Gene

KWMTBOMO00084

Pre Gene Modal

BGIBMGA002109

Annotation

PREDICTED:_SET_and_MYND_domain-containing_protein_4-like_[Plutella_xylostella]

Location

Bomo_Chr1(+):2483747-2486691      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.447

CDS

ATGAAAGCGACATATGCAAAAAAAAGAAGTGAATCTGACACAGCTACAAAATGTGATGAAATAGCATTACTATGGAGACAAAAAGGAAATGACAAGTTCCGATCTAACAATATTGAAGCAAGTTACAGTTACTATTCGAAAAGTGTCACATATGCCAACCAAACAGGCCCAATGTATCCTCTTGCACTTGCTAACAGATCAGCTGCACTGTTGCGATTGAAACGAAATGAGGACTGCTTGTCAGACATTAAACTGGCGATATCCAATGGCTACCCGTCAGAGTTACGTCACAAGCTCCTGCTCCGAAGAGCTGATTGTCTTATAGAGTTGTGCAGAACAGTTGCTGCACGAGAAGCATTGATTGAAGCAAAACAACATGCAGCTACACTAAAACTCTCCATGTCCCATAAAGGTGAGTTTGATCGCCATCTTTGTGATTTGGAAAAGAAACTGGAGGTTGTGAAAGATGTTGACCGTTCTGAAGAAGATGAGATACCTGATTTCTACATGGGAGAGAACGAGGAGTTTGTTTCTGCCTCCAACGCTTTACAATTGAAACGCAGCAAAGCAGCTGGTCGACACGTCGTAACCAAGAAAGCGACAAAACGAGGTGATGTCATATTCTCAGAGGAGCCGTACGCTTGTGTCACGTTGCCGAATGAAGGAGGGCGCTTAGTCTGCGAAACATGCTGTCGAACTGACATCAATACTGTTCCGTGA

Protein

MKATYAKKRSESDTATKCDEIALLWRQKGNDKFRSNNIEASYSYYSKSVTYANQTGPMYPLALANRSAALLRLKRNEDCLSDIKLAISNGYPSELRHKLLLRRADCLIELCRTVAAREALIEAKQHAATLKLSMSHKGEFDRHLCDLEKKLEVVKDVDRSEEDEIPDFYMGENEEFVSASNALQLKRSKAAGRHVVTKKATKRGDVIFSEEPYACVTLPNEGGRLVCETCCRTDINTVP

Uniprot

H9IXX6   A0A194QUR8   A0A212EQL3   A0A1E1WDI6   A0A2W1BID7   A0A2H1VMN2   + More
A0A2A4J7W7   A0A067QU06   A0A3L8DH39   A0A151IEA8   A0A151XJ38   A0A2J7PMN5   A0A2J7PMQ7   F4WVD9   A0A195BUX1   A0A158NEI7   K7JBH8   A0A232ET23   E9ID67   A0A195FLN3   U4U1L1   A0A1B6BYA9   A0A0P4WGQ5   L8IZM9   W5PY61   A0A210Q399   E1BEP0   A0A2P8Y7Z3   A0A026WXY1   A0A195ENZ1   K7J9J4   D6WFW8   A0A091D5G5   A0A088AC23   A0A0L7R9P0   A0A151LY23   E9G026   A0A232EY53   A0A3M6TQE6   A0A310SDC0   A0A154P9Z0   A0A0V0GCE2   A0A0P6BIH0   A0A0N7ZJ18   G5BCU9   A0A0B7ADG3   A0A0P4YBJ9   A0A0P5ZZQ8   A0A096P2B0   A0A0P5B4S1   A0A0P5K9U1   A0A0P5PBD3   A0A0P6ENT6   A0A3L7GM00   A0A0P5LGX4   T1IUA2   A0A0P5QLL6   H0X7R5   A0A0P6EYF5   A0A0P5CC54   A0A0P5PVD4   A0A3Q0CKS4   A0A0P5EM83   A0A0N8E5F9   A0A0P6F7S5   A0A0N8B7W5   A0A0P5YDB2   A0A0P5QU98   A0A0P5KRM3   A0A0P5H401   A0A2R2MMS8   A0A0P5XVE6   A0A0P6EBK0   A0A0P5L0G2   A0A0P6EEP7   A0A0P5G1M6   A0A0P5IEY9   A0A0N8E6B5   A0A0P5KHK2   A0A0N8CVX7   A0A0P5X9D4   A0A0N8D324   A0A0P5FDH5   A0A0P5CBV0   A0A0P4Y3P2   A0A0P5BES0   A0A0P6FV93   A0A0N8D1A7   A0A0P5H7K7   A0A0P5LGY3   A0A0P5NL24   A0A0P5G774   A0A0P5GBQ9   A0A0P5QFY3   A0A0P5CPW3   A0A0P5AZF7  

