Gene

KWMTBOMO00060  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA002029

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_peroxisomal_membrane_protein_PEX16_[Bombyx_mori]

Location

Bomo_Chr1(-):1902689-1903950      View in EpiBrowser

Full name

Peroxisomal membrane protein PEX16      

Location in the cell

PlasmaMembrane   Reliability : 2.06

CDS

ATGAGTAGCAAATTGTCGTTGCAAGAAGTGTACACTGCGTACAAGCGATGGGTGATCAGCAATCCGAGCGTGGTGACAGACGTCGAGACCGTTGCTACATGGACGTCGTATTTCGTGGCCGGTAAAATAAACAAATCCCCAATTATATCTGAAATGATATACTGCATGTCAAAGCTGTTATCATTGTATAATGATAGGCTTATTCGAGACGCTTACGGTGCCGAAACTTCATCTTATGGACTTCGTGAACAGATTAAAATATGGCTCACTATCATTCACTATAGTGAAGTGTTTGTAGAACTCATTGCCAAAGACAGATGGGGACAACGAGGCAAGTGGACCGTTGCAGCTTTGTTGCAGCTCTTCAAAGCATCGTCCGGATTAATTCTTCTGTATCGATTCAAAGAACTTCCCATATCACACCCCCCTGTTGCTTTCTTACAAAGAAAGAAGTATACTGAAGGCCGAGATGTTGAAGAGCATGAGAATTCATTTTTTAAGCTTCGCAGGTCTGGCCGTGTTATGAGACGTGTTGATGGAGCACCTCCAATTGCTTTTCGAGATTGGACGCCAGTGAAAATAAAAGATGATAGACCTGTGCCTGGCATTGAGGTTAAGGACTTATTGTATGCTGAGTCATTACATGTATTGAAGCCATTACTTCATCTTGCTGCAATGAGGTTCTTTGGAAATAAAGCCTGGAAGCAGTGGTTTGTGGCTCTCAGTATTGATATTGCCAGTCTCAAAGTATACAATAGGTATATGAAAGAGTTATCATATGAACAAAGACTGGAAATAAGTCGAAGAAAATTAGGCTTAGTCCTATATTTATTACGCAGTCCTATGTACAATAAATATTCTAACACTGTAATAGAAAATGTTCTTAATTCTGCTTCAAAGAAAATACCTATGATGTCATTGATCTGTGGCCCAATAATCCAATACTTAAATCACTGGCAAGACATTTACTTCTATATGTGGGCATCATAA

Protein

MSSKLSLQEVYTAYKRWVISNPSVVTDVETVATWTSYFVAGKINKSPIISEMIYCMSKLLSLYNDRLIRDAYGAETSSYGLREQIKIWLTIIHYSEVFVELIAKDRWGQRGKWTVAALLQLFKASSGLILLYRFKELPISHPPVAFLQRKKYTEGRDVEEHENSFFKLRRSGRVMRRVDGAPPIAFRDWTPVKIKDDRPVPGIEVKDLLYAESLHVLKPLLHLAAMRFFGNKAWKQWFVALSIDIASLKVYNRYMKELSYEQRLEISRRKLGLVLYLLRSPMYNKYSNTVIENVLNSASKKIPMMSLICGPIIQYLNHWQDIYFYMWAS

Similarity

Belongs to the peroxin-16 family.

