SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00105
Pre Gene Modal
BGIBMGA002121
Annotation
PREDICTED:_uncharacterized_protein_LOC105392398_[Plutella_xylostella]
Location in the cell
Cytoplasmic   Reliability : 1.104 Nuclear   Reliability : 1.595
 

Sequence

CDS
ATGGCCACTGCTCGTGGCTTCTTCTTCGACGACGAGACGGGCGAGTTGGTCACTTACGGTGTGAACGAAGAAACTGGCGAGCCGATGGTTAATAATCCAACGGTGTCCTTTTTTGGAACACCTCGGCCCATTCCACCGATGGAGACTCCGAATTTTCCAGAAGGTCCAATGAGTCAGACAAAGAAGTTTCAAGCACTCAAGGAAAACATAATCGCAGGCTCCAATCCCATTAGCCACCGCATGCTGCTCTTTCCATCCGTGATGATTTTTCCGGAGCTCTTCTGTGTTCTGCTCCTCATTCTAGAGGTGTATCTACATGTGAAGTGCCACAAGAAGAACAAAAAATTAAAAGATCAAAACTTGTACTACCGAAGTCCGTTTCATGTCGTAACAAGTACTTTCTGTGGAGCATGCCGTGAAAGTGAGCTGGCTTCTAGGATAGGGCAGATGCAAGACAAGCGACGCAATCGTTACGACTACTTCAGAGGGATTGCCATATAA
Protein
MATARGFFFDDETGELVTYGVNEETGEPMVNNPTVSFFGTPRPIPPMETPNFPEGPMSQTKKFQALKENIIAGSNPISHRMLLFPSVMIFPELFCVLLLILEVYLHVKCHKKNKKLKDQNLYYRSPFHVVTSTFCGACRESELASRIGQMQDKRRNRYDYFRGIAI

Summary

EMBL
BABH01015868    ODYU01005124    SOQ45680.1    NWSH01005960    PCG63794.1    KZ149901    + More
PZC78518.1    JTDY01001556    KOB73545.1    GDQN01011742    GDQN01008230    GDQN01005536    GDQN01001167    JAT79312.1    JAT82824.1    JAT85518.1    JAT89887.1    DS231857    EDS38660.1    AJVK01066001    GDAI01002298    JAI15305.1    GFDF01010860    JAV03224.1    GGFL01006184    MBW70362.1    GFDL01007026    JAV28019.1    ADMH02001752    ETN61177.1    CH477984    EAT34607.1    JXUM01045968    KQ561457    KXJ78513.1    KQ971330    EEZ99759.1    GGFL01003311    MBW67489.1    GGFL01000390    MBW64568.1    APCN01002303    AAAB01008960    EAU76624.2    GGFJ01009075    MBW58216.1    GGFJ01009181    MBW58322.1    GGFJ01009180    MBW58321.1    ATLV01024498    KE525352    KFB51481.1    GGFK01010636    MBW43957.1    GAMD01003259    JAA98331.1    JR048214    AEY60599.1    KZ288255    PBC30687.1    GFDL01006957    JAV28088.1    KK107078    EZA60304.1    QOIP01000011    RLU16957.1    GL763185    EFZ20086.1    CVRI01000042    CRK95465.1    GEZM01103179    JAV51480.1    GL448450    EFN84635.1    GALX01007074    JAB61392.1    APGK01026507    KB740635    ENN79823.1    KB631992    ERL87770.1    CH940647    KRF84574.1    EDW69789.1    GALX01002981    JAB65485.1    CH916366    EDV96844.1    AF145665    AE014296    AAD38640.1    AAF47601.1    AGB93997.1    LJIG01009730    KRT82496.1    GBYB01006139    JAG75906.1    GAKP01012071    GAKP01012069    JAC46883.1   
Pfam
PF00155   Aminotran_1_2        + More
PF01553   Acyltransferase
PF16076   Acyltransf_C
Interpro
IPR004839   Aminotransferase_I/II        + More
IPR015424   PyrdxlP-dep_Trfase       
IPR015421   PyrdxlP-dep_Trfase_major       
IPR015422   PyrdxlP-dep_Trfase_dom1       
IPR032098   Acyltransf_C       
IPR002123   Plipid/glycerol_acylTrfase       
SUPFAM
SSF53383   SSF53383       
Gene 3D

Ontologies

Topology

Length:
166
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
21.73294
Exp number, first 60 AAs:
0.00017
Total prob of N-in:
0.01280
outside
1  -  82
TMhelix
83  -  105
inside
106  -  166
 
 

Population Genetic Test Statistics

Pi
7.315977
Theta
11.483229
Tajima's D
-0.777528
CLR
0.79786
CSRT
0.184540772961352
Interpretation
Uncertain
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