SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00049
Annotation
Uncharacterised_protein_[Mycobacterium_tuberculosis]
Location in the cell
PlasmaMembrane   Reliability : 2.128
 

Sequence

CDS
ATGCCCAAGATGCCGTTATATGTATATACTACTAATACTAATTCTGTCATACTACTAATACTACTACTACCAACACTACTACTACCAATACTACGACTACCAATACTACGACTACCAATACTACTACTACCAACACTACTACTACCAATACTATTACTACCAATACTACGACTACCAATACTACTACTACCAATACTACTACTACCAACACTACTAATACCAATACTACTACTACCAACACTACTACTACCAATACTACGACTACCAATACTACTATTACTAATACTACTACTACCAACACTACTACTACCAATACTACTACTAACAATTCTACTACTAACAACACTACTAATACCAATTCTGTCTGTAGCTACCCCGTGGAAGTGA
Protein
MPKMPLYVYTTNTNSVILLILLLPTLLLPILRLPILRLPILLLPTLLLPILLLPILRLPILLLPILLLPTLLIPILLLPTLLLPILRLPILLLLILLLPTLLLPILLLTILLLTTLLIPILSVATPWK

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

Length:
128
Number of predicted TMHs:
4
Exp number of AAs in TMHs:
92.36353
Exp number, first 60 AAs:
41.47813
Total prob of N-in:
0.46128
POSSIBLE N-term signal
sequence
outside
1  -  4
TMhelix
5  -  27
inside
28  -  33
TMhelix
34  -  56
outside
57  -  60
TMhelix
61  -  83
inside
84  -  89
TMhelix
90  -  112
outside
113  -  128
 
 

Population Genetic Test Statistics

Pi
3.661894
Theta
9.130814
Tajima's D
-1.685911
CLR
0
CSRT
0.0375481225938703
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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