Gene

KWMTBOMO00086

Pre Gene Modal

BGIBMGA002020

Annotation

PREDICTED:_pyruvate_dehydrogenase_phosphatase_regulatory_subunit?_mitochondrial_isoform_X1_[Papilio_machaon]

Location

Bomo_Chr1(-):2517715-2531756      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.912 Mitochondrial   Reliability : 1.312

CDS

ATGTTGGGAGGCTGTCTGAAAGGTGGCATTGACAAGTGTAATTTGTATAGAGTTGCCGGTGTCCTCAATAGGCGGTTTTCGAGCCGCTTAGATGCATTGGACTACGAAGAAAAATTAGAAGATTGCTTGTCAGTACTACCATCCAAAGCAAAGGTGGTAATATGCGGCGGGGGTGTAATGGGGGCGGCTGTCGCGTACCACCTGGCCAACCGGGGGTGGGGTGACAGAACCGTAGTCGTCGAGAAAGAAAAAGTGGGTGCAGGGAGTCGCTGGCATTCATCAGGCCTTGTTGGAGCATTCAAGCCAACACTTGCTCAGGTGAGGCTTGCCCAGTCCTCAATTAGGCTTCTTAAGGAGCTTGAGGCTCGTGGTAGGCCCACAGGGTGGAAACAATGTGGTTCACTATTATTGGCAAGAACAAGAGACCGCATGACTGTTTACAGAAGAATGAAAAGTCAGTCTGTATCGTGGAGCATAGATTGTGACTTAGTTACACCAAAGAAATGTCATGAATTATTTCCAATGCTGAATGTTGAAGATGTGCTTGGAGGCCTGTGGATTCCAGGTGATGGTGTAGGAGACCCGCATTTGCTCTGTATGTCTCTTATGAGAGAAGCAACTGATAAAGGTGTGGGTGTGATGGAAGATTGTTCTGTGACAGCTGTGCTATCGAAAGACGACAAAGTGTCTGGAGTGGAAACTACAAATGGTGCAATCGAGTGTGATTACTTTATCAACTGTGCGGGCTTTTGGGCTAGACAGGTCGGACAGTTGGCACGACCGCAGGTGAAAGTACCCTTACTACCATGTGAACATTACTATCTGCATACCAAGCCCATTGATAATCTTGATCCAATGACTCCAGTCATCCGAGACCCAGATGGTTATATATATCTTCGAGAAAGAGATGGATGCATTTTAGCAGGTGGATTCGAACCAATTGCGAAACCTGTTTATGAGGAAGAAATCGAGAACGCGTCACAACGTTGTTTGCCCGAAGACTGGGATCACTTCCACGTGTTGCTGCAGGAGTTGCTGCAACGGGTGCCCGGTCTGAACCAGGCCGTGCTCCACAAGCTGTGCAATGGACTAGAGGCATTCTCTCCTGACTGCAAGTGGATCGTTGGAGAAGCACCAGAGATGTTGAACTACCACGTGGCGGCCGGCATGAAGACTGTGGGCATATCCGCTGCCGGTGGCGTCGCTGAGGCGACGGTTGACGAGATCATCGACGGCTACAGCAAGTACGATATGCATGAGTTGGGCGTCAATCGTTTCCTTGGACTGCACAACAACAAGAGATTCCTTAGAGACCGCGTTAAGGAGGTTCCAGGCGTTCATTACGGCCTTCCGTATCCGTTCTACGAATTCGAGACTGGTCGTAACTTGCGCTTGTCTCCCATCTACCCGACACTGAGAGACAACGGAGCAGTCTTCGGTCAGGTTATGGGCTACGAGAGACCAACGTGGTTCGAGACCGTAGAGAATGAGAGCGAGAAACCGCGTCCGTTCAAGATAGCGCACACGAGAACTTTCGGGAAGCCGCCCTGGTTCGACGCGGTGCAGCGTGAGTACTGGGCGTGCCGGGAGCGGGTCGGCCTCTCCGACTACTCCTCCTTCACCAAGATAGACATACAGTCTCAAGGTCGCGAGGTGGTGGAACTCCTGCAGTATCTCTGTTCCAACGACGTGGACGTTCCCGTCGGGAGTATCATTCACACTGGAATGCAGAACGAGCGAGGGGGTTACGAGAATGACTGCAGCCTGGCTAGGATATCGGAGAACCATTACATGATGATAGCTCCGACGATCCAGCAGACGCGCTGCAAGGTGTGGCTGAAGCGACACCTGCCCAGCAATGGTTCGGTGACCCTCTCCGACGTGACGTCGATGTACACCGCCATCTGCGTCATGGGTCCGTTCACGAGGAGTTTGCTCTCCGAACTGACCGACACTGACCTGTCGCCTTCGAACTTTCCGTTCTTCACGTTCAAGGAGATCGACGTCGGTCTGGCCAATGGGATTCGGGCGATGAATCTGACGCACACCGGAGAGCTGGGATATGTGCTCTATATACCTAACGAGTTTGCTCTCCACGTGTACAATCGCCTGATGACTGTGGGTGAGAAGTACGGGATAAGCCACGTCGGTTATTATGCGTCGCGTGCGCTACGCGTCGAAAAGTTCTTCGCTTTTTGGGGCCAGGATCTCGATACGATGACGACTCCTCTAGAATGTGGACGCACGTGGCGTGTTAAATTCGACAAAGACATAAAGTTCATCGGTCGGGATGCCCTCCTGAAGCAGCGGGAGGACGGTATCCGACGTCAATATGTCCAATTGTTGTTGACCGACCACGACCACGAGCTGGACCTTTGGTCGTGGGGCGGGGAGCCGATATATAGAGACGGGAACTATTGTGGTCAGACAACCACCACCAGTTACGGATTCACATTCAAGAAACAGGTATGCCTTGGTTTCGTCGAGAAACGCGATAAGGACGGTGTTACGCAGAAAGTTGACAACGATTACGTTCTGAGCGGCCATTATGAGATCGACATAGCCGGGATAAGGTACGCGGCAAAAGTAAATCTGCACTCCCCGAACTTACCAACGAAGTATCCCGACAAGGAACGCGACGTCTACCAGGCAACGAGGAAACTGCACGAGCCCCAACAGTTCCTCGGCCGGCATTACCAGCCGTAA

