Gene

KWMTBOMO00032

Pre Gene Modal

BGIBMGA002306

Annotation

reverse_transcriptase_[Bombyx_mori]

Location

Bomo_Chr1(+):969596-973150      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 2.177

CDS

ATGTTAACAAACGCGGACACGGCTCGTTTAGTTTACTTTAGTTACTTCCACAGTGTCATGTCCTATGGCATTTTGCTATGGGGCAATGCGGCCGATGTAGAAATGATATTTATTCTGCAGAAAAGAGCTATACGTGCTATTTATAACATGCACTCAAGGGAATCCCTGAGGGAGAAATTTAAAGAAATTAAAGTTCTCACTATGCCATCCCAGTACATTTTTGAAAATTTGATATTCGTCGGCAAAATCAGGAGATTGGGCCTCGACGTGGCACTCAGTAAATCCGAGGCCATGTGGTTCCACAGGCCCCTGAGAGTGCCACCTGTCGATGCCCATATCGTGGTTGGAGGCGTCCGGATTGGGGTCGGGGTGCAGTTGAAGTACCTCGGCCTCATTCTGGACAGTCGTTGGACCTTCCGTGCTCACTTTCAGCACCTGGTCCCTCGTGACGCGCCGTCTCTATACGGGGGTGGTGCGATCAATGGCCCTATACGGGGCGCCTGTGTGGGGCCAGTCCCTGGCCGCGGGGTGGCGAAGCTGCTGCAACGGCCGCAACGCACCATCGCGGTCAGGGTCATCCGTGGTTATCGCACCATCTCCTTTGAGGCGGCGTGTGTACTGGCTGGGACGCCACCTTGGGCTCTGGAAGCGGAGGCGCTCGCCGCTGACTATCAGTGGCGGGCTGACCTTCGCGCCCGGGGCGTGGCGTGTCCCAGCCACAGTGTGGTCAGAGCGCGGAGGGCCCAATCTCGGCGGTCCGTGCTGGAGTCATGGTCCAGGCGGCTGGCTGATCCTTCGGCCGGTCGTAGGACCGTCGAGGCGATTCGCCCGGTCCTTGTGGATTGGGTGAATCGTGACAGAGGACGCCTCACTTTCCGGCTCACGCAGGTGCTCACTGGGCATGGTTGCTTCGGTGAGTTCCTGCACCGGATCAGAGCCGAGCCGACGGCAGAGTGCCACCATTGTGATTGCGACTTGGACACGGCAGAGCATACGCTCGTCGCTTGCCCCGCATGGGAGGGGTGGCGCCGTGTCCTCGTCGCAAAAGTAGGAAACGACTTGTCGTTGCCGAGTGTTGTGGCATCGATGCTCGGCGACGACGAGTCGTGGAAGGCGATGCTCGACTTCTGCGAGTGCACCATCTCGCAGAAGGAGGCGGCGGGGCGCGTGAGAGACGCACAATCCCGCCGCCGTCGAGCGGGGGCCAGGGAGGCGGATCTCGCCCAAGCCCTGGCCCTCTAA

Protein

MLTNADTARLVYFSYFHSVMSYGILLWGNAADVEMIFILQKRAIRAIYNMHSRESLREKFKEIKVLTMPSQYIFENLIFVGKIRRLGLDVALSKSEAMWFHRPLRVPPVDAHIVVGGVRIGVGVQLKYLGLILDSRWTFRAHFQHLVPRDAPSLYGGGAINGPIRGACVGPVPGRGVAKLLQRPQRTIAVRVIRGYRTISFEAACVLAGTPPWALEAEALAADYQWRADLRARGVACPSHSVVRARRAQSRRSVLESWSRRLADPSAGRRTVEAIRPVLVDWVNRDRGRLTFRLTQVLTGHGCFGEFLHRIRAEPTAECHHCDCDLDTAEHTLVACPAWEGWRRVLVAKVGNDLSLPSVVASMLGDDESWKAMLDFCECTISQKEAAGRVRDAQSRRRRAGAREADLAQALAL

Uniprot

Q868Q4   A0A2W1B333   Q8MY27   Q8MY33   Q8MY31   Q8MY35   + More
A0A2W1C3J5   A0A0J7N1D9   O01419   A0A0J7N7H9   E2BVR6   A0A0J7MY07   A0A0J7KJH4   A0A0J7KIY5   A0A0J7KLT9   A0A0J7KQK3   A0A0J7JZ13   A0A0J7N7S8   A0A0J7KJG6   A0A0J7JZF7   A0A0J7KJ07   A0A0J7KIW1   A0A3L8DDV9   A0A0J7KIM6   A0A0J7KYD2   A0A0J7KPR0   A0A3L8D2G3   A0A0J7NMN5   A0A0J7KPZ3   A0A3L8DY91   A0A0J7KFG9   A0A0J7KRB8   A0A0J7KWU5   A0A0J7KLH8   A0A0J7K3R6   A0A0J7K3R2   A0A0J7K3F1   A0A0J7N0R3   A0A0J7KMG5   A0A0J7KFH2   A0A0J7NAV8   A0A0J7KF40   A0A0J7KP92   A0A0J7MY17   A0A2S2P557   J9KZ24   J9KNG8  

