Gene

KWMTBOMO00047  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA002039

Annotation

gamma-soluble_nsf_attachment_protein_[Danaus_plexippus]

Location

Bomo_Chr1(-):1343198-1359260      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.671 Nuclear   Reliability : 1.902

CDS

ATGCGTTTGATTGCGAAGGACGCTGCTCGGCCTCTGTTCAACTTGGCACTGGAGGCCTCTAGCCTGTATCAGCAGCACGGGTCCGGGGACAGCGCCGCCGGACTCTTGGACAAGGCCGGTCGCATCCTAGAGCAGGACACACCCCAGCTGGCCGTGAAGCTGTACCAGCACGCTGCCGATATTTCTGCCAACGAGAGCAGCCAGCATCAGGGCATCGAGTACATAAGCAAGGCGTCCAGATTGTTGGTTCGTCTCGAACGCTACGACGAGGCTGTCGATAATTTGCGTCGCGAGATCGGGTTCCATCTTGAAGCGAATAACTTGCCGGCCGTGGGCAGACTGTGCGTGGCCATCGTGCTGGTACAACTGGCCCGCGGCGATACCGTCGCTGCCGAGAAGAGCTACAAGGAATGGGGCGGTCACTGCGAAATGGCCGAAGTGCAGACGTTGGATCAGCTGCTCCAGGCCTACGATGAAGAGGACCCGGATTCCGCTCGCAAGGCCCTCCGTTCCCCGTTCATCCGCAGCATGGACGTGGAGTACTCCCGCCTGGCTAACTGCATCCCGCTTCCGGAGCCACTGGACCCGATGATGCGGGCCGGAGTGCGAGAGAACGCCGCGCCGTCGTACGTCAGCCCTAACGCCAGTACATCCGCCTCGGTGGAACATCATCGTGCCTACGACGAGGAGAATGAGGAATCTCCGTATGAGCCCGTCACTTACGGCCCCAAGAAGATCGAGGAAGAGGACGAAGACGAGGAGCTCTGCTAA

Protein

MRLIAKDAARPLFNLALEASSLYQQHGSGDSAAGLLDKAGRILEQDTPQLAVKLYQHAADISANESSQHQGIEYISKASRLLVRLERYDEAVDNLRREIGFHLEANNLPAVGRLCVAIVLVQLARGDTVAAEKSYKEWGGHCEMAEVQTLDQLLQAYDEEDPDSARKALRSPFIRSMDVEYSRLANCIPLPEPLDPMMRAGVRENAAPSYVSPNASTSASVEHHRAYDEENEESPYEPVTYGPKKIEEEDEDEELC

Uniprot

H9IXQ6   A0A2W1BBA7   A0A2A4JAT7   A0A212EQM0   A0A194PTV9   A0A194QZM9   + More
A0A2J7PL56   A0A2J7PL85   A0A067R1P7   A0A2P8YWW5   A0A1Y1N4C4   A0A1B6GL30   E0W1T6   D6WIT9   A0A2M3ZIL5   A0A182Q2P4   W5JD93   A0A182WB39   A0A2M4BU71   A0A2M4AQB4   A0A182RF82   T1DTD4   A0A154PLN7   A0A336MX58   A0A182FDN5   A0A182NGU9   A0A182VP55   E2BSU7   Q7Q6W8   A0A182XMY3   A0A182LJ62   A0A182MUH8   A0A232F1B1   K7J6B2   A0A182PHL0   A0A182Y189   A0A084W9Z0   B0WC92   A0A023EPJ3   A0A182GG38   A0A182J0F2   Q16SG8   A0A0M8ZVC9   U5EYE1   E9J7J4   A0A0J7KX45   A0A182G2J5   A0A1Q3FGW5   A0A182TYS6   A0A1I8NDJ5   A0A2A3E442   V9IKI0   A0A088A5R0   T1PC55   A0A151JLL2   A0A158NYZ3   A0A034WV86   A0A0C9S0H5   A0A151I5C6   F4W554   A0A0K8TSX6   A0A182HWT7   A0A1B6CXK6   A0A026W7R2   E2AN98   A0A195D0U7   A0A1I8PG99   A0A224XSA5   A0A2R7VT43   T1IE43   A0A0A9YF54   A0A146LWN8   A0A0N7Z8N6   A0A1J1J823   A0A069DSW4   A0A1S4EGW3   A0A023F1Z5   A0A0V0G6D3   A0A182JV78   A0A310SBX5   A0A151WQL2   A0A226EWY4   A0A1A9WP66   A0A1B6EA46   A0A195FSM5   A0A240SX67   D3TKN6   A0A240SWW5   A0A1A9Y6J6   A0A1B0BIB0   A0A1A9UJ22   A0A0K8W9U2   A0A0L7R9N8   W8C2Z8   A0A0A1WWM4   W8C7Z4  