Protein

MLGGCLKGGIDKCNLYRVAGVLNRRFSSRLDALDYEEKLEDCLSVLPSKAKVVICGGGVMGAAVAYHLANRGWGDRTVVVEKEKVGAGSRWHSSGLVGAFKPTLAQVRLAQSSIRLLKELEARGRPTGWKQCGSLLLARTRDRMTVYRRMKSQSVSWSIDCDLVTPKKCHELFPMLNVEDVLGGLWIPGDGVGDPHLLCMSLMREATDKGVGVMEDCSVTAVLSKDDKVSGVETTNGAIECDYFINCAGFWARQVGQLARPQVKVPLLPCEHYYLHTKPIDNLDPMTPVIRDPDGYIYLRERDGCILAGGFEPIAKPVYEEEIENASQRCLPEDWDHFHVLLQELLQRVPGLNQAVLHKLCNGLEAFSPDCKWIVGEAPEMLNYHVAAGMKTVGISAAGGVAEATVDEIIDGYSKYDMHELGVNRFLGLHNNKRFLRDRVKEVPGVHYGLPYPFYEFETGRNLRLSPIYPTLRDNGAVFGQVMGYERPTWFETVENESEKPRPFKIAHTRTFGKPPWFDAVQREYWACRERVGLSDYSSFTKIDIQSQGREVVELLQYLCSNDVDVPVGSIIHTGMQNERGGYENDCSLARISENHYMMIAPTIQQTRCKVWLKRHLPSNGSVTLSDVTSMYTAICVMGPFTRSLLSELTDTDLSPSNFPFFTFKEIDVGLANGIRAMNLTHTGELGYVLYIPNEFALHVYNRLMTVGEKYGISHVGYYASRALRVEKFFAFWGQDLDTMTTPLECGRTWRVKFDKDIKFIGRDALLKQREDGIRRQYVQLLLTDHDHELDLWSWGGEPIYRDGNYCGQTTTTSYGFTFKKQVCLGFVEKRDKDGVTQKVDNDYVLSGHYEIDIAGIRYAAKVNLHSPNLPTKYPDKERDVYQATRKLHEPQQFLGRHYQP

