Gene

KWMTBOMO00083

Annotation

PREDICTED:_CUB_and_sushi_domain-containing_protein_3_isoform_X3_[Bombyx_mori]

Location

Bomo_Chr1(-):2454165-2477286      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 3.522

CDS

ATGGATGTGCTGTACTTGATTGTCATCTTGCTGCAAGGCTATGTATCGGCAGCTTGTAACTTCCCGGGAGCGCCGGCCCATTGCCACGTGACGTTCTCCAACGACAGCCTGACAGAAGGCACCTCTGCCTGGTACGAATGTGATCGAGGCTTCGAACTGCTCGGTCCCTCTAGGAGGGTGTGTACGAGAGATGGAACGTGGATTCCTGAGGGAATACCGTTTTGCGGTGAGTACCATTATCGGGACTAA

Protein

MDVLYLIVILLQGYVSAACNFPGAPAHCHVTFSNDSLTEGTSAWYECDRGFELLGPSRRVCTRDGTWIPEGIPFCGEYHYRD

Uniprot

A0A2W1BC95   A0A0K2TB82   A0A0L7LTV7   A0A0K2TCA7   A0A194QUB1   T1J8K0   + More
A0A1J1IWT4   A0A1A9WC40   A0A2R7W4C8   A0A212EQQ5   J9JN65   A0A1B0FJN9   S4PX17   T1HTS7   A0A2H8TVZ1   Q16GJ5   A0A1B0GNI7   A0A2S2P4M5   A0A194PTK1   A0A1D2N5Z5   B3NUU6   A8JUX3   W8ATQ6   A0A226DFR8   A0A1Y3AQH9   M9PHT4   Q9VXX7   B3MR68   X2JBY1   W5JTC7   A0A336K7D3   A0A1V1FQ92   B4R546   A0A087UCJ8   B5DKN4   A0A3B0JY53   B4IJA4   A0A1B0CWM9   A0A1V1FIP8   A0A1V1FKG6   A0A0A1X034   A0A034V5X2   A0A0K8UH90   A0A182YMX3   A0A0K8VP00   A0A0K8TYL6   B4JMK8   A0A182PUA4   A0A1I8MVF0   A0A1I8MVF2   B4L5B1   A0A1I8MVE9   A0A1I8MVF6   A0A1W4VFH6   A0A1W4V384   A0A0M3QZP2   A0A0P5SU90   A0A182RVU2   B4N223   A0A0N8E054   A0A0P5RDU4   A0A0P5N0P7   A0A0P6EIU2   A0A0P6EL03   A0A0P5VR32   A0A0P6JZT4   A0A0P6CRR8   A0A0N8BJS6   A0A0P5SYX8   A0A0P5DCC3   A0A0P5WAI6   A0A0N8B3M7   A0A0P5ED97   A0A0P5I4J9   A0A1I8PA81   A0A0P5JT14   A0A0N8B976   A0A0P5B5Z1   A0A1I8PA87   A0A0P5JX41   A0A1I8PAF5   A0A0P5DSH4   A0A0P5J907   A0A0N8C393   A0A0P5T4G0   B4MAA8   A0A0N7ZZ34   A0A0N7ZNK9   D6WGL3   E0VZZ7   A0A084VNV4   A0A182LRQ6   A0A0P5TWM3  

Pubmed

28756777    26227816    26354079    22118469    23622113    17510324    + More
27289101    17994087    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    24495485    26109357    26109356    20920257    23761445    28410430    15632085    25830018    25348373    25244985    25315136    18362917    19820115    20566863    24438588   

EMBL

KZ150173    PZC72598.1    HACA01005719    CDW23080.1    JTDY01000097    KOB78882.1    + More
HACA01005720    CDW23081.1    KQ461108    KPJ09057.1    JH431955    CVRI01000061    CRL04020.1    KK854316    PTY14577.1    AGBW02013268    OWR43784.1    ABLF02040020    CCAG010020658    GAIX01005818    JAA86742.1    ACPB03003387    ACPB03003388    ACPB03003389    GFXV01006601    MBW18406.1    CH478269    EAT33365.1    AJVK01013467    AJVK01013468    GGMR01011237    MBY23856.1    KQ459593    KPI96741.1    LJIJ01000192    ODN00688.1    CH954180    EDV47044.1    AE014298    ABW09416.1    GAMC01014325    GAMC01014324    GAMC01014322    GAMC01014321    GAMC01014319    JAB92230.1    LNIX01000021    OXA43704.1    MUJZ01070503    OTF69435.1    AGB95404.1    BT004847    AAF48429.2    AAO45203.1    CH902622    EDV34273.2    AHN59735.1    ADMH02000140    ETN67627.1    UFQS01000005    UFQT01000005    SSW96910.1    SSX17297.1    FX985250    BAX07263.1    CM000366    EDX17947.1    KK119214    KFM75087.1    CH379063    EDY72084.1    OUUW01000003    SPP78689.1    CH480847    EDW51083.1    AJWK01032706    AJWK01032707    AJWK01032708    AJWK01032709    FX985248    BAX07261.1    FX985249    BAX07262.1    GBXI01010051    GBXI01007911    GBXI01004453    JAD04241.1    JAD06381.1    JAD09839.1    GAKP01020281    GAKP01020279    GAKP01020276    JAC38676.1    GDHF01026267    JAI26047.1    GDHF01011695    JAI40619.1    GDHF01032961    GDHF01015426    GDHF01010897    JAI19353.1    JAI36888.1    JAI41417.1    CH916371    EDV91951.1    CH933811    EDW06370.2    CP012528    ALC49763.1    GDIP01142538    JAL61176.1    CH963925    EDW78412.2    GDIQ01074836    JAN19901.1    GDIQ01102276    JAL49450.1    GDIQ01152919    JAK98806.1    GDIQ01265870    GDIQ01074837    JAN19900.1    GDIQ01074838    JAN19899.1    GDIP01096590    JAM07125.1    GDIQ01001529    JAN93208.1    GDIQ01088376    JAN06361.1    GDIQ01170851    JAK80874.1    GDIP01133473    JAL70241.1    GDIP01158171    JAJ65231.1    GDIP01090030    JAM13685.1    GDIQ01216043    JAK35682.1    GDIP01162172    JAJ61230.1    GDIQ01219448    JAK32277.1    GDIQ01199143    JAK52582.1    GDIQ01200451    JAK51274.1    GDIP01193573    JAJ29829.1    GDIQ01197796    JAK53929.1    GDIP01158172    JAJ65230.1    GDIQ01202948    JAK48777.1    GDIQ01119115    JAL32611.1    GDIP01133472    LRGB01000024    JAL70242.1    KZS21487.1    CH940655    EDW66167.1    GDIP01198465    JAJ24937.1    GDIP01227865    JAI95536.1    KQ971321    EFA01290.2    DS235854    EEB18953.1    ATLV01014929    ATLV01014930    KE524996    KFB39648.1    AXCM01003328    AXCM01003329    GDIP01120974    JAL82740.1   

