Gene
KWMTBOMO00081
Pre Gene Modal
BGIBMGA002021
Annotation
PREDICTED:_CUB_and_sushi_domain-containing_protein_3_isoform_X2_[Bombyx_mori]
Location in the cell
PlasmaMembrane Reliability : 2.645
Sequence
CDS
ATGTTGTGTATGACATTGCCCTACAGTCTTACTTCTGTCACCAATCTTGTTAATATGTCAATTAATACATCGATATTTCCTTACACTTGGAAGACTGCTGTAGTTCGTCCTGTTCCTAAGAAACCTAATGCCATGACACTCAGTGACCTCCGACCCATCAGTATATTGCCCTGCTTGTCTAAAATTCTAGAGAAAGTAATATCTTCACAGCTGACGGACTATCTCGAGAAACATAACATATTGCCTGAGTATCAGTCCGGATTCCGGAGATCGCGTGGTACTGCAACTGCTCTCTTAGATGTGACGGATAATATCCTTGCTGCACGGGATCGGGGTATGTGTACGGTTCTGGTACTTCTGGACTTCTCTCGAGCATTTGACAGCTTGAACATTGACCTTCTTCTTGCCAAATTGAGTTTCTACGGCTTAAGTGCGGATACCATTCGTTGGTTCTCAAGTTATCTGACTGAACGATCGCAATTGGTGGAAATTCGTCGCGGTGAGGGTAATGTTCGATCCAACATGGCTAACGTCATTAATGGTGTACCACAGGGTTCGATCCTGGGCCCTTTACTATTTATCCTTTACAGCGCAGATATTGTTGGTCATATCAATCATTGTCAGTACCATATATATGCTGATGACATTCAACTGTACATCTCTTTTAAGATGTCCGAGTTTACAATGGCCATTGAGAAACTTACAGGGGACCTAAATAGAGTGGCGAATTGGTCGGAACAGAACTCACTCTTCTTAAATCCCAGCAAGACTAAATATATTGTGTTTGGAAATGAATCTCGATTGTCTAAGCTTCCATCACAACCTTTCAATGGGTTAAATATTCGAAATGACCCCATTGAGAGAGTATATGAGGTGCGTAACTTGGGCCTACTGATGGACGCAGCCTTAGTGGACGCAGGTAAAAGGGTATTCACCCCCTGCGCAACATCTAAGGCAGGTGTGGCTATAGGTGCAGTTTGTTGGTCGGAATTCAGGTTGGCTGTAGCATTTTCGAGTGACCCGGAGGGAGCCCGCCTATTCAGCTCCTCTCCGCTGACGGTTCGTATGCTGCCACACCCAGCGTCAGCTCCAGTTCTAAACGTGGCAGCCGGGAAGGCACCAATGCAAATTTCAACGGAAGACAGTGGAGTACCACAGCGTGCGTTGGACGGCAGCACATCGGCTACCTTCAGCGCTGAGACTTGCTCGCTGACTAAACAAGAGCGTGTGCCCTGGTGGTACGTTAACCTCCTCGAGCCGTATATGGTGCAACTCGTTCGTTTGGACTTCGGGAAGCCTTGTTGTGGAACGAACAAACCCGCTGTCATTGTCGTGCGCGTCGGTAATAACAGACCCGATTTAGGAACGAATCCGGTCTGCAACCGTTTCACTGGTTTTATCGAAGAGGGGCAGCCACTCTTTCTGCCTTGCAACCCCCCGATGCCCGGCGCATTCGTCAGCGTTCACTTAGAGGGGTCGTCTCCCAGCCAACTGTCGATCTGCGAGGCTTTCGTTTATACCGACCAAGCTTTGCCAATTGAGAGATGCCCTCAGTTCAGAGATCAGCCCCCAGGGAGCACGGCGACTTATAACGGAAAATGCTATATTTTCTACGATCGGCAGCCGGCTACCTTCAGGGACGCGCTGGGCTTCTGCCGCTCACGAGGAGGAACCCTAGTGGACGAGAGCAACCCCGCTCTGCAAGGGTTCATCAGCTGGGAGCTATGGAGACGCCATCGAAGCGACAGCAGCAGTCAGTACTGGATGGGTGCCGTCCGCGACCCCCAAGACCCCAACAACTGGAAGTGGGTGAACGGGAATGACGTCACGGTATCGTTCTGGAATGCTCCGGGGGGCGGAGAGGGTTGTGCCAGATTCGACGGAAGCAAGGGCTGGTTGTGGGCCGACTCTGACTGTCAAGCGAGATTGAACTACATTTGTCAGCACCAGCCTAAAACGTGCGGTAGACCGGAGCAGCCTCCGAACTCGACAATGACAGCTGACAGTTACGAAGTCGGATCTTCCGTGGAGTACTCCTGCGATGAAGGTCATCTACTAGTTGGTGCCACGGTCAGGACATGTCTGGACACAGGGTTCTATGATGAATTCCCACCAGTGTGTAAGAGAATCGAGTGCGGTTACCCGGCGGAGATCCACCACGGCTCCTACGCGCTGATGAACGGATCCGTTTCGTATTTATCACACGTCCAGTACTCCTGTGAAGCTGGGTACGAGATGGCCGGACGCTCGCGTCTGGTCTGTGACATCGACGAGAGATGGAACGGACCTCCGCCTCGATGCGACGTGGTGCAGTGCGAAGATCCTCCACAAATATCGAACGGTCAAGTGTCGATGTCGCACAACGCGTCTGTATTCGGGTCGGTGGCTGAATACGAATGCTCTGAAGGCTTCGTTCTGCAAGGGCCAAGGAGGATCGCCTGTCTAGCTTCCGGACTGTGGGACAAATCTCCTCCTCTATGTCAGCCGGAAGAACGCCCGACGACGACCACGACAACGACCACGGCTCCTCCACCTCCACCTCCCAGTACGATCTTTACCCCTCCCCGCCTGCCCCCTACAACACCTCGCCTAGTCCTCCCCTCACGTCGCACCACGATCCGTCCTCTATCTTCTCCCACGCCGTTCATCACTCAAGAACCACGTCGCCCTAAGCCCAAGAGTACTACAGAGCGACCCACGACTAAGGGATACGAACGATTTCCTGAGAAGAAAGTCACAGTCCCAGACAGTCAGGACTCCGCAACGAGTCACGTCCCTCACATCATTGTGGCGAGTCACCCTAGAGAAAATCAGATCATAGGTAGCGGTAACAATATCCGCGCCGAACAGAGTCCTGGGGTCAATGTCCCACAGCCGGTAGATGGTGAGCGCCGCGAATCCACCGGTCCTCGGCTGAACATCGGGGCTGTGGTCGCTCTGGGCGCCTTCGGTGGGCTCGTCTTCTTGATCGCCATCATCACGACCATCGTCATCCTCGTTAGAAGGTAA
Protein
MLCMTLPYSLTSVTNLVNMSINTSIFPYTWKTAVVRPVPKKPNAMTLSDLRPISILPCLSKILEKVISSQLTDYLEKHNILPEYQSGFRRSRGTATALLDVTDNILAARDRGMCTVLVLLDFSRAFDSLNIDLLLAKLSFYGLSADTIRWFSSYLTERSQLVEIRRGEGNVRSNMANVINGVPQGSILGPLLFILYSADIVGHINHCQYHIYADDIQLYISFKMSEFTMAIEKLTGDLNRVANWSEQNSLFLNPSKTKYIVFGNESRLSKLPSQPFNGLNIRNDPIERVYEVRNLGLLMDAALVDAGKRVFTPCATSKAGVAIGAVCWSEFRLAVAFSSDPEGARLFSSSPLTVRMLPHPASAPVLNVAAGKAPMQISTEDSGVPQRALDGSTSATFSAETCSLTKQERVPWWYVNLLEPYMVQLVRLDFGKPCCGTNKPAVIVVRVGNNRPDLGTNPVCNRFTGFIEEGQPLFLPCNPPMPGAFVSVHLEGSSPSQLSICEAFVYTDQALPIERCPQFRDQPPGSTATYNGKCYIFYDRQPATFRDALGFCRSRGGTLVDESNPALQGFISWELWRRHRSDSSSQYWMGAVRDPQDPNNWKWVNGNDVTVSFWNAPGGGEGCARFDGSKGWLWADSDCQARLNYICQHQPKTCGRPEQPPNSTMTADSYEVGSSVEYSCDEGHLLVGATVRTCLDTGFYDEFPPVCKRIECGYPAEIHHGSYALMNGSVSYLSHVQYSCEAGYEMAGRSRLVCDIDERWNGPPPRCDVVQCEDPPQISNGQVSMSHNASVFGSVAEYECSEGFVLQGPRRIACLASGLWDKSPPLCQPEERPTTTTTTTTAPPPPPPSTIFTPPRLPPTTPRLVLPSRRTTIRPLSSPTPFITQEPRRPKPKSTTERPTTKGYERFPEKKVTVPDSQDSATSHVPHIIVASHPRENQIIGSGNNIRAEQSPGVNVPQPVDGERRESTGPRLNIGAVVALGAFGGLVFLIAIITTIVILVRR
Summary
Uniprot
ProteinModelPortal
PDB
2Q7Z
E-value=3.80288e-23,
Score=272
Ontologies
GO
Topology
Length:
1002
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
23.31058
Exp number, first 60 AAs:
0.13089
Total prob of N-in:
0.00829
outside
1 - 977
TMhelix
978 - 1000
inside
1001 - 1002
Population Genetic Test Statistics
Pi
2.119276
Theta
24.904027
Tajima's D
-0.785958
CLR
0.002725
CSRT
0.178991050447478
Interpretation
Uncertain