Uniprot

A0A2W1BSI0   A0A2A4K692   A0A1E1WQR5   A0A2H1W649   A0A0L7KMI7   A0A194QUD0   + More
H9IXP6   I4DK23   A0A194Q5A1   A0A2H1W536   A0A067R457   A0A1Y1K1W6   D2A2L0   B4LG23   B4KYH2   A0A0M4EFM6   A0A1B0FY44   A0A1W4VAA1   B3NIR3   N6TPR3   A0A023ENY4   A0A1L8DVN4   B3M9S8   Q29DA3   A0A3B0J598   B4J3N3   B4QJ66   A0A182XVC5   A0A2P8ZPQ0   A0A1L8DW62   A0A182W2K3   A0A3B0J4M8   B4H7S0   B4IAF2   Q9VPB9   B4N4J6   B4PEQ9   A0A182KDU0   W5JTR9   A0A336M600   A0A182R7M5   A0A1B6I1V5   U5EWX1   A0A2M4AR14   A0A2M4AR03   A0A182FPY4   A0A0K8TSC1   B0XLA6   A0A1W4WR32   A0A2M4BSZ0   B0X2A4   A0A182NG75   A0A310S804   A0A182MQ09   A0A0L0BMY2   A0A2M3ZBR3   A0A2M3ZC05   A0A1Q3FD08   A0A1I8MZ95   A0A182U0U7   A0A182HS15   A0A084W9E8   A0A1B0AQN3   A0A1B6FQW8   W8BHD0   A0A182JA05   A0A034VI41   A0A1A9ZWF8   A0A182QPN6   A0A182XLW7   A0A182LQC6   Q7QKE2   A0A1A9V560   A0A182PEH0   A0A1B0FA34   D3TP55   A0A182V1U8   A0A1I8PBL5   A0A154PAE2   A0A1B6LMU6   A0A1A9YCL7   A0A0K8U514   A0A0A1WS14   A0A232EM49   A0A087ZQV5   K7J7F7   A0A1A9WBC6   A0A0L7R0X0   E0VV12   A0A3B0JTY2   A0A2M3ZC71   A0A2A3E221   A0A1B6E1J0   A0A0M8ZVI5   T1K7X3   A0A2H8TD21   C4WX96   A7SVU6   A0A2S2QAP9  

Pubmed

28756777    26227816    26354079    19121390    22651552    24845553    + More
28004739    18362917    19820115    17994087    23537049    24945155    26483478    15632085    22936249    25244985    29403074    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    20920257    23761445    26369729    26108605    25315136    24438588    24495485    25348373    20966253    12364791    14747013    17210077    20353571    25830018    28648823    20075255    20566863    17615350   

EMBL

KZ149952    PZC76585.1    NWSH01000103    PCG79536.1    GDQN01001722    GDQN01001216    + More
JAT89332.1    JAT89838.1    ODYU01006587    SOQ48560.1    JTDY01008884    KOB64345.1    KQ461108    KPJ09072.1    BABH01015742    AK401641    BAM18263.1    KQ459463    KPJ00539.1    ODYU01006367    SOQ48157.1    KK852907    KDR13990.1    GEZM01095216    JAV55454.1    KQ971338    EFA02007.1    CH940647    EDW70422.1    CH933809    EDW18783.2    CP012525    ALC44784.1    AJVK01005171    CH954178    EDV52559.1    APGK01026024    KB740612    KB632373    ENN79998.1    ERL93770.1    JXUM01016133    GAPW01002436    KQ560450    JAC11162.1    KXJ82360.1    GFDF01003598    JAV10486.1    CH902618    EDV40119.1    CH379070    EAL30511.1    OUUW01000002    SPP76815.1    CH916366    EDV97264.1    CM000363    CM002912    EDX11283.1    KMZ00856.1    PYGN01000002    PSN58450.1    GFDF01003599    JAV10485.1    SPP76814.1    CH479219    EDW34710.1    CH480826    EDW44265.1    AE014296    AY061286    AAF51636.1    AAL28834.1    CH964095    EDW79070.1    CM000159    EDW95133.1    ADMH02000471    ETN66350.1    UFQT01000609    SSX25694.1    GECU01026794    JAS80912.1    GANO01000355    JAB59516.1    GGFK01009889    MBW43210.1    GGFK01009888    MBW43209.1    GDAI01000344    JAI17259.1    DS234380    EDS33776.1    GGFJ01007056    MBW56197.1    DS232283    EDS39127.1    KQ764887    OAD54251.1    AXCM01003522    JRES01001711    KNC20634.1    GGFM01005243    MBW25994.1    GGFM01005244    MBW25995.1    GFDL01009579    JAV25466.1    APCN01000232    ATLV01021732    KE525322    KFB46842.1    JXJN01001976    GECZ01017205    JAS52564.1    GAMC01013914    JAB92641.1    GAKP01017492    GAKP01017490    GAKP01017488    GAKP01017484    JAC41460.1    AXCN02001630    AAAB01008799    EAA03714.3    CCAG010023047    EZ423207    ADD19483.1    KQ434857    KZC08865.1    GEBQ01014917    JAT25060.1    GDHF01030844    JAI21470.1    GBXI01012453    JAD01839.1    NNAY01003423    OXU19434.1    AAZX01003552    KQ414670    KOC64441.1    DS235800    EEB17218.1    SPP76816.1    GGFM01005352    MBW26103.1    KZ288439    PBC25737.1    GEDC01025661    GEDC01005854    GEDC01005524    JAS11637.1    JAS31444.1    JAS31774.1    KQ435826    KOX71980.1    CAEY01001813    GFXV01000206    MBW12011.1    ABLF02035160    AK342522    BAH72516.1    DS469845    EDO32174.1    GGMS01005407    MBY74610.1   

