Gene

KWMTBOMO00067  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA002024

Annotation

PREDICTED:_plexin_domain-containing_protein_2_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr1(-):2001182-2048656      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.877 PlasmaMembrane   Reliability : 1.507

CDS

ATGGATAAAGCTATTGTGAATGTGAGATTTAAAGCAGCAGTGACTATTATTCTATTAGTATTCTTGGTCAACCGAGGCTCTCAAGCAGCTTGGCGCGAAGAATTCTTCACTCCGAGCTGGTTCTCTAAGAGTGCAACGACCGCAGCAGTGAGTCTCGATCGTCACCGTCGCGATGTTGCATCTTCGGCGAAGCCCGCGATTCCGGTCACGACCTCTGCAGTTCTTGTTACAAAGATGGACAAGATCACCAAGAATGACACCGAAATTGCCAATGTTACTGATGCTCTTCGGGCGGACGGCAACGTATCCGTGACTCAGATTCCACTTCTGGGCGTGAACGGCTCCGGCATCCTCAAGGTCACCCCGACCGAGAACACGCACAAAGTCAGCGAACCTATCGACCCTGACCCTGATTACGATATGCGAGACATTTCCAACTTTACCCCGGATAAAATAAAAGCGGAACACAACATAACCGATTTAACAATTGACAATCACGAGTTCTACAACAGCTCCTTCATCGGCAACGCTATGTTTTTCAACGAGTACTGGGCAAATATCACCACGAAGGGAGCTAATGCCCATCGCTTGCTCAGCAATTCCCACAGAAGGGCAACCATGATTCAACTGTCGTTCACATTCCCGTTTTACGGGTATCCAATCAAAGATATAACCGTGGCCACGGGAGGGTTCATTCACACCGGCGAGCACGTTCACAACTGGTTGGCCGCTACGCAATACATTGCTCCGTTGATGGCTAACTTCGACACTTCGCTCACCAACGACAGCTATGTTAAGCTTAAAGACGATGGCGACCGGTTCACGGTGCTCTGGGAGAACGTACCCCTCCAGGAGGACCTGACGAAGAAGTTCACGTTCGCGGCGACCCTATACAAGAACGGCGACATCGTGTTCGCCTACAAGAACATACCGATCGACGTCAACACAATAAAGAACACGAGCCATCCCGTCAAAGTGGGCATCAGCGACGCTTACATGACCGACGCGTTCTACTACCAGATCCCGAAGCTGACGATATACCACCGCGTCTCGTTCAAGAACCACAACATCAAGAACGGCACCGTCCTGTGGCTGACCGCGCTGCCGACCTGCATCCAGTTCAGCACGTGCGACGAGTGTCTCAACCACGACACCACGTTTAACTGTACGTGGTGCAGTCGTTTGCAGAAGTGCTCGAGCGGTACAGACAGGAACAAACAAAGCTGGGAGATCAAACAATGCAACGCGTCTGCACTGACGAACGCGACGACCTGCCCGGCGACGCAGTCCGACACTGCCAACAACACTGTCAACGCCAGCACCACAAATAAACCTGACAATCAATCAACGACCGCAGCCGATGCCGTTGATCACGCAAAATCTCGCGTTCAGATCTCAGTACCGGTTCAGAGGAGGCCGATAGGGGGCGCCGTGTTTGGGTTCGTGGTGGTCGCTCTGATATGTTCGCTTGCACTTTGGGTGGTGTACGCGTTCAAGAATCCTCACACTCGCAGCGGACAATTCCTTATTAAATACCGACCGTCGCAGTGGAGTTGGCGTCGCGGTGAAGCGCGCTACACGGCCGCCACCATCCACATGTAA

