SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00019  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA002077
Annotation
PREDICTED:_tan_protein_isoform_X1_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.47
 

Sequence

CDS
ATGAAACTATTGAATTACGGCGGAGTTGTTGCTATATTTTTAAGTTTATTCGGTACGGCAGTATGTGAGATACAACTCGGGAGACGCCATGCGGTCCCTGTTATATACGTAAGAGGCTCCCATTATGAAGTCGGCTTCGATGTGGGTCGCACATTCTCCTCCATCATCAAGAGCTTCATATCAAATTACGCTAATCTACGTGACTTTGAGCGCGAATACAAAACTGATACTGGCCGGAATGCGTACGATAAGACCCTGGCTAACATGGAGAAGCGATTCCCTTACTACGTTAAGGAGATCAGGGGTGTTGCTGATGGAGCTAACGTTCCTTTCTATCAGCTATTCCTCCTGCAAATGGATGACTTGATTGGAACCATCAACGACAACCACGTCCCACGGAACGACACCGGAGGCTGCAGTTCTGTCGCCTTCAAGAACCCACAACATACTATACTTGGACACACAGAGGATGCATTTACCGAAACCCTAAATCACTTCTACATTATGTCGGCGCACATCATTCCAACTCCCGAAGACAGGGAGCACGGGGCAGTAGAGGAACGGTTCTCGTCTTTATGCTACGCTGGTCACATGCCCGGGTACACCATGGGCTACAATGAAAACGGAATGGTGTTTTCCATCAACACGCTCAGCCCACTTCTGCTAAAGCCTGGAAACACTCCTCGCACATTTATAACCAGAAAGCTTCTGTCCGCCAAGAGTTTCCCGGATGCGGAACGGATCCTCCGTGACGAAGGCCTAGGAATCGGCAACGGTTTTTCGGTAAATATGATTTGGACAGACACCTGGGGGGATACCAAGCTTTACAATGTGGAAGTCGCCCCCGACCTCAAGGGAGACCGCTCGCTCGTCCACGTTCAGAAATACGACCAGGACACACTAGTACACTGTAATATTTACAACCGCATTAACGTGATTGAAGTGATTGGCGAAATAGTTGGCAGTAGCAAGTCCCGACTGAAGGCGATACACGCTCATGCTGCCCCCAAGACCAGAGGTGATATAGCTGAGATACTCTCTGATGTCACCGGCAAAGACTTCCAAGTGTTCTCGATGCAGAAGGACGCTATTATCAAGACCATCGCTGCTGGTATATTCGACGTAGAAAAAAGAACGTGGAGTATTTATATCGACAAACCCAGCATTTCGGAGCCCGTTGCAGTGCTGCCCATCAGATTCTCCGAGCTCGAGTCTAATAAATAA
Protein
MKLLNYGGVVAIFLSLFGTAVCEIQLGRRHAVPVIYVRGSHYEVGFDVGRTFSSIIKSFISNYANLRDFEREYKTDTGRNAYDKTLANMEKRFPYYVKEIRGVADGANVPFYQLFLLQMDDLIGTINDNHVPRNDTGGCSSVAFKNPQHTILGHTEDAFTETLNHFYIMSAHIIPTPEDREHGAVEERFSSLCYAGHMPGYTMGYNENGMVFSINTLSPLLLKPGNTPRTFITRKLLSAKSFPDAERILRDEGLGIGNGFSVNMIWTDTWGDTKLYNVEVAPDLKGDRSLVHVQKYDQDTLVHCNIYNRINVIEVIGEIVGSSKSRLKAIHAHAAPKTRGDIAEILSDVTGKDFQVFSMQKDAIIKTIAAGIFDVEKRTWSIYIDKPSISEPVAVLPIRFSELESNK