Pubmed

19121390    28756777    22118469    26354079    24845553    29403074    + More
28004739    20566863    18362917    19820115    20920257    23761445    20798317    12364791    14747013    17210077    20966253    28648823    20075255    25244985    24438588    24945155    26483478    17510324    21282665    25315136    21347285    25348373    21719571    26369729    24508170    30249741    25401762    26823975    27129103    26334808    25474469    20353571    24495485    25830018   

EMBL

BABH01015695    BABH01015696    BABH01015697    BABH01015698    BABH01015699    BABH01015700    + More
BABH01015701    KZ150173    PZC72592.1    NWSH01002101    PCG69195.1    AGBW02013268    OWR43790.1    KQ459593    KPI96752.1    KQ461108    KPJ09051.1    NEVH01024428    PNF17070.1    PNF17069.1    KK852811    KDR15922.1    PYGN01000311    PSN48741.1    GEZM01013087    JAV92761.1    GECZ01006610    JAS63159.1    DS235873    EEB19668.1    KQ971335    EEZ99648.1    GGFM01007598    MBW28349.1    AXCN02000366    ADMH02001494    ETN62317.1    GGFJ01007476    MBW56617.1    GGFK01009665    MBW42986.1    GAMD01001029    JAB00562.1    KQ434972    KZC12743.1    UFQT01003315    SSX34846.1    GL450269    EFN81239.1    AAAB01008960    EAA10924.4    AXCM01000869    NNAY01001263    OXU24566.1    ATLV01021973    KE525326    KFB47034.1    DS231886    EDS43337.1    GAPW01002668    JAC10930.1    JXUM01061030    JXUM01061031    JXUM01061032    KQ562131    KXJ76616.1    CH477673    EAT37431.1    KQ435828    KOX71890.1    GANO01000354    JAB59517.1    GL768539    EFZ11211.1    LBMM01002238    KMQ95087.1    JXUM01139534    JXUM01139535    JXUM01139536    JXUM01139537    JXUM01139538    KQ568916    KXJ68844.1    GFDL01008215    JAV26830.1    KZ288400    PBC26264.1    JR052145    AEY61628.1    KA646346    AFP60975.1    KQ978993    KYN26691.1    ADTU01004412    GAKP01000730    JAC58222.1    GBYB01014066    JAG83833.1    KQ976448    KYM85877.1    GL887605    EGI70650.1    GDAI01000367    JAI17236.1    APCN01001538    GEDC01019177    JAS18121.1    KK107419    QOIP01000003    EZA51079.1    RLU24490.1    GL441149    EFN65100.1    KQ977004    KYN06487.1    GFTR01005106    JAW11320.1    KK854006    PTY09125.1    ACPB03000234    GBHO01036075    GBHO01036005    GBHO01014083    GBHO01011912    JAG07529.1    JAG07599.1    JAG29521.1    JAG31692.1    GDHC01012184    GDHC01007040    JAQ06445.1    JAQ11589.1    GDKW01002843    JAI53752.1    CVRI01000075    CRL08547.1    GBGD01002132    JAC86757.1    GBBI01003344    JAC15368.1    GECL01002559    JAP03565.1    KQ769940    OAD52733.1    KQ982821    KYQ50189.1    LNIX01000001    OXA61667.1    GEDC01002497    JAS34801.1    KQ981276    KYN43590.1    EZ421968    EZ422203    ADD18264.1    ADD18396.1    CCAG010018850    JXJN01014867    GDHF01004694    JAI47620.1    KQ414627    KOC67471.1    GAMC01000238    JAC06318.1    GBXI01010828    JAD03464.1    GAMC01000237    JAC06319.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053268    UP000053240    UP000235965    + More
UP000027135    UP000245037    UP000009046    UP000007266    UP000075886    UP000000673    UP000075920    UP000075900    UP000076502    UP000069272    UP000075884    UP000075903    UP000008237    UP000007062    UP000076407    UP000075882    UP000075883    UP000215335    UP000002358    UP000075885    UP000076408    UP000030765    UP000002320    UP000069940    UP000249989    UP000075880    UP000008820    UP000053105    UP000036403    UP000075902    UP000095301    UP000242457    UP000005203    UP000078492    UP000005205    UP000078540    UP000007755    UP000075840    UP000053097    UP000279307    UP000000311    UP000078542    UP000095300    UP000015103    UP000183832    UP000079169    UP000075881    UP000075809    UP000198287    UP000091820    UP000078541    UP000092445    UP000092444    UP000092443    UP000092460    UP000078200    UP000053825   

