Gene

KWMTBOMO00068

Pre Gene Modal

BGIBMGA002101

Annotation

biogenesis_of_lysosome-related_organelles_complex_1_subunit_2_[Bombyx_mori]

Location

Bomo_Chr1(+):2052197-2058511      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.237

CDS

ATGAGTCTCAGCACAGAAGACATAGAAAAATGGACGAGAGACGGAAGAAACAAAGAGCTTCAAATGTCACCCAGCTGTTCGAGTTTCGAAGTCCTGGATCCACATGATCCTGTGATCAGTCGGTTAGCCACACAGCTCTTTAAAAAAACAACTGACTACCTTCAGGCTGAAATGGTTGCTGGACAGGAACACTACATGCTGCTTGAGGAGATCAACAGACTCGCGATCACCAAGTACGCAGATCTAAGGAGCCTAGCCGCGAACCTGAACAAGACCCTTAATGAATACAACGAGATGTATGCCCAGCAGATCCAACCCCTACTCCAGCAGATAGATCAAATCGAAGTCCAGGTATCTAAATTCGAAGTTAACGCTTACCGCCTCGACAGCTATACGAAGCAATTGAAGGCTCGTTTTAAGGAGCTTGAAGAGAAGTAA

Protein

MSLSTEDIEKWTRDGRNKELQMSPSCSSFEVLDPHDPVISRLATQLFKKTTDYLQAEMVAGQEHYMLLEEINRLAITKYADLRSLAANLNKTLNEYNEMYAQQIQPLLQQIDQIEVQVSKFEVNAYRLDSYTKQLKARFKELEEK

Uniprot

D1N0G3   A0A212F9N4   A0A1E1WSQ6   A0A2Z6DSH9   A0A194QFE0   A0A194QPG8   + More
S4PM22   A0A194PTU4   A0A2A4JC74   A0A194QUC0   A0A2W1BSI9   A0A2H1WJH4   A0A2P8Y0E2   A0A2J7PEX5   A0A1Y1KL17   A0A1B6JDT8   D6WJT3   J3JWC4   A0A1B6LPS9   A0A067QY83   N6U3X1   A0A0A9YCA1   A0A1B6DGL3   R4G3A4   A0A0P4WIL7   A0A0P4VRN7   A0A1L8DTC6   A0A1L8DTN0   A0A1B0CG40   A0A0V0G847   A0A069DPB4   A0A023F8U5   A0A224XN89   A0A2P2I103   A0A0C9R9W8   A0A0T6AVE7   A0A2R7W716   A0A2H8TU06   A0A2S2PF61   C4WSR8   A0A1D2NMS8   A0A195F6I0   E2BTJ6   A0A151JEX8   A0A2S2Q5Y1   E1ZUX8   A0A0K8VSY3   A0A034WM74   A0A195AYX7   A0A158NYF2   F4WT54   A0A151WWZ5   A0A154PCJ7   A0A0J7JX66   A0A026W4V2   E9JD65   K7IQL1   A0A232EY06   A0A0L7RE02   A0A195D0L7   A0A088AN43   A0A310SN33   A0A2A3EFW2   A0A0A1XKD1   W8C9T9   A0A2M4C2N6   A0A0M8ZYB4   A0A293MVJ5   A0A1I8PXY9   A0A0K2U2F4   W5JS11   A0A1I8MD51   A0A2M3ZJS1   A0A182XD22   A0A182PFH0   A0A1A9W4P9   A0A1A9YMK8   A0A1B0AYZ8   A0A182KW26   Q7Q7E3   A0A1B0FAA9   A0A1A9UXR7   A0A1A9ZWL4   A0A182HMF1   A0A2M4AXA2   A0A182UNC5   A0A182MFR5   B3M5N5   A0A0P6C256   A0A182UFM1   A0A023GBW5   A0A182WAL9   A0A182YNM2   A0A182K6Y4   A0A182N7V9   A0A1Z5L1V5   B4N439   A0A084WEY8  

