Gene

KWMTBOMO00036

Pre Gene Modal

BGIBMGA002045

Annotation

PREDICTED:_alpha-1?3-mannosyl-glycoprotein_4-beta-N-acetylglucosaminyltransferase_B-like_[Bombyx_mori]

Location

Bomo_Chr1(-):1078135-1122035      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.076 Mitochondrial   Reliability : 1.283 PlasmaMembrane   Reliability : 1.035

CDS

ATGGCAAAAAAAATAACATCGCTAGAGGAGAAATTGAACAACTTTGAAGTCCGATATCGAGTAAAACCAGTTACCTATAACTTTCCGAAAGAGACTGCGCCATATCCTCCGGGCTACAGTGAAGAAGCAATGAACATGATACACAACTTGACAGGGACCAGAGTACTGAACGGTTTGCAGCCAAGGTACATCCACCGCATGCAGTTGCCGTTTCTCGTCCAAATTCTGACTCACTTGCTCAATGACCCGTTTAGCTTATGGCCCCTTTATCATCTCTCCGGCGCTAGACACTACATGGATTTTGTCATCGGAATACCGACTGTCAAGAGAGATAAACAGACATACCTCTTCACTACTTTGACGTATCTCATTAAGGCACTATCAGCGGAAGACAAAAGATCAGTCGTCATCGTTATCTTAGTTGGTGAGCCTGACGTAACTTACATACTGAAACTGGCTAGACAGATAGAAATAATGTTTCCAAGAGAAATTAGTGACGGTGTCATCGAAATCCTAGCACCAAGTCCGGCTTACTACCCAGAACTTGAGGATTTGTGTCCGACTCTTGGTGATTCCCCGAAACGAGCCATGTGGCGAACCAAACAGAATTTGGACAACATCTATCTTATGGCCTACGCTATTAGCAAGGGAGTCTACTATCTGATGCTGGAAGATGATGTTACAACTAAAAAAGATTTCTTACCGGAAATGAAAGGTTACATTAAGACTACGACTGAAAAGACCCCTCACTGGATTTTCATTGAATTCTGTCAGGTCGGCGCCATCGGAAAAGTTTTCAGAACAAGGGATCTACTGCCTTTTGTGACGTACTCACAGATATTTTACAGCAACATGCCCATAGACTGGCTATTGGAGAGCTATTTGGCCGATCGTGTCTGTTCTATTGACAAAAAGTCTAAATCGTGTGCTGAAAGCAAACTCCGCGTCCGACCACGGTATAAGGTCTCGCTGTTCCAGCACATCGGTGTATACTCCTCGCTGCAGGGAAAGATACAGAAGGTTCAGGACCCGCAGTTTGGCAAGGTCCAGTCGTATTTTCCACACCAGAATCCGCCAGCGCAAAAGATCACGACAACAATCGAGGATTACTACCAGCACAGTATCCAGAACGCTTATGAGGGAATCGATTTTTTCTGGGGCAAAAAACCCAAGAAAGGAGATACTCTAGAGTTTTGGTACGGAAGACCACTGCAGATTAAAAGGGTTACGTTCCGGAGTGGGAATGCTGAACATATCACGGATCAGTTTTACAACACCGTTGTAGAGGTTTTACCGGCTTTCGGGGACAACAACTTCACTACTATCCTGCACTTCGATGAATTTGGACTAGCAGACGGCGACGTGGAGGAGGAATTCTCTCTGGTCAAAGCGATCAGACTGAGAGTTAACGCGGATAGCAAGTATTGGGTCATCTTGAGCGAGGAGTATGCAATTTTCCACACTTATAGAGAATATAGAGAAGAAGTGCACAATGCTAATATTTTTTTTAAATAA