Uniprot

A0A2W1BXT2   A0A194QU73   A0A212F9L9   A0A2J7QWV3   A0A2J7QWU2   D6WGA9   + More
N6T053   E2C0J5   E2AFR4   A0A0J7L4H8   A0A1Q3FF35   A0A1Q3FFS8   A0A023F461   A0A182R2U8   A0A1Q3FFL9   A0A158NAM6   A0A1S4FMS9   A0A182WAU6   Q16VJ0   A0A182Q1A7   A0A023EWM8   A0A026WLF6   A0A224X726   A0A195DQN8   A0A195CLD2   A0A182NN92   A0A182IKB4   A0A151XIH2   Q7Q2M2   F4W6V4   A0A182LPU8   A0A182G1Y4   A0A067R5Z2   A0A182K281   A0A151I694   A0A2A3EJU0   A0A182HGJ4   A0A3L8DCT8   A0A182YI71   J9K0C5   B0XBZ6   A0A232EST7   A0A182PNG5   A0A084W1B7   A0A2M4CVA4   A0A2M4AI98   A0A2J7QWU4   A0A2S2QJN3   A0A0L7QZ50   A0A2H8TN07   A0A1B6D3W9   E9J3K1   U5EU87   A0A1B6FLK8   A0A154PB33   A0A2H1V324   A0A1B6KYV5   A0A1B6L0J7   E0VHC3   A0A1Y1K630   A0A0A9WV29   A0A146L4D4   T1PCJ5   A0A1I8M5W6   A0A182FLS3   A0A195EVI8   A0A1B0C9I4   W8B260   A0A034VKT0   A0A0K8U533   A0A1L8E2H1   A0A1I8PX73   B4M7A7   B4L5R6   A0A0L0BTF1   B3MXF7   A0A3B0KRM2   Q29J50   B4NP81   A0A0M4ETX9   A0A1A9VCK3   B4R4H6   A0A1B0GA17   Q9W4K8   A0A1W4V232   A0A1A9ZEI2   A0A1A9XBV0   A0A1B0BE01   B4Q063   B3NU25   A0A1A9WT20   Q8MQN6   B4JKC8   T1IHI3   B4I0Z6   A0A0P5RUW1   A0A0P6HC22   A0A0P6FBP3   A0A0P5S5F8  

Pubmed

28756777    26354079    22118469    18362917    19820115    23537049    + More
20798317    25474469    21347285    17510324    24945155    24508170    12364791    14747013    17210077    21719571    20966253    26483478    24845553    30249741    25244985    28648823    24438588    21282665    20566863    28004739    25401762    26823975    25315136    24495485    25348373    17994087    26108605    15632085    23185243    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304   