Protein

MDKAIVNVRFKAAVTIILLVFLVNRGSQAAWREEFFTPSWFSKSATTAAVSLDRHRRDVASSAKPAIPVTTSAVLVTKMDKITKNDTEIANVTDALRADGNVSVTQIPLLGVNGSGILKVTPTENTHKVSEPIDPDPDYDMRDISNFTPDKIKAEHNITDLTIDNHEFYNSSFIGNAMFFNEYWANITTKGANAHRLLSNSHRRATMIQLSFTFPFYGYPIKDITVATGGFIHTGEHVHNWLAATQYIAPLMANFDTSLTNDSYVKLKDDGDRFTVLWENVPLQEDLTKKFTFAATLYKNGDIVFAYKNIPIDVNTIKNTSHPVKVGISDAYMTDAFYYQIPKLTIYHRVSFKNHNIKNGTVLWLTALPTCIQFSTCDECLNHDTTFNCTWCSRLQKCSSGTDRNKQSWEIKQCNASALTNATTCPATQSDTANNTVNASTTNKPDNQSTTAADAVDHAKSRVQISVPVQRRPIGGAVFGFVVVALICSLALWVVYAFKNPHTRSGQFLIKYRPSQWSWRRGEARYTAATIHM

Uniprot

H9IXP1   A0A2W1BSG9   A0A194Q4R2   A0A212F9M9   A0A2H1V9V7   A0A1E1WPS9   + More
A0A1L8EI55   A0A1L8EIB8   T1PLL2   A0A1A9VWY2   V5GJC2   A0A1I8MIH9   A0A1L8ECZ1   A0A1A9WT35   A0A034W0M1   A0A1I8PSQ6   W8BGN7   W8B4P7   A0A034VZ04   W8BS65   A0A1I8PSP2   A0A0M9A3B7   A0A0A1WNR2   A0A1I8PSL2   A0A034VVH0   B3MY22   W8B4P4   A0A2J7RRB2   A0A084W174   A0A034VY05   A0A067RE49   A0A088AIJ5   A0A1A9Z3V8   A0A2A3EJZ7   A0A1L8E3E4   A0A1L8E407   A0A1L8E3G3   A0A1L8E3E7   D6WNK8   A0A232F748   A0A1L8E3F3   A0A026WTW7   A0A0L7RD37   A0A1A9YUD4   B0WBH8   U5ERP6   A0A1S4FS14   Q16R67   A0A1L8E3F4   A0A3L8DA20   B4MJB0   A0A1B6DVW1   A0A1B6C4U2   E1ZZS4   A0A151JSS7   F4W7D1   A0A224XK12   B4R7J2   B4PXI1   A0A182Q8E6   B4IDP8   A0A151X8T1   A0A182YPR5   A0A195DSL0   A0A0Q9WNL8   A0A195ATE4   B3NW39   A0A146LRN5   A0A0K8S702   A0A158NPW0   A0A0A9Z303   A0A182NQ96   A0A1Q3F587   A0A1W4XPM5   A0A0R1EHW5   E2BAU8   A0A1B6G7J8   T1IEN7   Q9W2V9   K7J6U5   A0A0Q5T382   A0A1Q3F5A6   B4MEE4   A0A1Q3F5L9   A0A182RJV5   A0A336ML95   A0A1W6EW90   A0A1Y1MAB1   A0A0Q9W8W0   A0A2R7WXN0   A0A2M4BK79   A0A2M4BHV2   A0A0P5P5F3   A0A0P5H8T2   A0A0N8C6Z0   A0A0P5RRD6   A0A0P5P9M1   A0A0P5HZM8   A0A0P5WB76  

Pubmed

19121390    28756777    26354079    22118469    25315136    25348373    + More
24495485    25830018    17994087    24438588    24845553    18362917    19820115    28648823    24508170    17510324    30249741    20798317    21719571    17550304    25244985    26823975    21347285    25401762    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    20075255    28004739   