Proteomes

UP000218220    UP000037510    UP000053240    UP000005204    UP000053268    UP000027135    + More
UP000007266    UP000008792    UP000009192    UP000092553    UP000092462    UP000192221    UP000008711    UP000019118    UP000030742    UP000069940    UP000249989    UP000007801    UP000001819    UP000268350    UP000001070    UP000000304    UP000076408    UP000245037    UP000075920    UP000008744    UP000001292    UP000000803    UP000007798    UP000002282    UP000075881    UP000000673    UP000075900    UP000069272    UP000002320    UP000192223    UP000075884    UP000075883    UP000037069    UP000095301    UP000075902    UP000075840    UP000030765    UP000092460    UP000075880    UP000092445    UP000075886    UP000076407    UP000075882    UP000007062    UP000078200    UP000075885    UP000092444    UP000075903    UP000095300    UP000076502    UP000092443    UP000215335    UP000005203    UP000002358    UP000091820    UP000053825    UP000009046    UP000242457    UP000053105    UP000015104    UP000007819    UP000001593   

PRIDE

H9IXP6   

Pfam

PF08610   Pex16

Interpro

IPR013919   Pex16       

ProteinModelPortal

A0A2W1BSI0   A0A2A4K692   A0A1E1WQR5   A0A2H1W649   A0A0L7KMI7   A0A194QUD0   + More
H9IXP6   I4DK23   A0A194Q5A1   A0A2H1W536   A0A067R457   A0A1Y1K1W6   D2A2L0   B4LG23   B4KYH2   A0A0M4EFM6   A0A1B0FY44   A0A1W4VAA1   B3NIR3   N6TPR3   A0A023ENY4   A0A1L8DVN4   B3M9S8   Q29DA3   A0A3B0J598   B4J3N3   B4QJ66   A0A182XVC5   A0A2P8ZPQ0   A0A1L8DW62   A0A182W2K3   A0A3B0J4M8   B4H7S0   B4IAF2   Q9VPB9   B4N4J6   B4PEQ9   A0A182KDU0   W5JTR9   A0A336M600   A0A182R7M5   A0A1B6I1V5   U5EWX1   A0A2M4AR14   A0A2M4AR03   A0A182FPY4   A0A0K8TSC1   B0XLA6   A0A1W4WR32   A0A2M4BSZ0   B0X2A4   A0A182NG75   A0A310S804   A0A182MQ09   A0A0L0BMY2   A0A2M3ZBR3   A0A2M3ZC05   A0A1Q3FD08   A0A1I8MZ95   A0A182U0U7   A0A182HS15   A0A084W9E8   A0A1B0AQN3   A0A1B6FQW8   W8BHD0   A0A182JA05   A0A034VI41   A0A1A9ZWF8   A0A182QPN6   A0A182XLW7   A0A182LQC6   Q7QKE2   A0A1A9V560   A0A182PEH0   A0A1B0FA34   D3TP55   A0A182V1U8   A0A1I8PBL5   A0A154PAE2   A0A1B6LMU6   A0A1A9YCL7   A0A0K8U514   A0A0A1WS14   A0A232EM49   A0A087ZQV5   K7J7F7   A0A1A9WBC6   A0A0L7R0X0   E0VV12   A0A3B0JTY2   A0A2M3ZC71   A0A2A3E221   A0A1B6E1J0   A0A0M8ZVI5   T1K7X3   A0A2H8TD21   C4WX96   A7SVU6   A0A2S2QAP9  

KEGG

105842517    K13335 peroxin-16 | (RefSeq) peroxisomal membrane protein PEX16

PATHWAY

04146    Peroxisome - Bombyx mori (domestic silkworm)

GO

GO:0007031   GO:0005778   GO:0048137   GO:0042760   GO:0007283   GO:0005777  

PANTHER

PTHR13299  

Subcellular location

Peroxisome membrane  

Length:

329

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.55866

Exp number, first 60 AAs:

0.06461

Total prob of N-in:

0.02597

outside

1  -  329

 

 

Pi

11.987909

Theta

11.187964

Tajima's D

0.471709

CLR

0

CSRT

0.522573871306435

Interpretation

Uncertain