EMBL

KZ149952    PZC76573.1    KQ461108    KPJ09078.1    AGBW02009564    OWR50427.1    + More
NEVH01009418    PNF33055.1    PNF33057.1    KQ971329    EFA01139.2    APGK01057365    APGK01057366    KB741280    KB631604    ENN70883.1    ERL84603.1    GL451800    EFN78512.1    GL439124    EFN67725.1    LBMM01000672    KMQ97817.1    GFDL01008881    JAV26164.1    GFDL01008636    JAV26409.1    GBBI01002441    JAC16271.1    GFDL01008705    JAV26340.1    ADTU01010381    ADTU01010382    CH477590    EAT38581.1    AXCN02001901    GAPW01000141    JAC13457.1    KK107167    EZA56486.1    GFTR01008171    JAW08255.1    KQ980612    KYN15161.1    KQ977642    KYN00894.1    KQ982108    KYQ60010.1    AAAB01008968    EAA13207.3    GL887762    EGI70067.1    JXUM01039375    JXUM01039376    KQ561202    KXJ79372.1    KK852680    KDR18611.1    KQ976413    KYM90356.1    KZ288223    PBC31960.1    APCN01006423    APCN01006424    APCN01006425    QOIP01000010    RLU18141.1    ABLF02040040    DS232664    EDS44559.1    NNAY01002374    OXU21423.1    ATLV01019258    KE525266    KFB44011.1    GGFL01005099    MBW69277.1    GGFK01007146    MBW40467.1    PNF33058.1    GGMS01008527    MBY77730.1    KQ414683    KOC63890.1    GFXV01003738    MBW15543.1    GEDC01016914    JAS20384.1    GL768066    EFZ12581.1    GANO01002432    JAB57439.1    GECZ01018705    JAS51064.1    KQ434846    KZC08438.1    ODYU01000239    SOQ34684.1    GEBQ01023350    GEBQ01016099    JAT16627.1    JAT23878.1    GEBQ01029402    GEBQ01022802    JAT10575.1    JAT17175.1    DS235165    EEB12779.1    GEZM01091335    JAV56902.1    GBHO01033236    GDHC01014404    JAG10368.1    JAQ04225.1    GDHC01016513    JAQ02116.1    KA645865    AFP60494.1    KQ981954    KYN32275.1    AJWK01002378    GAMC01013968    JAB92587.1    GAKP01016522    JAC42430.1    GDHF01031965    GDHF01030562    GDHF01023846    GDHF01022617    GDHF01011659    GDHF01009361    JAI20349.1    JAI21752.1    JAI28468.1    JAI29697.1    JAI40655.1    JAI42953.1    GFDF01001173    JAV12911.1    CH940653    EDW62674.1    CH933811    EDW06525.1    JRES01001379    KNC23268.1    CH902630    EDV38422.1    OUUW01000019    SPP89299.1    CH379063    EAL32452.1    KRT06028.1    CH964291    EDW86321.2    CP012528    ALC48435.1    CM000366    EDX17066.1    CCAG010018798    AE014298    BT150297    AAF45943.3    AGW24079.1    JXJN01012736    CM000162    EDX01215.1    CH954180    EDV45801.1    AY128477    AAM75070.1    CH916370    EDW00031.1    JH429910    CH480819    EDW53177.1    GDIQ01096329    JAL55397.1    GDIQ01022313    JAN72424.1    GDIQ01062449    JAN32288.1    GDIQ01242279    GDIQ01188644    GDIQ01132234    GDIQ01092191    GDIQ01063992    GDIQ01060501    JAL59535.1   

Proteomes

UP000053240    UP000007151    UP000235965    UP000007266    UP000019118    UP000030742    + More
UP000008237    UP000000311    UP000036403    UP000075900    UP000005205    UP000075920    UP000008820    UP000075886    UP000053097    UP000078492    UP000078542    UP000075884    UP000075880    UP000075809    UP000007062    UP000007755    UP000075882    UP000069940    UP000249989    UP000027135    UP000075881    UP000078540    UP000242457    UP000075840    UP000279307    UP000076408    UP000007819    UP000002320    UP000215335    UP000075885    UP000030765    UP000053825    UP000076502    UP000009046    UP000095301    UP000069272    UP000078541    UP000092461    UP000095300    UP000008792    UP000009192    UP000037069    UP000007801    UP000268350    UP000001819    UP000007798    UP000092553    UP000078200    UP000000304    UP000092444    UP000000803    UP000192221    UP000092445    UP000092443    UP000092460    UP000002282    UP000008711    UP000091820    UP000001070    UP000001292   

PRIDE

Q8MQN6   

Pfam

PF08669   GCV_T_C        + More
PF01266   DAO
PF16350   FAO_M
PF01571   GCV_T
PF14691   Fer4_20
PF07992   Pyr_redox_2
PF01180   DHO_dh