PRIDE

H9IXQ6   

Pfam

PF09177   Syntaxin-6_N

Interpro

IPR000744   NSF_attach        + More
IPR011990   TPR-like_helical_dom_sf       
IPR000727   T_SNARE_dom       
IPR015260   Syntaxin-6_N       
IPR010989   SNARE       

SUPFAM

SSF48452   SSF48452        + More
SSF47661   SSF47661       

Gene 3D

1.25.40.10    

ProteinModelPortal

H9IXQ6   A0A2W1BBA7   A0A2A4JAT7   A0A212EQM0   A0A194PTV9   A0A194QZM9   + More
A0A2J7PL56   A0A2J7PL85   A0A067R1P7   A0A2P8YWW5   A0A1Y1N4C4   A0A1B6GL30   E0W1T6   D6WIT9   A0A2M3ZIL5   A0A182Q2P4   W5JD93   A0A182WB39   A0A2M4BU71   A0A2M4AQB4   A0A182RF82   T1DTD4   A0A154PLN7   A0A336MX58   A0A182FDN5   A0A182NGU9   A0A182VP55   E2BSU7   Q7Q6W8   A0A182XMY3   A0A182LJ62   A0A182MUH8   A0A232F1B1   K7J6B2   A0A182PHL0   A0A182Y189   A0A084W9Z0   B0WC92   A0A023EPJ3   A0A182GG38   A0A182J0F2   Q16SG8   A0A0M8ZVC9   U5EYE1   E9J7J4   A0A0J7KX45   A0A182G2J5   A0A1Q3FGW5   A0A182TYS6   A0A1I8NDJ5   A0A2A3E442   V9IKI0   A0A088A5R0   T1PC55   A0A151JLL2   A0A158NYZ3   A0A034WV86   A0A0C9S0H5   A0A151I5C6   F4W554   A0A0K8TSX6   A0A182HWT7   A0A1B6CXK6   A0A026W7R2   E2AN98   A0A195D0U7   A0A1I8PG99   A0A224XSA5   A0A2R7VT43   T1IE43   A0A0A9YF54   A0A146LWN8   A0A0N7Z8N6   A0A1J1J823   A0A069DSW4   A0A1S4EGW3   A0A023F1Z5   A0A0V0G6D3   A0A182JV78   A0A310SBX5   A0A151WQL2   A0A226EWY4   A0A1A9WP66   A0A1B6EA46   A0A195FSM5   A0A240SX67   D3TKN6   A0A240SWW5   A0A1A9Y6J6   A0A1B0BIB0   A0A1A9UJ22   A0A0K8W9U2   A0A0L7R9N8   W8C2Z8   A0A0A1WWM4   W8C7Z4  

PDB

2IFU     E-value=2.90305e-26,     Score=292

KEGG

101744289    K21198 gamma-soluble NSF attachment protein | (RefSeq) gamma-soluble NSF attachment protein-like

GO

GO:0005623   GO:0006886   GO:0005483   GO:0005774   GO:0031201   GO:0019905   GO:0016021   GO:0048193   GO:0016020   GO:0005515   GO:0004803   GO:0006313   GO:0008081   GO:0005524   GO:0048013   GO:0005003   GO:0005887   GO:0007169  

PANTHER

PTHR13768  

Length:

256

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.03252

Exp number, first 60 AAs:

0.00039

Total prob of N-in:

0.12638

outside

1  -  256

 

 

Pi

22.643858

Theta

20.514208

Tajima's D

-0.68837

CLR

0.00217

CSRT

0.198990050497475

Interpretation

Possibly Positive selection