Gene

KWMTBOMO00029  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA002083

Annotation

beta-actin_[Operophtera_brumata]

Location

Bomo_Chr1(+):714536-719224      View in EpiBrowser

Full name

Actin      

Location in the cell

Cytoplasmic   Reliability : 4.026

CDS

ATGTCTTTTGAAAAACCAGCAGTCGTAATAGATAATGGTAGCTATAACATAAAAGCTGGTTTCGCTTGTGACAATCACCCTGTGTCCATATTCAGAACTGTCGTTGGAAGGCCCGACTATCTACACGGGAGCTATGGGAGACAGTCATATGACGTGTATATTGGGGATGACGCGGTCTCCAAGATCGAAGACTTAGAGCTGAACAAGCCAGTGGAGAAAGGCAGAATTGTTCATTGGGATAACATGGAGCGCATCTGGCATCATGTGTTCTATAAGGAGTTGAAGGTGGCACCCGAGGATAGAGCCGTGGTACTGGCCTGTACAACCACATCACCGATGGAGGAAAAGTTCAAATGCTGTGAGGTCTTTTTTGAGACATTAAATGTCCCAGCTTTGTGTATCCAGCCACAGGCCGTTTTAGCCGTCTACGGCTCTGGTTACACGACTGGGATTTCCGTGGACCTTGGATATGATACTACCGAAGTGACTCCAGTATATCAGGGGGGCAGGATTGAGTACGCTCACACTGAAACGCGTTTGGCTGGCTCTCAGGTGTCTGAGTATTTGAAGTTGCAATTAGAAGAACGAGGCATCGATTTAGGTGTGAATACTGCAACGGTTATCGAGAATATTAAAAGGGACTGTCTTTACGTGACCAAAGACGCTTCGATGACTCGAAGTGATTACGAGAAGTACCACAGAACTGCAGATGGAGATATGGTTCACGTTTGTCGGGAAGCGTTCCTGGCTGCAGAATTGATCTTCCAGCCCGATCTGGTAATGGGTCAGAAGACTGATTTCCTTCCTTTGCCGGACGCAGTGGTGAACGCTGTGCTTGTCTGCGATGCGGAGCTGAGACCGGATTTGTATGACGCTATTGTACTTTGTGGTGGATTAGCGATGATTCCAGGTTTACAAGAGAGATTAGCAATGGAAGTGGAGAACCTAACTCAAACACCAGTTAACGTCATAGGATCTCCTGAAGCATACGCCGTAGCTTGGCTTGGCGGCGCCACTTTCGCTGGTCTCCCAGACGCCAAGAAAATGTGGGTCACGAAAAAGCAGTTCGAGGAATATGGCGAGAAAATTGTCAGGAACAAATTCCTATGA

Protein

MSFEKPAVVIDNGSYNIKAGFACDNHPVSIFRTVVGRPDYLHGSYGRQSYDVYIGDDAVSKIEDLELNKPVEKGRIVHWDNMERIWHHVFYKELKVAPEDRAVVLACTTTSPMEEKFKCCEVFFETLNVPALCIQPQAVLAVYGSGYTTGISVDLGYDTTEVTPVYQGGRIEYAHTETRLAGSQVSEYLKLQLEERGIDLGVNTATVIENIKRDCLYVTKDASMTRSDYEKYHRTADGDMVHVCREAFLAAELIFQPDLVMGQKTDFLPLPDAVVNAVLVCDAELRPDLYDAIVLCGGLAMIPGLQERLAMEVENLTQTPVNVIGSPEAYAVAWLGGATFAGLPDAKKMWVTKKQFEEYGEKIVRNKFL

Similarity

Belongs to the actin family.

Keywords

ATP-binding   Cytoplasm   Cytoskeleton   Nucleotide-binding  

Feature

chain  Actin

Uniprot

H9IXV0   A0A0L7L7G5   A0A212EQF5   A0A2H1W220   A0A2W1C0W3   A0A2A4JQM4   + More
R7U3X6   K1QVI5   A0A250WV43   K1RB50   A0A2T9YPQ8   A0A1R1PIQ4   K1RHB1   A0A140JWN7   A0A1E3QP07   A8JAV1   P53498   L1LE80   K1R557   A0A0F7RLL1   A0A2P6NJB2   A0A084RJF5   A0A084AX40   A0A084QBD5   W6KV94   L7I788   G4NGZ4   L7JLM6   A0A250XHD9   A0A0L0NDJ0   A0A061REG3   C5DX74   S6ED84   A0A1S7HQB1   Q2HWE7   C1KGD6   A0A1Y2X5S0   A0A0G4KDZ0   A0A136J705   A0A194W6I0   A0A1W2TLB6   H9C5T9   A0A194VFF0   A0A2T3A5P5   A0A2P5I5A2   A0A168KDA2   E4UZI4   V5N8J4   A0A0P7B081   C5K5X4   A9CAY2   A0A1V8UMK8   A0A1V8S9Z2   O93786   G2Q7Q5   G2QS28   A0A067XMT9   W3X252   A0A0F7RPK1   M7SBZ6   A0A376B355   A0A1V6RAA2   A0A1V6UZ99   K9FUU1   A0A1V6QAV3   A0A0G4MNA7   A0A0G2HAT5   U1G8Q7   A0A167RZ85   B6HG97   A0A1V1SVW0   A0A1Y2VRZ0   A0A3M2SEK2   A0A2H3HM62   A0A2C8CZZ7   A0A2C8D2V7   A0A0W7VGH2   C7YU15   A0A0B0EAU8   A0A2C8CYQ7   A0A395RV34   A0A366RFD7   G9NFJ6   A0A2C8CYX1   A0A2K0WLQ2   A0A2C8D1I6   A0A2C8CZ26   K3W1C1   A0A1Y2UUX3   R8BBG9   S0DZ82   C9S8X4   A0A1L7VGR4   A0A2L2SRB1   A0A2T3ZB76   A0A086ST21   A0A1Y6D5Q7   A0A0M9EXI2   G4UD84   A0A2C8D0F9  