Pubmed

12644555    28756777    9092665    20798317    30249741   

EMBL

AB090825    BAC57926.1    KZ150386    PZC71062.1    AB078935    BAC06462.1    + More
AB078930    BAC06454.1    AB078931    BAC06456.1    AB078929    BAC06452.1    KZ149896    PZC78733.1    LBMM01012027    KMQ86470.1    D85594    BAA19776.1    LBMM01008861    KMQ88580.1    GL450953    EFN80213.1    LBMM01014132    KMQ85305.1    LBMM01006657    KMQ90417.1    LBMM01006954    KMQ90166.1    LBMM01005733    KMQ91252.1    LBMM01004272    KMQ92618.1    LBMM01019839    KMQ83438.1    LBMM01008682    KMQ88705.1    LBMM01006671    KMQ90407.1    LBMM01019838    KMQ83439.1    LBMM01006662    KMQ90413.1    LBMM01006725    KMQ90373.1    QOIP01000010    RLU18098.1    LBMM01007036    KMQ90099.1    LBMM01002052    KMQ95336.1    LBMM01004634    KMQ92224.1    QOIP01000031    RLU14697.1    LBMM01003245    KMQ93755.1    LBMM01004505    KMQ92346.1    QOIP01000002    RLU25407.1    LBMM01008349    KMQ88951.1    LBMM01003988    KMQ92922.1    LBMM01002480    KMQ94776.1    LBMM01005948    KMQ91066.1    LBMM01015018    KMQ84954.1    LBMM01014956    KMQ84982.1    LBMM01015025    KMQ84953.1    LBMM01012412    KMQ86235.1    LBMM01005465    KMQ91492.1    LBMM01008278    KMQ89009.1    LBMM01007425    KMQ89740.1    LBMM01008422    KMQ88894.1    LBMM01004697    KMQ92167.1    LBMM01014122    KMQ85315.1    GGMR01011974    MBY24593.1    ABLF02006132    ABLF02005203    ABLF02041316   

Proteomes

UP000036403    UP000008237    UP000279307    UP000007819   

PRIDE

Q868Q4    O01419   

Pfam

PF14529   Exo_endo_phos_2        + More
PF00078   RVT_1
PF01553   Acyltransferase
PF03372   Exo_endo_phos
PF00098   zf-CCHC

Interpro

IPR000477   RT_dom        + More
IPR036691   Endo/exonu/phosph_ase_sf       
IPR005135   Endo/exonuclease/phosphatase       
IPR002123   Plipid/glycerol_acylTrfase       
IPR001878   Znf_CCHC       
IPR036875   Znf_CCHC_sf       

SUPFAM

SSF56219   SSF56219        + More
SSF57756   SSF57756       

Gene 3D

3.60.10.10    

ProteinModelPortal

Q868Q4   A0A2W1B333   Q8MY27   Q8MY33   Q8MY31   Q8MY35   + More
A0A2W1C3J5   A0A0J7N1D9   O01419   A0A0J7N7H9   E2BVR6   A0A0J7MY07   A0A0J7KJH4   A0A0J7KIY5   A0A0J7KLT9   A0A0J7KQK3   A0A0J7JZ13   A0A0J7N7S8   A0A0J7KJG6   A0A0J7JZF7   A0A0J7KJ07   A0A0J7KIW1   A0A3L8DDV9   A0A0J7KIM6   A0A0J7KYD2   A0A0J7KPR0   A0A3L8D2G3   A0A0J7NMN5   A0A0J7KPZ3   A0A3L8DY91   A0A0J7KFG9   A0A0J7KRB8   A0A0J7KWU5   A0A0J7KLH8   A0A0J7K3R6   A0A0J7K3R2   A0A0J7K3F1   A0A0J7N0R3   A0A0J7KMG5   A0A0J7KFH2   A0A0J7NAV8   A0A0J7KF40   A0A0J7KP92   A0A0J7MY17   A0A2S2P557   J9KZ24   J9KNG8  

KEGG

100127037    K22984 odorant receptor | (RefSeq) Or-46, BmOr-46, Or46; olfactory receptor 46

GO

GO:0003964   GO:0016746   GO:0016021   GO:0008270   GO:0003676  

Length:

413

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

19.1604799999999

Exp number, first 60 AAs:

18.92435

Total prob of N-in:

0.89402

POSSIBLE N-term signal

sequence

inside

1  -  11

TMhelix

12  -  31

outside

32  -  413

 

 

Pi

21.132105

Theta

20.714519

Tajima's D

-0.444995

CLR

0.084311

CSRT

0.256437178141093

Interpretation

Uncertain