Gene

KWMTBOMO00095  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA002359

Annotation

Zinc_finger_DNA_binding_protein_[Operophtera_brumata]

Location

Bomo_Chr1(-):2742543-2743746      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.054

CDS

ATGCATTGTGAGGGTTGCACTACAAAATTATGCAAGGAAAAATTTAAGTGCAATAAATGTGCTTCAGAATACTGCTTTGATTGCCTGAATATTGCTTCCGCTTCAAGGAAACAATTAAGCGCTAAGCAAATTGCGTCTTTAAGCTGTCCTTCTTGTCAAAACGTTACGAAACGTAAAACTAACTGCAATACTCCGATCCACAAGCGTCCTGATTTGAATGACACTGTCAATGCTTCTTCCTCTTTTACTTCCTACGACTCGACTGCAGTGGATGCTTCCTCGGACATGGAATCGATCAGCGGACAAGTGACCTTGGAGAGCATAGGGCAGCTTCTCGATATGAAACTAGCGCCTGGCTCTTCGTTCATGACTCATTTGCGATCCTCGCTTAGGAAGGATATCACAGAAATGGTGTCTCAGGAGGTTAATCGTGCTGTTGAGGGCTTGAGAGTGGATTTCTCGCAAACGACGGATTTCATGTCTGCTGAGCAGAAAAGTATCCGATCCAAAATTTGTGATAAGGAAAAAGAAATCGAGTTACTCAGACTACAACTTAATAAAACCGGGGAATCTTTACACAGGCTTCAGAATCGAGTTTCTATGGTGGAGAAAATTTCTCGAGACCTTAATATTGAGATTCACGAAGTTCCGGAGAATAATCATGAGAACCTTAATCACTTATTTAAAAAACTTTGTGAGTGTTTGAGTGTCAACATATCTGATGCAGATATCAAATCTTGTCGTCGAGTTGCTAAAATGAATCCTGACTCGAGAAGGCCAAGAAATATACTAATCTCACTGTCATCCCAGCGTCTTCGTGATGAGGTTCTATCTGCGTTTACTAGGTATAACAAGTCTAATTCAAAAAATAAGCTTGGAACCGCTCACGTCGGCTTAACATGCGCGGTTTCAAGGATTTATGTATCTGAGCATCTCTCTCCTGAGGCTAAGGAACTTCATAGCATGGCTAGAAAACTGAGCAAAGAGAAAAATTATAAATTTGTTTGGGTTCGTTTTGGTCAAATTTATATTCGAAAGGACGAGAAATGTCCCGCAGTTCATATTAAAAATATTGAAATTATTAATAAACTGAGAAACGAGTAA

Protein

MHCEGCTTKLCKEKFKCNKCASEYCFDCLNIASASRKQLSAKQIASLSCPSCQNVTKRKTNCNTPIHKRPDLNDTVNASSSFTSYDSTAVDASSDMESISGQVTLESIGQLLDMKLAPGSSFMTHLRSSLRKDITEMVSQEVNRAVEGLRVDFSQTTDFMSAEQKSIRSKICDKEKEIELLRLQLNKTGESLHRLQNRVSMVEKISRDLNIEIHEVPENNHENLNHLFKKLCECLSVNISDADIKSCRRVAKMNPDSRRPRNILISLSSQRLRDEVLSAFTRYNKSNSKNKLGTAHVGLTCAVSRIYVSEHLSPEAKELHSMARKLSKEKNYKFVWVRFGQIYIRKDEKCPAVHIKNIEIINKLRNE

Uniprot

A0A0L7K2U8   A0A0L7LTI6   A0A2H1W956   A0A194QEB0   A0A0L7K3N5   A0A0L7LEU2   + More
A0A2A4IXU4   A0A0L7L1J8   A0A0L7LEV4   A0A0L7K4K4   A0A0L7KQ92   A0A2A4IUX2   A0A2H1W5G4   A0A0L7K3E6   A0A2A4JC78   A0A2A4IU35   A0A0L7L3E9   A0A2A4K1S6   A0A2A4IUU8   A0A2H1WBH0   A0A2H1V294   A0A2A4JBL7   A0A2W1BYU6   A0A0L7K4I6   A0A2A4IZ89   A0A0L7LF48   A0A0L7K2E3   A0A0L7KUP7   A0A2W1BT87   A0A2A4IYB9   A0A2H1VJZ0   A0A2H1X1K9   A0A2H1WYV3   A0A1Y1JXQ1   A0A2H1WVR8   A0A2A4IZ17   A0A2W1BEV5   A0A0L7LS11   A0A2H1WI81   A0A2A4J0K9  