Proteomes

UP000037510    UP000053240    UP000183832    UP000091820    UP000007151    UP000007819    + More
UP000092444    UP000015103    UP000008820    UP000092462    UP000053268    UP000094527    UP000008711    UP000000803    UP000198287    UP000007801    UP000000673    UP000000304    UP000054359    UP000001819    UP000268350    UP000001292    UP000092461    UP000076408    UP000001070    UP000075885    UP000095301    UP000009192    UP000192221    UP000092553    UP000075900    UP000007798    UP000095300    UP000076858    UP000008792    UP000007266    UP000009046    UP000030765    UP000075883   

Pfam

PF00084   Sushi        + More
PF00059   Lectin_C
PF00754   F5_F8_type_C

Interpro

IPR000436   Sushi_SCR_CCP_dom        + More
IPR035976   Sushi/SCR/CCP_sf       
IPR016187   CTDL_fold       
IPR001304   C-type_lectin-like       
IPR016186   C-type_lectin-like/link_sf       
IPR008979   Galactose-bd-like_sf       
IPR018378   C-type_lectin_CS       
IPR006585   FTP1       
IPR011009   Kinase-like_dom_sf       
IPR000687   RIO_kinase       
IPR018935   RIO_kinase_CS       
IPR000421   FA58C       

SUPFAM

SSF57535   SSF57535        + More
SSF56436   SSF56436       
SSF49785   SSF49785       
SSF56112   SSF56112       

Gene 3D

2.60.120.260     3.10.100.10    

CDD

cd00033  CCP

ProteinModelPortal

A0A2W1BC95   A0A0K2TB82   A0A0L7LTV7   A0A0K2TCA7   A0A194QUB1   T1J8K0   + More
A0A1J1IWT4   A0A1A9WC40   A0A2R7W4C8   A0A212EQQ5   J9JN65   A0A1B0FJN9   S4PX17   T1HTS7   A0A2H8TVZ1   Q16GJ5   A0A1B0GNI7   A0A2S2P4M5   A0A194PTK1   A0A1D2N5Z5   B3NUU6   A8JUX3   W8ATQ6   A0A226DFR8   A0A1Y3AQH9   M9PHT4   Q9VXX7   B3MR68   X2JBY1   W5JTC7   A0A336K7D3   A0A1V1FQ92   B4R546   A0A087UCJ8   B5DKN4   A0A3B0JY53   B4IJA4   A0A1B0CWM9   A0A1V1FIP8   A0A1V1FKG6   A0A0A1X034   A0A034V5X2   A0A0K8UH90   A0A182YMX3   A0A0K8VP00   A0A0K8TYL6   B4JMK8   A0A182PUA4   A0A1I8MVF0   A0A1I8MVF2   B4L5B1   A0A1I8MVE9   A0A1I8MVF6   A0A1W4VFH6   A0A1W4V384   A0A0M3QZP2   A0A0P5SU90   A0A182RVU2   B4N223   A0A0N8E054   A0A0P5RDU4   A0A0P5N0P7   A0A0P6EIU2   A0A0P6EL03   A0A0P5VR32   A0A0P6JZT4   A0A0P6CRR8   A0A0N8BJS6   A0A0P5SYX8   A0A0P5DCC3   A0A0P5WAI6   A0A0N8B3M7   A0A0P5ED97   A0A0P5I4J9   A0A1I8PA81   A0A0P5JT14   A0A0N8B976   A0A0P5B5Z1   A0A1I8PA87   A0A0P5JX41   A0A1I8PAF5   A0A0P5DSH4   A0A0P5J907   A0A0N8C393   A0A0P5T4G0   B4MAA8   A0A0N7ZZ34   A0A0N7ZNK9   D6WGL3   E0VZZ7   A0A084VNV4   A0A182LRQ6   A0A0P5TWM3  

PDB

2GSX     E-value=0.0100921,     Score=84

KEGG

101746314    no KO assigned | (RefSeq) CUB and sushi domain-containing protein 3

GO

GO:0016021   GO:0005524   GO:0004674   GO:0030246  

SignalP

Position:   1 - 17,         Likelihood:  0.997733

 

 

Length:

82

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

4.55763

Exp number, first 60 AAs:

4.55763

Total prob of N-in:

0.18275

outside

1  -  82

 

 

Pi

26.041071

Theta

25.939546

Tajima's D

-1.049705

CLR

0.002236

CSRT

0.129143542822859

Interpretation

Uncertain