Interpro

IPR032503   FAO_M        + More
IPR027266   TrmE/GcvT_dom1       
IPR006222   GCV_T_N       
IPR036188   FAD/NAD-bd_sf       
IPR029043   GcvT/YgfZ_C       
IPR013977   GCV_T_C       
IPR006076   FAD-dep_OxRdtase       
IPR001295   Dihydroorotate_DH_CS       
IPR009051   Helical_ferredxn       
IPR005720   Dihydroorotate_DH       
IPR013785   Aldolase_TIM       
IPR028261   DPD_II       
IPR017896   4Fe4S_Fe-S-bd       
IPR017900   4Fe4S_Fe_S_CS       
IPR023753   FAD/NAD-binding_dom       

SUPFAM

SSF101790   SSF101790        + More
SSF51905   SSF51905       
SSF46548   SSF46548       

Gene 3D

3.30.1360.120     3.50.50.60     1.10.1060.10     3.20.20.70    

ProteinModelPortal

A0A2W1BXT2   A0A194QU73   A0A212F9L9   A0A2J7QWV3   A0A2J7QWU2   D6WGA9   + More
N6T053   E2C0J5   E2AFR4   A0A0J7L4H8   A0A1Q3FF35   A0A1Q3FFS8   A0A023F461   A0A182R2U8   A0A1Q3FFL9   A0A158NAM6   A0A1S4FMS9   A0A182WAU6   Q16VJ0   A0A182Q1A7   A0A023EWM8   A0A026WLF6   A0A224X726   A0A195DQN8   A0A195CLD2   A0A182NN92   A0A182IKB4   A0A151XIH2   Q7Q2M2   F4W6V4   A0A182LPU8   A0A182G1Y4   A0A067R5Z2   A0A182K281   A0A151I694   A0A2A3EJU0   A0A182HGJ4   A0A3L8DCT8   A0A182YI71   J9K0C5   B0XBZ6   A0A232EST7   A0A182PNG5   A0A084W1B7   A0A2M4CVA4   A0A2M4AI98   A0A2J7QWU4   A0A2S2QJN3   A0A0L7QZ50   A0A2H8TN07   A0A1B6D3W9   E9J3K1   U5EU87   A0A1B6FLK8   A0A154PB33   A0A2H1V324   A0A1B6KYV5   A0A1B6L0J7   E0VHC3   A0A1Y1K630   A0A0A9WV29   A0A146L4D4   T1PCJ5   A0A1I8M5W6   A0A182FLS3   A0A195EVI8   A0A1B0C9I4   W8B260   A0A034VKT0   A0A0K8U533   A0A1L8E2H1   A0A1I8PX73   B4M7A7   B4L5R6   A0A0L0BTF1   B3MXF7   A0A3B0KRM2   Q29J50   B4NP81   A0A0M4ETX9   A0A1A9VCK3   B4R4H6   A0A1B0GA17   Q9W4K8   A0A1W4V232   A0A1A9ZEI2   A0A1A9XBV0   A0A1B0BE01   B4Q063   B3NU25   A0A1A9WT20   Q8MQN6   B4JKC8   T1IHI3   B4I0Z6   A0A0P5RUW1   A0A0P6HC22   A0A0P6FBP3   A0A0P5S5F8  

PDB

4PAB     E-value=3.74233e-93,     Score=875

KEGG

101746594    K17509 pyruvate dehydrogenase phosphatase regulatory subunit | (RefSeq) pyruvate dehydrogenase phosp

GO

GO:0016491   GO:0050661   GO:0004159   GO:0017113   GO:0006212   GO:0006210   GO:0004152   GO:0042803   GO:0051536   GO:0003954   GO:0002058   GO:0005829   GO:0006207   GO:0005759   GO:0005739   GO:0005737   GO:0005515   GO:0007017   GO:0005200   GO:0005525   GO:0048013   GO:0005003   GO:0005887   GO:0007169   GO:0016021   GO:0055114  

Length:

901

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0807700000000001

Exp number, first 60 AAs:

0.03841

Total prob of N-in:

0.00390

outside

1  -  901

 

 

Pi

4.644179

Theta

16.387327

Tajima's D

-1.162696

CLR

0.056962

CSRT

0.104694765261737

Interpretation

Uncertain