Gene

KWMTBOMO00037

Pre Gene Modal

BGIBMGA002044

Annotation

PREDICTED:_antigen_LPMC-61_[Bombyx_mori]

Location

Bomo_Chr1(-):1206558-1209725      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.049 Extracellular   Reliability : 1.026 Nuclear   Reliability : 1.081

CDS

ATGGTCACCGTCAGTGCAGATAGTCACCACCGCTTCAAAATGAGGGTGCTCACTGCTACGATTTGGGTGGTGCTGGCCATCGCGGCATCGGTAGCCGTACCGATCCAGGACGTGTCAAGCGACACCGAGTTAACAAGGGAAAAACGTTCTCCTGGAGGATGGCACTCGCCACCGCCGGAAGGTGTTTGGAAGAAGAAACTCGTCTGGAAGGAAGAGTGGAAGCAGATCTGGAAAACCGAAAAAAAACTCGCCTGGAAATCTGAGTGGAAGAAAGAAAAAGAACCCGCCTGGAAAACTGAACAGGTACAACAGTGGAAAGAAGAACAGGTGCCAGCCTGGAAGGTAGTACAGAAACCTATTTGGAAAGAAGTGCAAGTACCGGTGTGGAAAGAAGTTCAAGTGCCTGATTGGAAGAAAGTCTGGAAACCGGTATGGAAAGAAATACAAGTTCCGGTAACGAAAGACATTCAGGTGCCAGAATGGAAACAGAACTTTATACCTGCTTGGGTCAAAGAGGGCGTGCCCGGTGAGAAATATCTAGGGAAAGATGATCACGGCTGGGAATATACCAGTCACGATCTATGGAGAAAAAAAATGATCTGGAAACCGGTATGGAAGAAAGTTTGGAAGACCGTGCAGAAGCAAGAGTGGGTCACCGAGAAGAAATTGGAATGGAAAGAAGAATGGAAACAAATCTGGAAAACTGAAAAGAAACAGGCTTGGGTAACCGAGAAAAAACAGGAATGGGTAGACGAGAAGGTGCAAATTTGGAAAACCGTTAAGAAAGAAGTCTGGGTGCCGGTACAGAAGAAAATATGGGTTGAGAAATGGAAGCAAATTCAAGTACCGATCTGGAAGACCATAGAAGTGCCCGCATGGAAAAAGGTATGGAAGCCGGTTTGGGAGAAGGTTTGGGTACCGATTCATCATGAGCACCACGAACATCACGGATGGGATTGA

Protein

MVTVSADSHHRFKMRVLTATIWVVLAIAASVAVPIQDVSSDTELTREKRSPGGWHSPPPEGVWKKKLVWKEEWKQIWKTEKKLAWKSEWKKEKEPAWKTEQVQQWKEEQVPAWKVVQKPIWKEVQVPVWKEVQVPDWKKVWKPVWKEIQVPVTKDIQVPEWKQNFIPAWVKEGVPGEKYLGKDDHGWEYTSHDLWRKKMIWKPVWKKVWKTVQKQEWVTEKKLEWKEEWKQIWKTEKKQAWVTEKKQEWVDEKVQIWKTVKKEVWVPVQKKIWVEKWKQIQVPIWKTIEVPAWKKVWKPVWEKVWVPIHHEHHEHHGWD

Uniprot

H9IXR1   A0A2H1WNQ3   A0A2W1BYD2   A0A2A4JKT5   A0A0L7KV05   I4DLU9   + More
I4DIB5   A0A212EQP1   A0A194Q2A3   A0A194R1X3   A0A1B0CYN5   E2BXB1   A0A310SGY7   A0A0L7QWY3   E9J2C4   A0A154NYW6   A0A182I0U0   A0A195FXH3   A0A182VSU8   A0A182VCY3   A0A182PK80   A0A182KJV6   A0A2J7R633   A0A158P0R9   A0A182KDH4   T1HVF6   A0A182N8U3   A0A2J7R634   A0A182TYM0   A0A1S4H4E2   A0A1I8Q314   A0A182RAC7   A0A182FYZ1   A0A182JH98   A0A084W5K0   A0A182X7B5   A0A182M288   A0A182TVJ6   A0A1W4WFF6   A0A3B0JD21   U4UJS0   B3MI65   B4KTZ6   Q292T2   B4GCN6   A0A1I8N089   B0W1D8   A0A1W4VE85   B4LN71   N6TKB9   A0A182QQU0   B4HQS9   B4NS40   W8BBH2   H0RNI2   A1Z6X0   B3NA09   Q960I1   A0A182GAC4   B4P1M8   B4J4B7   B4MPZ5   A0A034VYS4   A0A0K8VIM3   J9K1Q3   A0A0A1X3F9   A0A0A1WWZ6   D6WI75   A0A067RMA2   A0A0L0CF31   A0A182T1R2   A0A1S4G7Y8  

Pubmed

19121390    28756777    26227816    22651552    22118469    26354079    + More
20798317    21282665    20966253    21347285    12364791    24438588    23537049    17994087    15632085    25315136    22936249    24495485    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    26483478    17550304    25348373    25830018    18362917    19820115    24845553    26108605    17510324   