Pubmed

19121390    22118469    26354079    23622113    28756777    29403074    + More
28004739    18362917    19820115    22516182    24845553    23537049    25401762    26823975    27129103    26334808    25474469    27289101    20798317    25348373    21347285    21719571    24508170    30249741    21282665    20075255    28648823    25830018    24495485    20920257    23761445    25315136    20966253    12364791    14747013    17210077    17994087    25244985    28528879    24438588   

EMBL

BABH01015755    BABH01015756    AB539593    BAI63077.1    AGBW02009564    OWR50444.1    + More
GDQN01001396    GDQN01001188    JAT89658.1    JAT89866.1    LC378373    BBD74474.1    KQ459252    KPJ02186.1    KQ461185    KPJ07428.1    GAIX01000326    JAA92234.1    KQ459593    KPI96737.1    NWSH01002157    PCG69040.1    KQ461108    KPJ09062.1    KZ149952    PZC76595.1    ODYU01009055    SOQ53188.1    PYGN01001086    PSN37732.1    NEVH01026087    PNF14875.1    GEZM01083153    JAV61161.1    GECU01010255    JAS97451.1    KQ971343    EFA04749.2    BT127542    AEE62504.1    GEBQ01014272    JAT25705.1    KK853114    KDR11180.1    APGK01040820    KB740984    KB631899    ENN76290.1    ERL86936.1    GBHO01013805    GBRD01016607    GDHC01006465    JAG29799.1    JAG49219.1    JAQ12164.1    GEDC01012467    JAS24831.1    ACPB03018165    GAHY01001856    JAA75654.1    GDRN01044119    JAI66941.1    GDKW01002046    JAI54549.1    GFDF01004362    JAV09722.1    GFDF01004344    JAV09740.1    AJWK01010713    GECL01002051    JAP04073.1    GBGD01003363    JAC85526.1    GBBI01000856    JAC17856.1    GFTR01002460    JAW13966.1    IACF01002045    LAB67715.1    GBYB01009742    JAG79509.1    LJIG01022774    KRT78782.1    KK854392    PTY15399.1    GFXV01005938    MBW17743.1    GGMR01015458    MBY28077.1    ABLF02032472    AK340308    BAH70938.1    LJIJ01000006    ODN06395.1    KQ981768    KYN35991.1    GL450410    EFN81024.1    KQ979032    KYN24334.1    GGMS01003807    MBY73010.1    GL434326    EFN75013.1    GDHF01010317    JAI41997.1    GAKP01004064    JAC54888.1    KQ976701    KYM77240.1    ADTU01003783    GL888331    EGI62667.1    KQ982684    KYQ52368.1    KQ434864    KZC09134.1    LBMM01023741    KMQ82672.1    KK107419    QOIP01000003    EZA51095.1    RLU24692.1    GL771866    EFZ09218.1    NNAY01001731    OXU23098.1    KQ414613    KOC69040.1    KQ977004    KYN06460.1    KQ759851    OAD62542.1    KZ288269    PBC30046.1    GBXI01003274    JAD11018.1    GAMC01001864    JAC04692.1    GGFJ01010446    MBW59587.1    KQ435824    KOX72083.1    GFWV01019788    MAA44516.1    HACA01015113    CDW32474.1    ADMH02000528    ETN66088.1    GGFM01008033    MBW28784.1    JXJN01006061    AAAB01008960    EAA11293.3    CCAG010015091    APCN01004428    GGFK01012093    MBW45414.1    AXCM01000178    CH902618    EDV40669.1    GDIP01007985    JAM95730.1    GBBM01004069    JAC31349.1    GFJQ02005802    JAW01168.1    CH964095    EDW78913.1    ATLV01023266    KE525341    KFB48782.1   

