Gene
KWMTBOMO00099
Pre Gene Modal
BGIBMGA002116
Annotation
PREDICTED:_roquin-1_isoform_X4_[Bombyx_mori]
Location in the cell
Nuclear Reliability : 3.755
Sequence
CDS
ATGCCAATTCAGGCGCCTCAGTGGACGGACTACCTAACCTGTCCGGTGTGCTGCCGAGAGTTCGGTGCTCCGCCCCGGAGTCCTATCAGCCTCAGCTGCGGCCACACCCTCTGTAGGCACTGTCTGATTCACCTTCATCGGAAACAATGCCCCTTCGACCAGACGATCATACAAGTTGAACCCGAGGAGTTGGTTGTGAACACGGCGCTGCTTCAGCTGGCGGGCTATGCGCCACCTTCGCAGCCGTATCAGCCGCCTTGTATCAAGGCTCTCCCGGAGTCGGACAGGCAGGCGTACGACACTGTTATACGCACCATGGAGGAACTTGCTGTATTCTTGAAATGCTCCGGAAACGCCAATATGAGTGGCAACGGGAATCGACTTTCGAGGCCTATGCAGAGGAAGCTGGTAACGCTGCTGCAGTGTTCGATAACAGACGAGGAAGGTCGGGGCAGGGCCGCACGGGCAGCCAGGTCTCTTGGTGAACGGACGGTCACTGAACTCATACTTCAACATCAGAATCCGCAGCAGCTAAGCGCCAACTTATGGGCGGCAGTGAGGGCGCGTGGTTGCCAATTCCTTGGTCCTGCTATGCAGGAAGAGGTGTTAAAATTGGTACTCCTCGCACTCGAAGACGGTTCCGCACTCTCCCGAAAGGTACTAGTGATGTTTGTGGTTCAAAGACTGGAGCCGCATTTTCCGCAGGCCTCAAAAACAAGCATCGGGCATGTAGTGCAGCTTCTGTACCGCGCCTCATGTTTTAAGGTATCGAAAAGGGAGTCAGATTCGTCGCTCATGCAACTCAAGGAGGAATTCCGTACGTACGATTCATTGAGGCGCGAACACGACGCTCAGATAGTTCAGATCGCCACCGAATCAGGTTTGAGAATCGCACCCGATCAGTGGAGTGCTTTGTTGTATGGCGACACCGCGCATAAGAGTCACATGCAGAGCATCATAGATAAATTACAGACGCCTCAGTCATTTGCCCAATCGGTCCAAGAGCTGTTTGTCGCGCTGCAACGTACCGGAGACCCGGAACAACTGGTGACAATGAGCATGCATCTCGATAAACTCGCAAACATCGACGCCAACGCCGATGCTAAAAGCCCAACATGGAAGCAAATGGCCGATGTGATGACGTCATTAAAGGAGGTTGTGATCGGACTGATCAATTACATTCAGCAACAAGCGGCCGGAAAAGACATGAACCAAGGGCAAAAGGATCTACGAAACGAACCATCAACTAGTCAATCATCACCGCAAGCCCGTACGACACCGACACCTACCCAGGGGAGGTACAAGATGGCTATGTGTAAGGATGTTCTGAGATCATTGTGTCCGAGGGGAAATTCATGCATGTATGCACATTCTGAAGAGGAACTAGAAAGATATCGAGCGATGATGGCAAACATAAATGGACACTTTCAGTTCATGCCCGGGATAGTAGGAGTGCCCGCTCTCCAGCATGGACTGACGCCGATGCAACCTGGCTTGGCACCGATCCTACCTGGTCAGCCAATACACATAATTCCCAACATGTATAATCAATTCGCGATGCCACAACACGTCGACCCCTCTGCTTTCGGTGCCCAGTCCATGCAGGGAATGCCGCCTCAATCGATGCAGTCGCAAGGAATCCAACCACAATCAATGCAATCCCAGGGAATCCAACCGCAATCGATGCAACCCCAAGGAACCACACTGCAATCTATGCAATCCCAAGGAATGCAACCTCAATCGATGCAATCTCAGGGAATCCAGTCACAATCGATACAACCCCAAGGAGTCCAACCGCAATCGATGCAATCCCAGAGTATCCAACCACAATCAATGCAAGCCCAAGGAATCCAAACGCAATCGATGCAACCCCAGGGACTGCAATCGCAGCCACAGGGATTACGGCCCGTGCAGGCTGCCTCTGTGGAAATGCCCGAACTGATTGACCTGCAACAAAATCCGAATTTCGTTCAACAAAATATGCCGTCGGGTCCGCGTCGCATCTACGATCTTAACTCTGGCAATCCGAACTTTAACTTCGCCCAGCAGTATCAGCACCCTGAGTATCCGACTTCGGTGTATGGGGTGCCGGAAGGATCCAACCAAATGTACATGCCGACGGCTTCTAACCTCTACCCCTTCGAAGACGGAGCAGCGCCAATCCAGTCCCCGATCGACATCCGTTCTGAATTGCGATCCGACATCCGCGTGAACATCCCGGCTCCGCAGTATCCTTCGATGCATCACGTCCCGAGGACCGAAGTGACCTGGCCAGTTGGGCCGATGCCCCCGATATCCCAGATGTCTCAAGGACAACAAGTGCCCCCCGGCCCACAGGTATACGCTTTCGAAAATATCCGTGATGCTCTGCCAACTGTAGCTCGCAGCTCGGCCCCTCTAGACAGGCGTTTCCCATCCGATAGACGCGTCGTAGGATCCGAGCGTGGAGTACCTCCACCTCACCCGTCCTTTTTCGCGGACGGCGCCGAAGATCAACTCGAAGAGGAGCTACTCGCTCTAGAGCGTCGCATAGACACCGAATTCAAAAGCGCTGATTAG
Protein
MPIQAPQWTDYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQCPFDQTIIQVEPEELVVNTALLQLAGYAPPSQPYQPPCIKALPESDRQAYDTVIRTMEELAVFLKCSGNANMSGNGNRLSRPMQRKLVTLLQCSITDEEGRGRAARAARSLGERTVTELILQHQNPQQLSANLWAAVRARGCQFLGPAMQEEVLKLVLLALEDGSALSRKVLVMFVVQRLEPHFPQASKTSIGHVVQLLYRASCFKVSKRESDSSLMQLKEEFRTYDSLRREHDAQIVQIATESGLRIAPDQWSALLYGDTAHKSHMQSIIDKLQTPQSFAQSVQELFVALQRTGDPEQLVTMSMHLDKLANIDANADAKSPTWKQMADVMTSLKEVVIGLINYIQQQAAGKDMNQGQKDLRNEPSTSQSSPQARTTPTPTQGRYKMAMCKDVLRSLCPRGNSCMYAHSEEELERYRAMMANINGHFQFMPGIVGVPALQHGLTPMQPGLAPILPGQPIHIIPNMYNQFAMPQHVDPSAFGAQSMQGMPPQSMQSQGIQPQSMQSQGIQPQSMQPQGTTLQSMQSQGMQPQSMQSQGIQSQSIQPQGVQPQSMQSQSIQPQSMQAQGIQTQSMQPQGLQSQPQGLRPVQAASVEMPELIDLQQNPNFVQQNMPSGPRRIYDLNSGNPNFNFAQQYQHPEYPTSVYGVPEGSNQMYMPTASNLYPFEDGAAPIQSPIDIRSELRSDIRVNIPAPQYPSMHHVPRTEVTWPVGPMPPISQMSQGQQVPPGPQVYAFENIRDALPTVARSSAPLDRRFPSDRRVVGSERGVPPPHPSFFADGAEDQLEEELLALERRIDTEFKSAD
Summary
Uniprot
ProteinModelPortal
PDB
4TXA
E-value=4.44019e-144,
Score=1314
Ontologies
KEGG
GO
Topology
Length:
852
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00627
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00032
outside
1 - 852
Population Genetic Test Statistics
Pi
22.183738
Theta
24.153517
Tajima's D
-0.75261
CLR
0.008507
CSRT
0.184190790460477
Interpretation
Uncertain
