SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00045
Pre Gene Modal
BGIBMGA002089
Annotation
hypothetical_protein_KGM_08765_[Danaus_plexippus]
Location in the cell
Nuclear   Reliability : 2.303
 

Sequence

CDS
ATGCCTAAAAACATAACTAGTGAAGTGCGCGAAATAATATTAAAAGTGAAAGAGTTTATGGACGAAGAGAAACGAATGCAAGTTCCTATAATTCCTCTGAGTAAAGTTTATGTTCGAGTTTCGGCCGCCACAGGTGTTTCAGAGCGCACCGTTCTTAACATCGCGAGGGAAGCACGACTAGTGGAACAAGGCCTCTTAGACCCTGAAACTTTAAAAAAGAGTCCAAAAAAAAGAGTACGAACTAAAGGTAAAATTGAAGTTGATGAGTATGATTTGCAAGTAATCAGAAGAAAGATTCACGAATTCTATGCTTTCAAAAAAGAAGTTCCAACTATTAACAAGTTGCTACAAATTTTAAAGGAAGAAATAAATTTCAAAGGTTCTAGAGAAACCTTACGTAAGATACTCCGTAAGAATGGTTTCCAGTTCAGAAAAACGAAGAACAATAAAGACAAAGAACAAGCACCTCAGCAGCCCACATCAGTACCTCCTATGGTACCGCCATACATTCATACTATGTTCAGTCATAAGTCCATACAATCATAG
Protein
MPKNITSEVREIILKVKEFMDEEKRMQVPIIPLSKVYVRVSAATGVSERTVLNIAREARLVEQGLLDPETLKKSPKKRVRTKGKIEVDEYDLQVIRRKIHEFYAFKKEVPTINKLLQILKEEINFKGSRETLRKILRKNGFQFRKTKNNKDKEQAPQQPTSVPPMVPPYIHTMFSHKSIQS

Summary

EMBL
BABH01015692    KZ149922    PZC77689.1    AGBW02013268    OWR43791.1    ODYU01002423    + More
SOQ39884.1    NWSH01000779    PCG74286.1    JTDY01000835    KOB75724.1    KQ461108    KPJ09050.1    KQ459593    KPI96753.1    JTDY01001355    KOB74093.1    KQ460205    KPJ17030.1    GEBQ01029524    JAT10453.1    GEBQ01023353    JAT16624.1    GDRN01091729    GDRN01091726    JAI60230.1    GEBQ01011591    GEBQ01005345    JAT28386.1    JAT34632.1    JTDY01002813    KOB70672.1    KOB70671.1    JTDY01012247    KOB52309.1    GEZM01021609    JAV88910.1    BABH01021155    NEVH01009382    PNF33229.1    PYGN01000629    PSN43112.1    NWSH01000101    PCG79555.1    NWSH01000134    PCG79204.1    GECU01016468    JAS91238.1    ODYU01004103    SOQ43625.1    JTDY01003939    KOB68804.1    KK853256    KDR09268.1    GEDC01019090    JAS18208.1    KK855644    PTY23394.1    JTDY01004137    KOB68538.1    GBHO01014009    JAG29595.1    KQ460545    KPJ14061.1    KQ459463    KPJ00470.1    NWSH01001277    PCG71879.1    ODYU01006492    SOQ48372.1    KZ149995    PZC75444.1    PYGN01001154    PSN37128.1    PYGN01001102    PSN37568.1    PYGN01000361    PSN47697.1    DS235371    EEB15384.1    GBHO01036263    GBHO01036262    JAG07341.1    JAG07342.1    GEDC01002349    JAS34949.1    PYGN01002415    PSN30531.1    GGMR01002380    MBY14999.1    PYGN01000235    PSN50533.1    PYGN01000042    PSN56451.1    GECU01022779    JAS84927.1    GECU01018569    JAS89137.1    GDRN01060820    JAI65298.1    GGMR01001387    MBY14006.1    PYGN01000078    PSN54969.1    PYGN01001042    PSN38197.1    GECU01028741    GECU01012844    JAS78965.1    JAS94862.1    EEB15387.1    KB632352    ERL93286.1    APGK01034689    KB740914    ENN78406.1    GEZM01002076    JAV97380.1    GGMR01003609    MBY16228.1    GGMS01017704    MBY86907.1    GGMR01017933    MBY30552.1    PYGN01001677    PSN33428.1   
Pfam
PF13358   DDE_3        + More
PF05485   THAP
Interpro
IPR038717   Tc1-like_DDE_dom        + More
IPR036179   Ig-like_dom_sf       
IPR003598   Ig_sub2       
IPR013783   Ig-like_fold       
IPR003599   Ig_sub       
IPR007110   Ig-like_dom       
IPR006612   THAP_Znf       
IPR038441   THAP_Znf_sf       
SUPFAM
SSF48726   SSF48726       
Gene 3D

Ontologies

Topology

Length:
181
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00357
Exp number, first 60 AAs:
0.00341
Total prob of N-in:
0.22408
outside
1  -  181
 
 

Population Genetic Test Statistics

Pi
3.15496
Theta
13.617284
Tajima's D
-1.235902
CLR
0.285472
CSRT
0.096345182740863
Interpretation
Possibly Positive selection
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号