Pubmed

19121390    26354079    22118469    28756777    24845553    30249741    + More
21719571    21347285    20075255    28648823    21282665    23537049    22751099    20809919    28812685    19393038    29403074    24508170    18362917    19820115    22293439    21292972    30382153    21993625    29704459    26319212    28071753   

EMBL

BABH01015780    KQ461108    KPJ09059.1    AGBW02013268    OWR43786.1    GDQN01006028    + More
JAT85026.1    KZ150173    PZC72596.1    ODYU01003134    SOQ41514.1    NWSH01002782    PCG67540.1    KK853018    KDR12448.1    QOIP01000008    RLU19493.1    KQ977871    KYM99194.1    KQ982080    KYQ60347.1    NEVH01023969    PNF17604.1    PNF17607.1    GL888387    EGI61760.1    KQ976401    KYM92419.1    ADTU01013410    AAZX01003889    AAZX01019964    NNAY01002343    OXU21510.1    GL762454    EFZ21496.1    KQ981490    KYN41167.1    KB631992    ERL87759.1    GEDC01031343    GEDC01028325    GEDC01024336    GEDC01020734    GEDC01004590    GEDC01003971    GEDC01000924    GEDC01000193    JAS05955.1    JAS08973.1    JAS12962.1    JAS16564.1    JAS32708.1    JAS33327.1    JAS36374.1    JAS37105.1    GDRN01063833    JAI64923.1    JH880403    ELR61896.1    AMGL01017875    AMGL01017876    NEDP02005138    OWF43223.1    PYGN01000819    PSN40378.1    KK107064    EZA60897.1    KQ978625    KYN29622.1    AAZX01003778    AAZX01013600    AAZX01015471    AAZX01016734    AAZX01023809    KQ971328    EFA00946.1    KN123351    KFO25515.1    KQ414624    KOC67549.1    AKHW03007086    KYO17151.1    GL732528    EFX87160.1    NNAY01001628    OXU23384.1    RCHS01003183    RMX43576.1    KQ774368    OAD52317.1    KQ434844    KZC08204.1    GECL01001090    JAP05034.1    GDIP01014570    JAM89145.1    GDIP01240593    JAI82808.1    JH169574    EHB07110.1    HACG01031832    CEK78697.1    GDIP01229878    JAI93523.1    GDIP01040995    JAM62720.1    AHZZ02009503    AHZZ02009504    GDIP01189680    JAJ33722.1    GDIQ01188399    JAK63326.1    GDIQ01133217    JAL18509.1    GDIQ01059995    JAN34742.1    RAZU01001831    RLQ54678.1    GDIQ01177858    GDIQ01057549    JAK73867.1    JH431524    GDIQ01133218    JAL18508.1    AAQR03150429    AAQR03150430    AAQR03150431    AAQR03150432    AAQR03150433    AAQR03150434    AAQR03150435    AAQR03150436    AAQR03150437    AAQR03150438    GDIQ01057550    JAN37187.1    GDIP01172644    JAJ50758.1    GDIQ01123679    JAL28047.1    GDIP01144370    JAJ79032.1    GDIQ01059996    JAN34741.1    GDIQ01059994    JAN34743.1    GDIQ01204139    JAK47586.1    GDIP01073654    JAM30061.1    GDIQ01116476    JAL35250.1    GDIQ01180709    JAK71016.1    GDIQ01231735    JAK19990.1    GDIP01066745    JAM36970.1    GDIQ01065097    JAN29640.1    GDIQ01177857    GDIQ01063695    JAK73868.1    GDIQ01063696    JAN31041.1    GDIQ01252495    JAJ99229.1    GDIQ01214340    JAK37385.1    GDIQ01057548    JAN37189.1    GDIQ01185300    JAK66425.1    GDIP01093631    JAM10084.1    GDIP01075442    JAM28273.1    GDIP01073655    JAM30060.1    GDIP01149034    JAJ74368.1    GDIP01172643    JAJ50759.1    GDIP01236731    JAI86670.1    GDIP01200819    JAJ22583.1    GDIQ01042557    JAN52180.1    GDIP01078591    JAM25124.1    GDIQ01231734    JAK19991.1    GDIQ01173903    JAK77822.1    GDIQ01147980    JAL03746.1    GDIQ01248471    JAK03254.1    GDIQ01248472    JAK03253.1    GDIQ01121138    JAL30588.1    GDIP01172645    JAJ50757.1    GDIP01192235    JAJ31167.1   