EMBL

BABH01015679    ODYU01009906    SOQ54637.1    KZ149922    PZC77696.1    NWSH01001109    + More
PCG72571.1    JTDY01005537    KOB66906.1    AK402267    BAM18889.1    AK401033    BAM17655.1    AGBW02013268    OWR43797.1    KQ459589    KPI97535.1    KQ460870    KPJ11692.1    AJVK01009261    GL451230    EFN79694.1    KQ767283    OAD53439.1    KQ414705    KOC63105.1    GL767845    EFZ13023.1    KQ434783    KZC04813.1    APCN01005266    KQ981200    KYN45012.1    NEVH01006982    PNF36290.1    ADTU01005771    ACPB03010898    ACPB03010899    ACPB03010900    ACPB03010901    PNF36291.1    AAAB01008980    ATLV01020669    KE525304    KFB45494.1    AXCM01000224    OUUW01000001    SPP73120.1    KB632234    ERL90426.1    CH902619    EDV35910.1    CH933808    EDW08573.2    CM000071    EAL24779.2    CH479181    EDW31484.1    DS231821    EDS45008.1    CH940648    EDW60075.2    APGK01034525    APGK01034526    KB740914    ENN78358.1    AXCN02001866    CH480816    EDW46739.1    CH981838    CM002911    EDX15418.1    KMY91941.1    GAMC01016089    JAB90466.1    BT132904    AEV66554.1    AE013599    AAF59272.1    AHN55955.1    CH954177    EDV59705.1    AY052050    AAK93474.1    JXUM01051008    KQ561671    KXJ77848.1    CM000157    EDW89164.1    CH916367    EDW01599.1    CH963849    EDW74184.1    GAKP01011368    JAC47584.1    GDHF01023449    GDHF01013580    GDHF01001906    JAI28865.1    JAI38734.1    JAI50408.1    ABLF02027206    GBXI01008886    JAD05406.1    GBXI01011354    JAD02938.1    KQ971321    EFA00029.2    KK852542    KDR21720.1    JRES01000487    KNC30822.1   

Proteomes

UP000005204    UP000218220    UP000037510    UP000007151    UP000053268    UP000053240    + More
UP000092462    UP000008237    UP000053825    UP000076502    UP000075840    UP000078541    UP000075920    UP000075903    UP000075885    UP000075882    UP000235965    UP000005205    UP000075881    UP000015103    UP000075884    UP000075902    UP000095300    UP000075900    UP000069272    UP000075880    UP000030765    UP000076407    UP000075883    UP000192223    UP000268350    UP000030742    UP000007801    UP000009192    UP000001819    UP000008744    UP000095301    UP000002320    UP000192221    UP000008792    UP000019118    UP000075886    UP000001292    UP000000304    UP000000803    UP000008711    UP000069940    UP000249989    UP000002282    UP000001070    UP000007798    UP000007819    UP000007266    UP000027135    UP000037069    UP000075901   

PRIDE

H9IXR1    H0RNI2    Q960I1   

Pfam

PF16086   DUF4816        + More
PF16058   Mucin-like

Interpro

IPR032134   DUF4816        + More
IPR009078   Ferritin-like_SF       
IPR032059   Mucin-like       

SUPFAM

SSF47240   SSF47240       

ProteinModelPortal

H9IXR1   A0A2H1WNQ3   A0A2W1BYD2   A0A2A4JKT5   A0A0L7KV05   I4DLU9   + More
I4DIB5   A0A212EQP1   A0A194Q2A3   A0A194R1X3   A0A1B0CYN5   E2BXB1   A0A310SGY7   A0A0L7QWY3   E9J2C4   A0A154NYW6   A0A182I0U0   A0A195FXH3   A0A182VSU8   A0A182VCY3   A0A182PK80   A0A182KJV6   A0A2J7R633   A0A158P0R9   A0A182KDH4   T1HVF6   A0A182N8U3   A0A2J7R634   A0A182TYM0   A0A1S4H4E2   A0A1I8Q314   A0A182RAC7   A0A182FYZ1   A0A182JH98   A0A084W5K0   A0A182X7B5   A0A182M288   A0A182TVJ6   A0A1W4WFF6   A0A3B0JD21   U4UJS0   B3MI65   B4KTZ6   Q292T2   B4GCN6   A0A1I8N089   B0W1D8   A0A1W4VE85   B4LN71   N6TKB9   A0A182QQU0   B4HQS9   B4NS40   W8BBH2   H0RNI2   A1Z6X0   B3NA09   Q960I1   A0A182GAC4   B4P1M8   B4J4B7   B4MPZ5   A0A034VYS4   A0A0K8VIM3   J9K1Q3   A0A0A1X3F9   A0A0A1WWZ6   D6WI75   A0A067RMA2   A0A0L0CF31   A0A182T1R2   A0A1S4G7Y8  

KEGG

101743424    no KO assigned | (RefSeq) antigen LPMC-61

GO

GO:0016021  

SignalP

Position:   1 - 32,         Likelihood:  0.627536

 

 

Length:

319

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

20.30773

Exp number, first 60 AAs:

20.30773

Total prob of N-in:

0.94112

POSSIBLE N-term signal

sequence

inside

1  -  12

TMhelix

13  -  35

outside

36  -  319

 

 

Pi

32.813065

Theta

26.440319

Tajima's D

0.992998

CLR

0

CSRT

0.664866756662167

Interpretation

Uncertain