SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00097
Pre Gene Modal
BGIBMGA002115
Annotation
PREDICTED:_uncharacterized_protein_CG1161_[Papilio_polytes]
Location in the cell
PlasmaMembrane   Reliability : 2.204
 

Sequence

CDS
ATGTATCTGAAATATATTATTTTAGTGTTTCTTGGAACGTGCATCTTCTTTGTGTCTGGCACTTTTGAGAACAAACGTTGCAAGTGTGTGTGTCCGAGCCCCGCAGCTGTCTTCAATAACACTGCTGACACAGGACGCAGTCCGTTTATCGACAATGTGCCTCCTAATAAATGCAACTGTGAAGGCCTAGTGCTACCCCGAATTGGAGACCAACTCAAAGATCGTGCTCAAGAATTTTGTCCCCGTTGTCAGTGCAAATATGAGAACAGAAACATCACAATTATAAAGGTAGTGGTGATTATTGTTATCTGGGTGATCATGTTGCTGGTGGGGTACATGGGTTTCCTGATTTGTTTGGATCCTCTAATCAACAAGCGAGCCATGGCATCATATCAGGAGCATACCAATGAGGATGATGACAACCCTATACCAGGAACGTCTCAGACGATGGGTGCAACTCCCCGCGGGAATGTTTTGAACCGGGTTACCCATCAGCAGGACAAGTGGAAGCGTCAGGTCCGTGAGCAGCGTCGCAACATTTATGATAGACACACTATGTTGAACTAG
Protein
MYLKYIILVFLGTCIFFVSGTFENKRCKCVCPSPAAVFNNTADTGRSPFIDNVPPNKCNCEGLVLPRIGDQLKDRAQEFCPRCQCKYENRNITIIKVVVIIVIWVIMLLVGYMGFLICLDPLINKRAMASYQEHTNEDDDNPIPGTSQTMGATPRGNVLNRVTHQQDKWKRQVREQRRNIYDRHTMLN

Summary

EMBL
BABH01015823    KZ150037    PZC74619.1    AGBW02009564    OWR50419.1    KQ459463    + More
KPJ00554.1    NWSH01001084    PCG72709.1    KQ461108    KPJ09087.1    DS231833    EDS32248.1    GFDL01007751    JAV27294.1    CH477491    EAT40023.1    GFDF01011074    JAV03010.1    KC740768    AGM32592.1    GAPW01005057    JAC08541.1    AJWK01001776    JXUM01039167    JXUM01039168    KQ561193    KXJ79409.1    ATLV01015326    KE525006    KFB40342.1    GALA01000788    JAA94064.1    KK852598    KDR20537.1    AXCN02000544    KQ981560    KYN39850.1    AAAB01008807    EAA04310.4    GALX01001614    JAB66852.1    GL888828    EGI57730.1    APCN01000180    DS234996    EEB10164.1    KQ979878    KYN18691.1    KQ414699    KOC63429.1    KK107260    QOIP01000001    EZA54249.1    RLU26241.1    KQ976438    KYM86874.1    ADTU01012403    GGFJ01009623    MBW58764.1    GGFM01002314    MBW23065.1    GANO01004120    JAB55751.1    KQ971334    EEZ99657.2    GGFK01007392    MBW40713.1    GL438137    EFN69503.1    EU934396    ADMH02002078    ACI30174.1    ETN59499.1    GL449994    EFN81610.1    KQ435891    KOX69404.1    GBYB01000472    JAG70239.1    KQ977796    KYM99618.1    GEZM01030096    JAV85811.1    GEZM01030097    JAV85810.1    KZ288212    PBC32831.1    NNAY01001263    OXU24568.1    AXCM01004785    GDQN01009115    JAT81939.1    GDIQ01178681    JAK73044.1    GDIQ01199578    JAK52147.1    KK119091    KFM74667.1    GDIP01235055    JAI88346.1    GL732574    EFX75498.1    GDIQ01095263    JAL56463.1    APGK01026508    KB740635    KB631992    ENN79825.1    ERL87768.1    GDIP01189400    JAJ34002.1    GDIP01043165    LRGB01000872    JAM60550.1    KZS15356.1    GDIP01215855    JAJ07547.1    GDIP01121757    JAL81957.1    GDIQ01200876    JAK50849.1    GECU01028502    JAS79204.1    GECZ01029289    GECZ01027354    JAS40480.1    JAS42415.1    CVRI01000054    CRL00215.1    EU252459    ACD12008.1    GEFM01000782    JAP75014.1    GFJQ02008283    JAV98686.1    JH431809    GADI01008360    JAA65448.1    GACK01008412    JAA56622.1    NEVH01002981    PNF41238.1    GFWV01022530    MAA47257.1    GANP01008093    JAB76375.1    GEDV01004721    JAP83836.1    GFPF01010908    MAA22054.1    ABJB010036788    ABJB010420628    DS687722    EEC04479.1    GFWV01001475    MAA26205.1    GDIQ01095264    JAL56462.1    GDIQ01011810    JAN82927.1    GBBL01002033    JAC25287.1    AJVK01015792    GBBM01000328    JAC35090.1    GFAC01006894    JAT92294.1    GBZX01000265    JAG92475.1    GBBK01001958    JAC22524.1    GFAA01000440    JAU02995.1    GBBK01001931    JAC22551.1    GEDC01031150    JAS06148.1    LNIX01000006    OXA52993.1    GEZM01030098    JAV85809.1    UFQT01001596    SSX31102.1    UFQS01001600    UFQT01001600    SSX11553.1    SSX31120.1    GDIQ01095262    JAL56464.1    GBHO01015180    GBHO01015179    GDHC01011015    JAG28424.1    JAG28425.1    JAQ07614.1    GDIP01182255    JAJ41147.1    GEHC01001356    JAV46289.1   
Pfam
PF05434   Tmemb_9
Interpro
IPR008853   TMEM9       

Ontologies

Topology

SignalP
Position:   1 - 20,         Likelihood:  0.991924
 
 
Length:
188
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
40.66984
Exp number, first 60 AAs:
17.86537
Total prob of N-in:
0.07247
POSSIBLE N-term signal
sequence
outside
1  -  4
TMhelix
5  -  22
inside
23  -  96
TMhelix
97  -  119
outside
120  -  188
 
 

Population Genetic Test Statistics

Pi
14.497066
Theta
16.186705
Tajima's D
-0.569998
CLR
0.09577
CSRT
0.230388480575971
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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