Pubmed

19121390    26227816    22118469    28756777    23254933    22992520    + More
29764946    17932292    8626057    23137308    29378020    25015739    24516393    22876203    15846337    26215153    19525356    23969048    28510588    28078400    27071652    22951933    28684563    10427696    21964414    25623211    27102219    23723393    28368369    23171342    25059858    18820685    19714214    29649280    21501500    23028337    23825955    21829347    28040774    25291769    21750257   

EMBL

BABH01015635    JTDY01002438    KOB71423.1    AGBW02013269    OWR43716.1    ODYU01005843    + More
SOQ47131.1    KZ149922    PZC77713.1    NWSH01000802    PCG74109.1    AMQN01010709    KB308450    ELT97855.1    JH816363    EKC40887.1    BEGY01000008    GAX74698.1    EKC40884.1    MBFS01002648    PVU94338.1    LSSK01001067    OMH80837.1    EKC40885.1    LC128310    BAU61514.1    KV454432    ODQ79415.1    DS496151    CM008974    EDO98923.1    PNW74319.1    D50839    D50838    ACOU01000002    EKX73468.1    EKC40883.1    AB973305    BAR79440.1    MDYQ01000071    PRP84019.1    KL657772    KFA76340.1    KL648507    KEY69869.1    KL660862    KFA61270.1    HF955092    CCW64792.1    JH793994    ELQ39113.1    CM001236    EHA47504.1    JH794168    ELQ69137.1    BEGY01000081    GAX82491.1    LFRF01000007    KND92054.1    GBEZ01020305    GBEZ01017279    JAC66356.1    JAC69045.1    CU928178    CAR28385.1    HG316468    CDF91887.1    CP019497    CP019505    AQZ15223.1    AQZ19118.1    AB250390    BDGX01000019    BAE79728.1    GAV49880.1    FJ826616    ACO52877.1    KZ112934    OTB16811.1    CVQH01000225    CRJ83716.1    KQ964248    KXJ92968.1    CM003104    KUI71680.1    DF977454    GAP89099.1    JQ238613    AFD50201.1    KN714822    KUI62608.1    KZ678461    PSR83367.1    MAVT02000253    POS77634.1    AZHF01000001    OAA81549.1    DS989826    EFR03514.1    KF569608    AHA84217.1    LKCW01000312    KPM34678.1    GG672080    GG670791    EER17482.1    EER20135.1    D63852    D63853    BAF91213.1    NAEU01000315    OQO24657.1    NAJO01000075    NAJO01000037    OQN95975.1    OQN99929.1    AB003111    BAA74960.1    CP003003    AEO56914.1    CP003009    AEO63418.1    KC145149    AGO59053.1    KI912113    ETS80213.1    AB973307    LSYV01000098    BAR79442.1    KXZ43235.1    KB707569    EMR61667.1    UFAJ01000088    SSD59081.1    MDYO01000009    OQD98475.1    MDDG01000003    OQE43742.1    AKCT01000182    EKV12302.1    MDYN01000008    OQD86102.1    CVQH01023638    CRK35550.1    LCWF01000039    KKY25710.1    KE720921    ERF73842.1    CM002799    KZN86604.1    AM920435    CAP86492.1    BDMC01000004    GAW12728.1    KZ111630    OTA99217.1    NKUJ01000055    RMJ16001.1    NQOC01000001    PCD40744.1    LT906263    SNU76772.1    LT906237    SNU76748.1    MTYH01000142    PNP37606.1    GG698900    EEU44334.1    KN389643    KHE87345.1    LT905536    SNU76100.1    PXOG01000265    RGP63702.1    QKXC01000160    RBR14955.1    ABDG02000013    EHK50711.1    LT906211    SNU76724.1    MTQA01000054    PNP83203.1    LT906159    SNU76676.1    LT906276    SNU76784.1    AFNW01000083    EKJ75640.1    KZ112555    OTA87661.1    KB933326    EON96641.1    HF679025    CCT66702.1    DS985214    EEY14051.1    FJOF01000004    CZR39462.1    LN649232    CEI39451.1    KZ679260    PTB42059.1    JPKY01000279    KFH40253.1    LT841200    SMH63709.1    JXCE01000087    KPA41722.1    GL891107    EGZ75644.1    LT906185    SNU76700.1   

Proteomes

UP000005204    UP000037510    UP000007151    UP000218220    UP000014760    UP000005408    + More
UP000232323    UP000245609    UP000094336    UP000006906    UP000031512    UP000241769    UP000028540    UP000028045    UP000028524    UP000011086    UP000009058    UP000011085    UP000036947    UP000008536    UP000019375    UP000190375    UP000187013    UP000243732    UP000044602    UP000070501    UP000078559    UP000054516    UP000078576    UP000241462    UP000094444    UP000076881    UP000002669    UP000050424    UP000192386    UP000192596    UP000007322    UP000008181    UP000030651    UP000075714    UP000012174    UP000191612    UP000191500    UP000009882    UP000191672    UP000076449    UP000000724    UP000189293    UP000242955    UP000277212    UP000219517    UP000236546    UP000005206    UP000053122    UP000266234    UP000253153    UP000005426    UP000236664    UP000007978    UP000194361    UP000016800    UP000008698    UP000183971    UP000245910    UP000240493    UP000029964    UP000037904    UP000008513   

PRIDE

H9IXV0    K1QVI5    P53498   

Pfam

PF00022   Actin

Interpro

IPR004000   Actin        + More
IPR020902   Actin/actin-like_CS       
IPR004001   Actin_CS       

ProteinModelPortal

H9IXV0   A0A0L7L7G5   A0A212EQF5   A0A2H1W220   A0A2W1C0W3   A0A2A4JQM4   + More
R7U3X6   K1QVI5   A0A250WV43   K1RB50   A0A2T9YPQ8   A0A1R1PIQ4   K1RHB1   A0A140JWN7   A0A1E3QP07   A8JAV1   P53498   L1LE80   K1R557   A0A0F7RLL1   A0A2P6NJB2   A0A084RJF5   A0A084AX40   A0A084QBD5   W6KV94   L7I788   G4NGZ4   L7JLM6   A0A250XHD9   A0A0L0NDJ0   A0A061REG3   C5DX74   S6ED84   A0A1S7HQB1   Q2HWE7   C1KGD6   A0A1Y2X5S0   A0A0G4KDZ0   A0A136J705   A0A194W6I0   A0A1W2TLB6   H9C5T9   A0A194VFF0   A0A2T3A5P5   A0A2P5I5A2   A0A168KDA2   E4UZI4   V5N8J4   A0A0P7B081   C5K5X4   A9CAY2   A0A1V8UMK8   A0A1V8S9Z2   O93786   G2Q7Q5   G2QS28   A0A067XMT9   W3X252   A0A0F7RPK1   M7SBZ6   A0A376B355   A0A1V6RAA2   A0A1V6UZ99   K9FUU1   A0A1V6QAV3   A0A0G4MNA7   A0A0G2HAT5   U1G8Q7   A0A167RZ85   B6HG97   A0A1V1SVW0   A0A1Y2VRZ0   A0A3M2SEK2   A0A2H3HM62   A0A2C8CZZ7   A0A2C8D2V7   A0A0W7VGH2   C7YU15   A0A0B0EAU8   A0A2C8CYQ7   A0A395RV34   A0A366RFD7   G9NFJ6   A0A2C8CYX1   A0A2K0WLQ2   A0A2C8D1I6   A0A2C8CZ26   K3W1C1   A0A1Y2UUX3   R8BBG9   S0DZ82   C9S8X4   A0A1L7VGR4   A0A2L2SRB1   A0A2T3ZB76   A0A086ST21   A0A1Y6D5Q7   A0A0M9EXI2   G4UD84   A0A2C8D0F9  

PDB

1YVN     E-value=9.31458e-66,     Score=635

KEGG

101742910    no KO assigned | (RefSeq) actin-85C-like

GO

GO:0005524   GO:0036156   GO:0042802   GO:0000812   GO:0001300   GO:0035267   GO:0032432   GO:0006281   GO:0030010   GO:0005884   GO:0005200   GO:0000142   GO:0030476   GO:0006897   GO:0009306   GO:0004402   GO:0000916   GO:0000011   GO:0031011   GO:0034599   GO:0030479  

PANTHER

PTHR11937  

Subcellular location

  

Length:

369

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.21952

Exp number, first 60 AAs:

0.0006

Total prob of N-in:

0.00687

outside

1  -  369

 

 

Pi

25.816099

Theta

26.818852

Tajima's D

-0.510399

CLR

0.01089

CSRT

0.244887755612219

Interpretation

Uncertain