SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00030
Pre Gene Modal
BGIBMGA002050
Annotation
PREDICTED:_dipeptidase_1-like_[Bombyx_mori]
Full name
Dipeptidase      
Location in the cell
Extracellular   Reliability : 1.904
 

Sequence

CDS
ATGAATCGTTGCGACAGACGTTTGGTGGCATGTGCGCTGTTTGCAATCATCGCGGTGGTTGCAGCCGCTTCCTACGATCGCGAACGGCTGGAGATTGCGAAGCAAATCCTGGAGGAGGTCCCACTCATTGACGGGCATAACGATCTGCCATGGAATATCAGAAAATTCCTTCGGAATCAAGTGAACGACTTCGAACTGGACACAGACCTGACCGTGGTGGAGCCCTGGTCTATCTCCAAGTACTCCCACACTGATCTTCCGAGACTGCGAGAGGGCATGGTGGGAGCTCAAGTGAGTATCGCTAACAATCACGTCTCTGACGCAAAATCATATTTGATGAACGCAGTCAATCTTTTTAAGCCGCTTTTTATAAATAACTAG
Protein
MNRCDRRLVACALFAIIAVVAAASYDRERLEIAKQILEEVPLIDGHNDLPWNIRKFLRNQVNDFELDTDLTVVEPWSISKYSHTDLPRLREGMVGAQVSIANNHVSDAKSYLMNAVNLFKPLFINN

Summary

Catalytic Activity
Hydrolysis of dipeptides.
Cofactor
Zn(2+)
Subunit
Homodimer; disulfide-linked.
Similarity
Belongs to the metallo-dependent hydrolases superfamily. Peptidase M19 family.
Feature
chain  Dipeptidase
EC Number
3.4.13.19
Pfam
PF01244   Peptidase_M19
Interpro
IPR008257   Pept_M19        + More
IPR032466   Metal_Hydrolase       
IPR000180   Dipep_AS       
SUPFAM
SSF51556   SSF51556       
PDB
3S2N     E-value=7.96747e-10,     Score=146

Ontologies

Topology

Subcellular location
Membrane  
SignalP
Position:   1 - 23,         Likelihood:  0.884624
 
 
Length:
126
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
18.01291
Exp number, first 60 AAs:
18.0111
Total prob of N-in:
0.97373
POSSIBLE N-term signal
sequence
inside
1  -  6
TMhelix
7  -  25
outside
26  -  126
 
 

Population Genetic Test Statistics

Pi
22.009156
Theta
31.677525
Tajima's D
-0.886157
CLR
0.033144
CSRT
0.160541972901355
Interpretation
Uncertain
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