Proteomes

UP000005204    UP000053240    UP000007151    UP000218220    UP000027135    UP000279307    + More
UP000078542    UP000075809    UP000235965    UP000007755    UP000078540    UP000005205    UP000002358    UP000215335    UP000078541    UP000030742    UP000002356    UP000242188    UP000009136    UP000245037    UP000053097    UP000078492    UP000007266    UP000028990    UP000005203    UP000053825    UP000050525    UP000000305    UP000275408    UP000076502    UP000006813    UP000028761    UP000273346    UP000005225    UP000189706    UP000085678   

PRIDE

H9IXX6   

Pfam

PF00856   SET        + More
PF10516   SHNi-TPR
PF01753   zf-MYND
PF13181   TPR_8
PF13405   EF-hand_6
PF13833   EF-hand_8

Interpro

IPR011990   TPR-like_helical_dom_sf        + More
IPR001214   SET_dom       
IPR002893   Znf_MYND       
IPR013026   TPR-contain_dom       
IPR019734   TPR_repeat       
IPR019544   Tetratricopeptide_SHNi-TPR_dom       
IPR018247   EF_Hand_1_Ca_BS       
IPR002048   EF_hand_dom       
IPR011992   EF-hand-dom_pair       

SUPFAM

SSF48452   SSF48452        + More
SSF47473   SSF47473       

Gene 3D

1.25.40.10    

ProteinModelPortal

H9IXX6   A0A194QUR8   A0A212EQL3   A0A1E1WDI6   A0A2W1BID7   A0A2H1VMN2   + More
A0A2A4J7W7   A0A067QU06   A0A3L8DH39   A0A151IEA8   A0A151XJ38   A0A2J7PMN5   A0A2J7PMQ7   F4WVD9   A0A195BUX1   A0A158NEI7   K7JBH8   A0A232ET23   E9ID67   A0A195FLN3   U4U1L1   A0A1B6BYA9   A0A0P4WGQ5   L8IZM9   W5PY61   A0A210Q399   E1BEP0   A0A2P8Y7Z3   A0A026WXY1   A0A195ENZ1   K7J9J4   D6WFW8   A0A091D5G5   A0A088AC23   A0A0L7R9P0   A0A151LY23   E9G026   A0A232EY53   A0A3M6TQE6   A0A310SDC0   A0A154P9Z0   A0A0V0GCE2   A0A0P6BIH0   A0A0N7ZJ18   G5BCU9   A0A0B7ADG3   A0A0P4YBJ9   A0A0P5ZZQ8   A0A096P2B0   A0A0P5B4S1   A0A0P5K9U1   A0A0P5PBD3   A0A0P6ENT6   A0A3L7GM00   A0A0P5LGX4   T1IUA2   A0A0P5QLL6   H0X7R5   A0A0P6EYF5   A0A0P5CC54   A0A0P5PVD4   A0A3Q0CKS4   A0A0P5EM83   A0A0N8E5F9   A0A0P6F7S5   A0A0N8B7W5   A0A0P5YDB2   A0A0P5QU98   A0A0P5KRM3   A0A0P5H401   A0A2R2MMS8   A0A0P5XVE6   A0A0P6EBK0   A0A0P5L0G2   A0A0P6EEP7   A0A0P5G1M6   A0A0P5IEY9   A0A0N8E6B5   A0A0P5KHK2   A0A0N8CVX7   A0A0P5X9D4   A0A0N8D324   A0A0P5FDH5   A0A0P5CBV0   A0A0P4Y3P2   A0A0P5BES0   A0A0P6FV93   A0A0N8D1A7   A0A0P5H7K7   A0A0P5LGY3   A0A0P5NL24   A0A0P5G774   A0A0P5GBQ9   A0A0P5QFY3   A0A0P5CPW3   A0A0P5AZF7  

KEGG

101746452    no KO assigned | (RefSeq) SET and MYND domain-containing protein 4

GO

GO:0008168   GO:0005515   GO:0008270   GO:0007017   GO:0005200   GO:0005525   GO:0048013   GO:0005003   GO:0005887   GO:0007169   GO:0016021  

Length:

239

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.04281

Exp number, first 60 AAs:

0.03451

Total prob of N-in:

0.42800

outside

1  -  239

 

 

Pi

20.370529

Theta

21.26818

Tajima's D

-0.287911

CLR

0

CSRT

0.284835758212089

Interpretation

Uncertain