SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00020
Annotation
PREDICTED:_selenoprotein_K-like_[Papilio_polytes]
Location in the cell
Extracellular   Reliability : 1.132 Mitochondrial   Reliability : 1.104 Nuclear   Reliability : 1.406
 

Sequence

CDS
ATGGTTTACGTTACAGGAGATGGGACTATTGTGGAGAAGACTCCTTTCAGTTTCATGGGCTGGTTCTGGGCCTTGCTGAACTTCTTCTCATTGTTGTTCCACACCCTGATAGATTCTAACTATAATAAACATGGCAAAAAATACACAAGGGATTTCAGACCACCAGGAAGTGGGCCTCCTAAACCACCAACCAAAAAGTTTGGGGGCTTTGGTCCATCTGGCTCTGGGCCCTCACCACCACCTATGGGAGGCTGCGGCTGTGGTGGATAA
Protein
MVYVTGDGTIVEKTPFSFMGWFWALLNFFSLLFHTLIDSNYNKHGKKYTRDFRPPGSGPPKPPTKKFGGFGPSGSGPSPPPMGGCGCGG

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

Length:
89
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
21.96249
Exp number, first 60 AAs:
21.96249
Total prob of N-in:
0.01781
POSSIBLE N-term signal
sequence
outside
1  -  14
TMhelix
15  -  37
inside
38  -  89
 
 

Population Genetic Test Statistics

Pi
14.510262
Theta
19.548299
Tajima's D
-0.768806
CLR
0
CSRT
0.179041047947603
Interpretation
Uncertain
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