Protein

MAKKITSLEEKLNNFEVRYRVKPVTYNFPKETAPYPPGYSEEAMNMIHNLTGTRVLNGLQPRYIHRMQLPFLVQILTHLLNDPFSLWPLYHLSGARHYMDFVIGIPTVKRDKQTYLFTTLTYLIKALSAEDKRSVVIVILVGEPDVTYILKLARQIEIMFPREISDGVIEILAPSPAYYPELEDLCPTLGDSPKRAMWRTKQNLDNIYLMAYAISKGVYYLMLEDDVTTKKDFLPEMKGYIKTTTEKTPHWIFIEFCQVGAIGKVFRTRDLLPFVTYSQIFYSNMPIDWLLESYLADRVCSIDKKSKSCAESKLRVRPRYKVSLFQHIGVYSSLQGKIQKVQDPQFGKVQSYFPHQNPPAQKITTTIEDYYQHSIQNAYEGIDFFWGKKPKKGDTLEFWYGRPLQIKRVTFRSGNAEHITDQFYNTVVEVLPAFGDNNFTTILHFDEFGLADGDVEEEFSLVKAIRLRVNADSKYWVILSEEYAIFHTYREYREEVHNANIFFK

Uniprot

H9IXR2   A0A194PUU5   A0A194QVQ1   A0A2W1BRJ2   A0A2A4JGS9   A0A2H1VVH9   + More
A0A1E1W9P3   D6WG02   A0A182UE50   A0A182HPG5   A0A182X101   A0A182QA46   A0A182VNY6   A0A182NLT5   A0A182LB26   Q7QAY7   A0A067QZG9   A0A2M4AKR7   A0A182P5X9   A0A182WM84   A0A1Y1MST2   A0A2M4AIH2   A0A2M4AI64   A0A2M4BJ50   A0A182FMR8   A0A2J7R874   A0A0K8TSS2   A0A182YJ41   A0A182KEI4   W5J9H4   A0A2M4CWY5   Q16HU9   T1E200   A0A1S4G091   A0A0P4W976   T1IBH9   A0A1L8E1D3   A0A1L8E1H4   A0A026WWI2   A0A182RUV0   A0A023F1M6   A0A1B0D404   A0A232F6Z8   A0A2P8XTL8   K7J4Z9   E2C7Z5   E2AZS7   B0WPM2   A0A088A8H1   A0A1Q3F8M1   A0A2A3E1Y9   A0A158NT14   A0A0L7QSD0   A0A195EHF9   A0A195FEQ3   A0A151I3W6   A0A195CBI7   A0A151X6M2   A0A1B6DQQ2   B3MAW1   B4QK27   B4HHT1   A0A0J9RWI7   B4PIG7   B4KVK8   Q9VUH4   B3ND57   A0A1B6KAN6   A0A084WDQ3   U4UTX5   B4LF55   Q20C84   Q8SYS6   A0A2M3ZAJ8   A0A154NYP7   F4WY76   A0A182M6G1   A0A1W4UMP4   A0A182F1M7   A0A0A1WZH1   Q2M170   B4GUJ6   A0A3B0J7E7   W8C2C4   A0A1Q3F8R1   A0A0K8V461   B4J3T6   A0A1S3IVW2   A0A2P2HXG7   A0A0P4W3N6   A0A087UN81   B4NM20   A0A310SQI0   A0A0J7L522   A0A1B0BAT4   A0A1A9Y5W0   A0A1A9US36   A0A1B0GD15   A0A1B0AJE6   A0A3B3CK06  

Pubmed

19121390    26354079    28756777    18362917    19820115    20966253    + More
9087549    12364791    14747013    17210077    24845553    28004739    26369729    25244985    20920257    23761445    17510324    24330624    24508170    30249741    25474469    28648823    29403074    20075255    20798317    21347285    17994087    22936249    17550304    18057021    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    24438588    23537049    16507169    21719571    25830018    15632085    24495485    29451363   