Proteomes

UP000005204    UP000007151    UP000053268    UP000053240    UP000218220    UP000245037    + More
UP000235965    UP000007266    UP000027135    UP000019118    UP000030742    UP000015103    UP000092461    UP000007819    UP000094527    UP000078541    UP000008237    UP000078492    UP000000311    UP000078540    UP000005205    UP000007755    UP000075809    UP000076502    UP000036403    UP000053097    UP000279307    UP000002358    UP000215335    UP000053825    UP000078542    UP000005203    UP000242457    UP000053105    UP000095300    UP000000673    UP000095301    UP000076407    UP000075885    UP000091820    UP000092443    UP000092460    UP000075882    UP000007062    UP000092444    UP000078200    UP000092445    UP000075840    UP000075903    UP000075883    UP000007801    UP000075902    UP000075920    UP000076408    UP000075881    UP000075884    UP000007798    UP000030765   

PRIDE

D1N0G3   

Pfam

PF10046   BLOC1_2

Interpro

IPR019269   BLOC1_su2        + More
IPR027267   AH/BAR_dom_sf       

Gene 3D

1.20.1270.60    

ProteinModelPortal

D1N0G3   A0A212F9N4   A0A1E1WSQ6   A0A2Z6DSH9   A0A194QFE0   A0A194QPG8   + More
S4PM22   A0A194PTU4   A0A2A4JC74   A0A194QUC0   A0A2W1BSI9   A0A2H1WJH4   A0A2P8Y0E2   A0A2J7PEX5   A0A1Y1KL17   A0A1B6JDT8   D6WJT3   J3JWC4   A0A1B6LPS9   A0A067QY83   N6U3X1   A0A0A9YCA1   A0A1B6DGL3   R4G3A4   A0A0P4WIL7   A0A0P4VRN7   A0A1L8DTC6   A0A1L8DTN0   A0A1B0CG40   A0A0V0G847   A0A069DPB4   A0A023F8U5   A0A224XN89   A0A2P2I103   A0A0C9R9W8   A0A0T6AVE7   A0A2R7W716   A0A2H8TU06   A0A2S2PF61   C4WSR8   A0A1D2NMS8   A0A195F6I0   E2BTJ6   A0A151JEX8   A0A2S2Q5Y1   E1ZUX8   A0A0K8VSY3   A0A034WM74   A0A195AYX7   A0A158NYF2   F4WT54   A0A151WWZ5   A0A154PCJ7   A0A0J7JX66   A0A026W4V2   E9JD65   K7IQL1   A0A232EY06   A0A0L7RE02   A0A195D0L7   A0A088AN43   A0A310SN33   A0A2A3EFW2   A0A0A1XKD1   W8C9T9   A0A2M4C2N6   A0A0M8ZYB4   A0A293MVJ5   A0A1I8PXY9   A0A0K2U2F4   W5JS11   A0A1I8MD51   A0A2M3ZJS1   A0A182XD22   A0A182PFH0   A0A1A9W4P9   A0A1A9YMK8   A0A1B0AYZ8   A0A182KW26   Q7Q7E3   A0A1B0FAA9   A0A1A9UXR7   A0A1A9ZWL4   A0A182HMF1   A0A2M4AXA2   A0A182UNC5   A0A182MFR5   B3M5N5   A0A0P6C256   A0A182UFM1   A0A023GBW5   A0A182WAL9   A0A182YNM2   A0A182K6Y4   A0A182N7V9   A0A1Z5L1V5   B4N439   A0A084WEY8  

KEGG

100328579    K16750 biogenesis of lysosome-related organelles complex 1 subunit 2 | (RefSeq) BLOS2, BmBLOS2; biog

GO

GO:0043015   GO:0031083   GO:0032418   GO:0099078   GO:0016197   GO:0000930   GO:0042803  

Length:

145

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.14327

outside

1  -  145

 

 

Pi

15.539563

Theta

17.358693

Tajima's D

-0.496206

CLR

0.086588

CSRT

0.24368781560922

Interpretation

Uncertain