Silkworm Genome Informatics Database

Gene

KWMTBOMO00093

Pre Gene Modal

BGIBMGA014489

Annotation

PREDICTED:_uncharacterized_protein_LOC105842500_[Bombyx_mori]

Location

Bomo_Chr1(-):2666468-2668286 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.225

CDS

ATGACATCCTCGGGAGTTAACCTATTCCATCTGCCCTCAGAGACACCCATCACTGAGGTTAGGTTTTCGCCAACAGGTGGAGACGGCTCTGATGATGAGACTTATTCCGCGAGCCTAAGCGCAGTACTACGGCAGCGCCGCGCCAGCGTGAGGAGGTCACGTAAGGGTCGCACCAGGAGACCATCGTCACCATTCATGAACGATGAGAGCAGGCCGCGGCGACGGTCTTCTGTTTTCACAACCAGCTCTGGGGAGTAA

Protein

MTSSGVNLFHLPSETPITEVRFSPTGGDGSDDETYSASLSAVLRQRRASVRRSRKGRTRRPSSPFMNDESRPRRRSSVFTTSSGE

Uniprot

H9JY71 A0A0L7L5K6 A0A2H1VLU9 A0A2W1BHU5 A0A2A4JY15 A0A194QAV0 + More
A0A194QUU3 A0A212F9K7

Pubmed

19121390 26227816 28756777 26354079 22118469

EMBL

BABH01042400 BABH01042401 JTDY01002803 KOB70690.1 ODYU01003268 SOQ41801.1 + More
KZ150037 PZC74622.1 NWSH01000451 PCG76320.1 KQ459463 KPJ00551.1 KQ461108 KPJ09084.1 AGBW02009564 OWR50422.1

Proteomes

UP000005204 UP000037510 UP000218220 UP000053268 UP000053240 UP000007151 + More

PRIDE

H9JY71

Pfam

PF07810 TMC

Interpro

IPR012496 TMC_dom + More
IPR038900 TMC

ProteinModelPortal

H9JY71 A0A0L7L5K6 A0A2H1VLU9 A0A2W1BHU5 A0A2A4JY15 A0A194QAV0 + More
A0A194QUU3 A0A212F9K7

KEGG

105842500 no KO assigned | (RefSeq) uncharacterized LOC105842500

GO

GO:0005887

PANTHER

PTHR23302

Length:

85

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00018

Exp number, first 60 AAs:

0.00018

Total prob of N-in:

0.12390

outside

1 - 85

Pi

26.30404

Theta

27.571693

Tajima's D

-0.361113

CLR

0.004221

CSRT

0.274736263186841

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics