.1    GDIQ01060591    JAN34146.1    GDIP01183067    JAJ40335.1    GDIP01180867    JAJ42535.1    GDIP01082935    JAM20780.1    GDIP01132672    JAL71042.1    LJIG01022529    KRT80096.1    KA646171    AFP60800.1    JXJN01001782    GBXI01008508    JAD05784.1    GAMC01014180    JAB92375.1    GANO01000576    JAB59295.1    KQ971318    EFA00370.1    JRES01000997    KNC26288.1    CM000159    EDW93831.1    CH480815    EDW40647.1    CM002912    KMY98280.1    CH954178    EDV50398.1    AE014296    AF132299    BT053682    AAF50487.1    AAF63407.1    ACK77597.1    BT004887    AAO45243.1    CH902618    EDV40386.1    CH933809    EDW18596.1    GAMD01000599    JAB00992.1    AF251145    AAF68970.1    KK119611    KFM76182.1    CH963876    EDW76707.1    CP012525    ALC43375.1    GGFM01001255    MBW22006.1    GGFM01001263    MBW22014.1    KQ414617    KOC68316.1    GDIP01031840    JAM71875.1    GDIP01048291    JAM55424.1    CH916366    EDV96288.1    CH940647    EDW69487.1    CH379067    EAL31313.1    NNAY01003086    OXU20007.1    APCN01000188    UFQS01000264    UFQT01000264    SSX02191.1    SSX22568.1    GGFK01001570    MBW34891.1    GGFK01001254    MBW34575.1    OUUW01000012    SPP87185.1    SPP87186.1    GGFJ01001299    MBW50440.1    SSX02190.1    SSX22567.1    GGFJ01002148    MBW51289.1    GGFJ01001626    MBW50767.1    IAAA01008667    IAAA01008668    IAAA01008669    LAA00551.1    GGFL01004602    MBW68780.1   
Pfam
PF03810   IBN_N        + More
PF08506   Cse1
PF03378   CAS_CSE1
PF08389   Xpo1
Interpro
IPR011989   ARM-like        + More
IPR013713   XPO2_central       
IPR001494   Importin-beta_N       
IPR016024   ARM-type_fold       
IPR005043   XPO2_C       
IPR013598   Exportin-1/Importin-b-like       
IPR000225   Armadillo       
SUPFAM
SSF48371   SSF48371       
Gene 3D
PDB
6N88     E-value=0,     Score=1901

Ontologies

Topology

Subcellular location
Nucleus  
Length:
778
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
7.00581999999997
Exp number, first 60 AAs:
6.94021
Total prob of N-in:
0.34936
outside
1  -  778
 
 

Population Genetic Test Statistics

Pi
4.123353
Theta
5.447376
Tajima's D
-1.512714
CLR
0.223897
CSRT
0.0518974051297435
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
31250652 TLQPIPKKPIDKAASETDAEIKPIERAVEARSTDDAYGSMVRCLYFARTFLINSQYFNALSRT 98.18 0.0
25044914 RIEQEREER 100.00 5e-09
28467696 RIENEREEITAAYK 100.00 5e-09
25044914 IEQPTIIISMIVK 100.00 3e-08
28556443 TVYDETIIDDR 100.00 3e-04
28556443 YILPLDLITR 100.00 0.020
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