EMBL

BABH01015669    BABH01015670    BABH01015671    KQ459593    KPI96758.1    KQ461108    + More
KPJ09045.1    KZ149922    PZC77699.1    NWSH01001451    PCG71181.1    ODYU01004693    SOQ44845.1    GDQN01007473    JAT83581.1    KQ971328    EFA00960.2    APCN01003003    AXCN02000964    AAAB01008882    EAA08711.4    KK853156    KDR10509.1    GGFK01008064    MBW41385.1    GEZM01023886    GEZM01023885    JAV88168.1    GGFK01007262    MBW40583.1    GGFK01007149    MBW40470.1    GGFJ01003840    MBW52981.1    NEVH01006723    PNF37036.1    GDAI01000613    JAI16990.1    ADMH02002077    ETN59510.1    GGFL01005543    MBW69721.1    CH478140    EAT33825.1    GALA01001204    JAA93648.1    GDRN01090296    GDRN01090293    JAI60485.1    ACPB03000224    GFDF01001546    JAV12538.1    GFDF01001545    JAV12539.1    KK107078    QOIP01000011    EZA60435.1    RLU17269.1    GBBI01003290    JAC15422.1    AJVK01011124    AJVK01011125    NNAY01000815    OXU26362.1    PYGN01001366    PSN35353.1    GL453506    EFN75913.1    GL444277    EFN61056.1    DS232027    EDS32425.1    GFDL01011143    JAV23902.1    KZ288470    PBC25342.1    ADTU01025473    KQ414758    KOC61547.1    KQ978957    KYN27307.1    KQ981636    KYN38873.1    KQ976472    KYM83975.1    KQ978023    KYM98060.1    KQ982476    KYQ56063.1    GEDC01009297    JAS28001.1    CH902618    EDV39195.1    CM000363    EDX10465.1    CH480815    EDW41496.1    CM002912    KMY99624.1    CM000159    EDW94524.2    KRK01905.1    CH933809    EDW19479.1    KRG06650.1    KRG06651.1    AE014296    BT044089    AAF49707.2    ACH92154.1    CH954178    EDV51779.2    KQS43973.1    GEBQ01031723    JAT08254.1    ATLV01023053    KE525340    KFB48347.1    KB632366    ERL93651.1    CH940647    EDW70243.1    KRF84805.1    DQ378286    ABD64801.1    AY071339    AAL48961.1    GGFM01004816    MBW25567.1    KQ434783    KZC04747.1    GL888439    EGI60833.1    AXCM01013828    GBXI01014632    GBXI01013648    GBXI01011187    GBXI01010387    GBXI01009019    GBXI01003018    JAC99659.1    JAD00644.1    JAD03105.1    JAD03905.1    JAD05273.1    JAD11274.1    CH379069    EAL30705.1    CH479191    EDW26279.1    OUUW01000002    SPP76053.1    GAMC01010666    JAB95889.1    GFDL01011103    JAV23942.1    GDHF01019035    GDHF01018602    GDHF01010917    GDHF01001393    JAI33279.1    JAI33712.1    JAI41397.1    JAI50921.1    CH916366    EDV97317.1    IACF01000564    LAB66330.1    GDRN01090292    JAI60486.1    KK120684    KFM78820.1    CH964278    EDW85388.1    KRG00223.1    KQ761005    OAD58417.1    LBMM01000722    KMQ97638.1    JXJN01011148    CCAG010002262   

Proteomes

UP000005204    UP000053268    UP000053240    UP000218220    UP000007266    UP000075902    + More
UP000075840    UP000076407    UP000075886    UP000075903    UP000075884    UP000075882    UP000007062    UP000027135    UP000075885    UP000075920    UP000069272    UP000235965    UP000076408    UP000075881    UP000000673    UP000008820    UP000015103    UP000053097    UP000279307    UP000075900    UP000092462    UP000215335    UP000245037    UP000002358    UP000008237    UP000000311    UP000002320    UP000005203    UP000242457    UP000005205    UP000053825    UP000078492    UP000078541    UP000078540    UP000078542    UP000075809    UP000007801    UP000000304    UP000001292    UP000002282    UP000009192    UP000000803    UP000008711    UP000030765    UP000030742    UP000008792    UP000076502    UP000007755    UP000075883    UP000192221    UP000001819    UP000008744    UP000268350    UP000001070    UP000085678    UP000054359    UP000007798    UP000036403    UP000092460    UP000092443    UP000078200    UP000092444    UP000092445    UP000261560   

