SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00031
Pre Gene Modal
BGIBMGA002047
Annotation
hypothetical_protein_KGM_08807_[Danaus_plexippus]
Transcription factor
Location in the cell
Nuclear   Reliability : 3.712
 

Sequence

CDS
ATGGAAAGATACCTGCGCGAGGAACCCAGGGCGTTGAAGAGGCGCGACGCCCAGGACGAAGACTGGGCTAGGACTCAAACTAAAGCGGGATCGCCAGCCTCGCCTGCGCCCGCAACGCCGGCTTTAGCGCCCACTCCGCAGTCCCCGCCGACTCCGCCCTCGCTGTCGACGCTGCCACAGCTGACGGCGCCTCCATCGCTGCCGGTGCTGGTGTCTCCGCCCACGCCACCCGCGTCGCCGACTCTCGCGCTTATTCCAGCACCACGTCTCTTCACCGTGACTGTTGTAAAGGCGGAGCTAACGCGCGATCCGGAGGAGCCTCGAGTTACTCCAGTTGCTAAAGTCGAGGTACCGATGAAAGTTCCGATGCCGCCGATGGCCGCCCCGGTCCGGCGGGCGCACGCGCCGCGTCTGCCGCACCCGCACGCGGCCGACCCGCGCCGCCGCATCCACCGCTGCGAGTTCCCTTCCTGCGACAAAGTGTACACGAAGAGCTCGCACCTGAAGGCGCACAAGCGCACTCACACCGGCGAGAAGCCGTACAAATGCTCGTGGGAGGGATGCGAGTGGCGTTTCGCGCGCTCGGACGAGCTCACCCGCCACTACCGCAAGCACACCGGGGCGAAGCCCTTCCGCTGCCGGCACTGCGACCGGTGCTTCTCGCGCTCCGACCACCTGGCGCTCCACGCCAAGCGCCACGCGTAG
Protein
MERYLREEPRALKRRDAQDEDWARTQTKAGSPASPAPATPALAPTPQSPPTPPSLSTLPQLTAPPSLPVLVSPPTPPASPTLALIPAPRLFTVTVVKAELTRDPEEPRVTPVAKVEVPMKVPMPPMAAPVRRAHAPRLPHPHAADPRRRIHRCEFPSCDKVYTKSSHLKAHKRTHTGEKPYKCSWEGCEWRFARSDELTRHYRKHTGAKPFRCRHCDRCFSRSDHLALHAKRHA

Summary

Uniprot
Pfam
PF00096   zf-C2H2
Interpro
IPR013087   Znf_C2H2_type        + More
IPR036236   Znf_C2H2_sf       
SUPFAM
SSF57667   SSF57667       
ProteinModelPortal
PDB
2EBT     E-value=2.03816e-30,     Score=327

Ontologies

Topology

Length:
234
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00101
Exp number, first 60 AAs:
0
Total prob of N-in:
0.11065
outside
1  -  234
 
 

Population Genetic Test Statistics

Pi
26.416347
Theta
26.640502
Tajima's D
0.119267
CLR
0.005022
CSRT
0.404829758512074
Interpretation
Uncertain
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