EMBL

BABH01015750    BABH01015751    KZ149952    PZC76594.1    KQ459463    KPJ00532.1    + More
AGBW02009564    OWR50442.1    ODYU01001419    SOQ37576.1    GDQN01002213    JAT88841.1    GFDG01000465    JAV18334.1    GFDG01000466    JAV18333.1    KA649604    AFP64233.1    GALX01004277    JAB64189.1    GFDG01002285    JAV16514.1    GAKP01011639    JAC47313.1    GAMC01010427    JAB96128.1    GAMC01010428    GAMC01010425    JAB96130.1    GAKP01011640    JAC47312.1    GAMC01010429    GAMC01010426    GAMC01010424    JAB96126.1    KQ435774    KOX75093.1    GBXI01013898    GBXI01013603    JAD00394.1    JAD00689.1    GAKP01011641    JAC47311.1    CH902630    EDV38637.1    GAMC01010430    JAB96125.1    NEVH01000611    PNF43355.1    ATLV01019240    KE525266    KFB43968.1    GAKP01011638    JAC47314.1    KK852521    KDR22116.1    KZ288222    PBC32047.1    GFDF01000824    JAV13260.1    GFDF01000822    JAV13262.1    GFDF01000823    JAV13261.1    GFDF01000821    JAV13263.1    KQ971342    EFA03767.1    NNAY01000836    OXU26263.1    GFDF01000826    JAV13258.1    KK107105    EZA59505.1    KQ414614    KOC68877.1    CCAG010019883    DS231879    EDS42417.1    GANO01003644    JAB56227.1    CH477723    EAT36889.1    GFDF01000814    JAV13270.1    QOIP01000011    RLU16758.1    CH963738    EDW72199.1    GEDC01007470    GEDC01003112    JAS29828.1    JAS34186.1    GEDC01028791    JAS08507.1    GL435522    EFN73297.1    KQ982014    KYN30618.1    GL887844    EGI69804.1    GFTR01007636    JAW08790.1    CM000366    EDX17551.1    CM000162    EDX02932.1    AXCN02001888    CH480830    EDW45706.1    KQ982409    KYQ56739.1    KQ980487    KYN15905.1    KRF97514.1    KQ976745    KYM75493.1    CH954180    EDV46172.1    GDHC01015480    GDHC01009292    JAQ03149.1    JAQ09337.1    GBRD01017333    GBRD01017332    JAG48495.1    ADTU01022770    ADTU01022771    ADTU01022772    ADTU01022773    ADTU01022774    GBHO01007424    JAG36180.1    GFDL01012320    JAV22725.1    KRK07025.1    GL446860    EFN87176.1    GECZ01022162    GECZ01021903    GECZ01014336    GECZ01011398    JAS47607.1    JAS47866.1    JAS55433.1    JAS58371.1    ACPB03011507    AE014298    AY069641    BT083419    AAF46578.1    AAL39786.1    ACQ91093.1    ALI51145.1    ALI51146.1    AAZX01001299    AAZX01011167    AAZX01017108    KQS29858.1    GFDL01012294    JAV22751.1    CH940664    EDW62919.1    GFDL01012181    JAV22864.1    UFQS01001240    UFQT01001240    SSX09890.1    SSX29613.1    KY563582    ARK19991.1    GEZM01036341    JAV82769.1    KRF80854.1    KK855893    PTY24286.1    GGFJ01004291    MBW53432.1    GGFJ01003499    MBW52640.1    GDIQ01135128    JAL16598.1    GDIQ01231249    JAK20476.1    GDIQ01108739    JAL42987.1    GDIQ01097089    JAL54637.1    GDIQ01137840    JAL13886.1    GDIQ01243445    JAK08280.1    GDIP01088556    JAM15159.1   

Proteomes

UP000005204    UP000053268    UP000007151    UP000078200    UP000095301    UP000091820    + More
UP000095300    UP000053105    UP000007801    UP000235965    UP000030765    UP000027135    UP000005203    UP000092445    UP000242457    UP000007266    UP000215335    UP000053097    UP000053825    UP000092444    UP000002320    UP000008820    UP000279307    UP000007798    UP000000311    UP000078541    UP000007755    UP000000304    UP000002282    UP000075886    UP000001292    UP000075809    UP000076408    UP000078492    UP000078540    UP000008711    UP000005205    UP000075884    UP000192223    UP000008237    UP000015103    UP000000803    UP000002358    UP000008792    UP000075900   