PRIDE

H9IXR2    Q8SYS6   

Pfam

PF00515   TPR_1        + More
PF13181   TPR_8

Interpro

IPR006759   Glyco_transf_54        + More
IPR011990   TPR-like_helical_dom_sf       
IPR001440   TPR_1       
IPR019734   TPR_repeat       
IPR013026   TPR-contain_dom       

SUPFAM

SSF48452   SSF48452       

Gene 3D

1.25.40.10    

ProteinModelPortal

H9IXR2   A0A194PUU5   A0A194QVQ1   A0A2W1BRJ2   A0A2A4JGS9   A0A2H1VVH9   + More
A0A1E1W9P3   D6WG02   A0A182UE50   A0A182HPG5   A0A182X101   A0A182QA46   A0A182VNY6   A0A182NLT5   A0A182LB26   Q7QAY7   A0A067QZG9   A0A2M4AKR7   A0A182P5X9   A0A182WM84   A0A1Y1MST2   A0A2M4AIH2   A0A2M4AI64   A0A2M4BJ50   A0A182FMR8   A0A2J7R874   A0A0K8TSS2   A0A182YJ41   A0A182KEI4   W5J9H4   A0A2M4CWY5   Q16HU9   T1E200   A0A1S4G091   A0A0P4W976   T1IBH9   A0A1L8E1D3   A0A1L8E1H4   A0A026WWI2   A0A182RUV0   A0A023F1M6   A0A1B0D404   A0A232F6Z8   A0A2P8XTL8   K7J4Z9   E2C7Z5   E2AZS7   B0WPM2   A0A088A8H1   A0A1Q3F8M1   A0A2A3E1Y9   A0A158NT14   A0A0L7QSD0   A0A195EHF9   A0A195FEQ3   A0A151I3W6   A0A195CBI7   A0A151X6M2   A0A1B6DQQ2   B3MAW1   B4QK27   B4HHT1   A0A0J9RWI7   B4PIG7   B4KVK8   Q9VUH4   B3ND57   A0A1B6KAN6   A0A084WDQ3   U4UTX5   B4LF55   Q20C84   Q8SYS6   A0A2M3ZAJ8   A0A154NYP7   F4WY76   A0A182M6G1   A0A1W4UMP4   A0A182F1M7   A0A0A1WZH1   Q2M170   B4GUJ6   A0A3B0J7E7   W8C2C4   A0A1Q3F8R1   A0A0K8V461   B4J3T6   A0A1S3IVW2   A0A2P2HXG7   A0A0P4W3N6   A0A087UN81   B4NM20   A0A310SQI0   A0A0J7L522   A0A1B0BAT4   A0A1A9Y5W0   A0A1A9US36   A0A1B0GD15   A0A1B0AJE6   A0A3B3CK06  

KEGG

101740839    K00738 alpha-1,3-mannosylglycoprotein beta-1,4-N-acetylglucosaminyltransferase A/B [EC:2.4.1.145] |

PATHWAY

00510    N-Glycan biosynthesis - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0016757   GO:0016021   GO:0016740   GO:0005975   GO:0016020   GO:0016758   GO:0016805   GO:0005524   GO:0048013   GO:0005003   GO:0005887   GO:0007169  

PANTHER

PTHR12062  

Length:

504

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.0743

Exp number, first 60 AAs:

0.00015

Total prob of N-in:

0.05247

outside

1  -  504

 

 

Pi

21.954135

Theta

25.775211

Tajima's D

-0.781522

CLR

0.045555

CSRT

0.182590870456477

Interpretation

Uncertain