Pubmed

26227816    26354079    28756777    28004739   

EMBL

JTDY01013334    JTDY01001687    KOB52155.1    KOB73157.1    JTDY01000136    KOB78669.1    + More
ODYU01007128    SOQ49629.1    KQ459054    KPJ03878.1    JTDY01012405    KOB52279.1    JTDY01001361    KOB74078.1    NWSH01005418    PCG64228.1    JTDY01003535    KOB69383.1    JTDY01001411    KOB73935.1    JTDY01010989    KOB57787.1    JTDY01007401    KOB65231.1    NWSH01006948    PCG63178.1    ODYU01006462    SOQ48321.1    JTDY01014577    KOB52017.1    NWSH01002032    PCG69366.1    NWSH01007563    PCG62908.1    JTDY01003264    KOB69846.1    NWSH01000267    PCG77878.1    NWSH01007173    PCG63054.1    ODYU01007238    SOQ49844.1    ODYU01000349    SOQ34960.1    NWSH01002191    PCG68944.1    KZ149914    PZC78000.1    KOB57786.1    NWSH01004298    PCG65247.1    JTDY01001455    KOB73826.1    JTDY01015045    KOB51976.1    JTDY01005451    KOB66988.1    KZ150018    PZC74943.1    NWSH01005479    PCG64170.1    ODYU01002971    SOQ41143.1    ODYU01012701    SOQ59142.1    ODYU01012049    SOQ58146.1    GEZM01097808    JAV54094.1    ODYU01011375    SOQ57082.1    NWSH01005158    PCG64392.1    KZ150150    PZC72841.1    JTDY01000700    JTDY01000218    KOB76170.1    KOB78232.1    ODYU01008832    SOQ52780.1    NWSH01003975    PCG65605.1   

Proteomes

UP000037510    UP000053268    UP000218220   

Pfam

PF03258   Baculo_FP        + More
PF00628   PHD
PF14529   Exo_endo_phos_2

Interpro

IPR004941   Baculo_FP        + More
IPR001965   Znf_PHD       
IPR013083   Znf_RING/FYVE/PHD       
IPR019787   Znf_PHD-finger       
IPR011011   Znf_FYVE_PHD       
IPR019786   Zinc_finger_PHD-type_CS       
IPR004244   Transposase_22       
IPR036691   Endo/exonu/phosph_ase_sf       
IPR005135   Endo/exonuclease/phosphatase       
IPR001841   Znf_RING       
IPR002219   PE/DAG-bd       

SUPFAM

SSF57903   SSF57903        + More
SSF56219   SSF56219       

Gene 3D

3.30.40.10     3.60.10.10    

ProteinModelPortal

A0A0L7K2U8   A0A0L7LTI6   A0A2H1W956   A0A194QEB0   A0A0L7K3N5   A0A0L7LEU2   + More
A0A2A4IXU4   A0A0L7L1J8   A0A0L7LEV4   A0A0L7K4K4   A0A0L7KQ92   A0A2A4IUX2   A0A2H1W5G4   A0A0L7K3E6   A0A2A4JC78   A0A2A4IU35   A0A0L7L3E9   A0A2A4K1S6   A0A2A4IUU8   A0A2H1WBH0   A0A2H1V294   A0A2A4JBL7   A0A2W1BYU6   A0A0L7K4I6   A0A2A4IZ89   A0A0L7LF48   A0A0L7K2E3   A0A0L7KUP7   A0A2W1BT87   A0A2A4IYB9   A0A2H1VJZ0   A0A2H1X1K9   A0A2H1WYV3   A0A1Y1JXQ1   A0A2H1WVR8   A0A2A4IZ17   A0A2W1BEV5   A0A0L7LS11   A0A2H1WI81   A0A2A4J0K9  

KEGG

NA   

GO

GO:0046872   GO:0035556  

PANTHER

PTHR11505  

Length:

367

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00829

Exp number, first 60 AAs:

0.00016

Total prob of N-in:

0.02623

outside

1  -  367

 

 

Pi

39.384001

Theta

43.272401

Tajima's D

-0.219172

CLR

0

CSRT

0.309384530773461

Interpretation

Uncertain