PRIDE

H9IXP1   

Pfam

PF01437   PSI        + More
PF03165   MH1

Interpro

IPR002165   Plexin_repeat        + More
IPR016201   PSI       
IPR031152   PLXDC       
IPR003619   MAD_homology1_Dwarfin-type       
IPR036578   SMAD_MH1_sf       
IPR013019   MAD_homology_MH1       

SUPFAM

SSF56366   SSF56366       

Gene 3D

3.90.520.10    

ProteinModelPortal

H9IXP1   A0A2W1BSG9   A0A194Q4R2   A0A212F9M9   A0A2H1V9V7   A0A1E1WPS9   + More
A0A1L8EI55   A0A1L8EIB8   T1PLL2   A0A1A9VWY2   V5GJC2   A0A1I8MIH9   A0A1L8ECZ1   A0A1A9WT35   A0A034W0M1   A0A1I8PSQ6   W8BGN7   W8B4P7   A0A034VZ04   W8BS65   A0A1I8PSP2   A0A0M9A3B7   A0A0A1WNR2   A0A1I8PSL2   A0A034VVH0   B3MY22   W8B4P4   A0A2J7RRB2   A0A084W174   A0A034VY05   A0A067RE49   A0A088AIJ5   A0A1A9Z3V8   A0A2A3EJZ7   A0A1L8E3E4   A0A1L8E407   A0A1L8E3G3   A0A1L8E3E7   D6WNK8   A0A232F748   A0A1L8E3F3   A0A026WTW7   A0A0L7RD37   A0A1A9YUD4   B0WBH8   U5ERP6   A0A1S4FS14   Q16R67   A0A1L8E3F4   A0A3L8DA20   B4MJB0   A0A1B6DVW1   A0A1B6C4U2   E1ZZS4   A0A151JSS7   F4W7D1   A0A224XK12   B4R7J2   B4PXI1   A0A182Q8E6   B4IDP8   A0A151X8T1   A0A182YPR5   A0A195DSL0   A0A0Q9WNL8   A0A195ATE4   B3NW39   A0A146LRN5   A0A0K8S702   A0A158NPW0   A0A0A9Z303   A0A182NQ96   A0A1Q3F587   A0A1W4XPM5   A0A0R1EHW5   E2BAU8   A0A1B6G7J8   T1IEN7   Q9W2V9   K7J6U5   A0A0Q5T382   A0A1Q3F5A6   B4MEE4   A0A1Q3F5L9   A0A182RJV5   A0A336ML95   A0A1W6EW90   A0A1Y1MAB1   A0A0Q9W8W0   A0A2R7WXN0   A0A2M4BK79   A0A2M4BHV2   A0A0P5P5F3   A0A0P5H8T2   A0A0N8C6Z0   A0A0P5RRD6   A0A0P5P9M1   A0A0P5HZM8   A0A0P5WB76  

PDB

3AL9     E-value=0.027917,     Score=89

KEGG

101745405    no KO assigned | (RefSeq) plexin domain-containing protein 2

GO

GO:0016021   GO:0016020   GO:0005634   GO:0007179   GO:0003700   GO:0005667   GO:0005515   GO:0016791   GO:0006470   GO:0005524   GO:0048013   GO:0005003   GO:0005887   GO:0007169  

PANTHER

PTHR13055  

Subcellular location

Nucleus  

SignalP

Position:   1 - 29,         Likelihood:  0.769742

 

 

Length:

533

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

36.65779

Exp number, first 60 AAs:

13.88716

Total prob of N-in:

0.65402

POSSIBLE N-term signal

sequence

outside

1  -  473

TMhelix

474  -  496

inside

497  -  533

 

 

Pi

18.638588

Theta

18.696369

Tajima's D

-1.248196

CLR

0.065026

CSRT

0.0919454027298635

Interpretation

Uncertain