Summary

EMBL
AB499125    BAI87831.1    BABH01015619    BABH01015620    GU386341    ADU32897.1    + More
KP657627    AKL78852.1    AGBW02014676    OWR41220.1    GAIX01005868    JAA86692.1    NWSH01001255    PCG71964.1    ODYU01011053    SOQ56545.1    AB531134    BAJ07601.1    AB531132    BAJ07599.1    KQ460953    KPJ10340.1    AB499122    BAI87828.1    KQ459599    KPI94340.1    GU953228    ADF43212.1    KC996755    AGT62465.1    AAZX01000808    NNAY01000336    OXU29117.1    KK107770    EZA47863.1    KY221866    ATB56364.1    KQ971321    EFA00578.1    GL443059    EFN62652.1    KQ414758    KOC61454.1    GANO01004998    JAB54873.1    UFQS01000373    UFQT01000373    SSX03289.1    SSX23656.1    GBYB01000747    JAG70514.1    CVRI01000004    CRK87323.1    NEVH01021191    PNF20124.1    PNF20122.1    KZ288403    PBC26195.1    CH477242    EAT46346.1    EAT46345.1    GFDL01008244    JAV26801.1    KQ434783    KZC04743.1    AXCM01015971    GAPW01001947    JAC11651.1    DS231955    EDS28928.1    KQ978957    KYN27247.1    KQ435724    KOX78492.1    ADTU01016076    ADTU01016077    ADTU01016078    KQ976725    KYM76577.1    KQ982813    KYQ50292.1    GL453666    EFN75755.1    KQ981636    KYN38816.1    ADMH02000949    ETN64592.1    APGK01041353    KB740993    ENN76034.1    KQ978501    KYM93584.1    GGFK01000999    MBW34320.1    GEDC01019220    GEDC01013169    GEDC01011804    GEDC01005456    JAS18078.1    JAS24129.1    JAS25494.1    JAS31842.1    GL766213    EFZ15450.1    GGFJ01006311    MBW55452.1    AAAB01008846    EAA06499.3    GL888609    EGI59102.1    GEDC01025339    GEDC01013267    JAS11959.1    JAS24031.1    GEZM01062088    JAV70045.1    GGFM01003570    MBW24321.1    GEBQ01015173    JAT24804.1    GDHF01011894    JAI40420.1    GFDF01009917    JAV04167.1    KA647276    AFP61905.1    AXCN02001385    GAKP01016529    JAC42423.1    GAKP01016528    JAC42424.1    GBXI01014992    JAC99299.1    GAMC01010705    JAB95850.1    APCN01004096    AJWK01020382    AJWK01020383    AJWK01020384    AJWK01020385    AJWK01020386    AXCP01008174    JRES01000302    KNC32552.1    GFDG01000633    JAV18166.1    GFDG01000634    JAV18165.1    ATLV01023287    KE525342    KFB48815.1    CVRI01000051    CRK99553.1    DS235832    EEB18069.1    JXUM01044516    JXUM01044517    KQ561404    KXJ78689.1    GQ457340    ACV86748.1    GQ457346    ACV86754.1    GQ457338    GQ457339    GQ457347    ACV86746.1    ACV86747.1    ACV86755.1    CH940664    EDW63056.1    GQ457336    ACV86744.1    CH916370    EDV99828.1    GQ457348    ACV86756.1    GQ457350    ACV86758.1    GQ457341    GQ457342    GQ457343    GQ457349    ACV86749.1    ACV86750.1    ACV86751.1    ACV86757.1    GQ457337    GQ457351    GQ457353    ACV86745.1    ACV86759.1    ACV86761.1    AE014298    AY128492    GU144522    AAF46466.1    AAM75085.1    ACZ36950.1    AHN59513.1    GQ457344    ACV86752.1   
Pfam
PF03417   AAT
Interpro
IPR005079   Peptidase_C45       
PDB
2X1E     E-value=0.000185049,     Score=106

Ontologies

Topology

SignalP
Position:   1 - 22,         Likelihood:  0.936115
 
 
Length:
407
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
16.4904299999999
Exp number, first 60 AAs:
16.46908
Total prob of N-in:
0.75212
POSSIBLE N-term signal
sequence
inside
1  -  4
TMhelix
5  -  27
outside
28  -  407
 
 

Population Genetic Test Statistics

Pi
28.830895
Theta
25.222795
Tajima's D
0.195858
CLR
0.040738
CSRT
0.431328433578321
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
24402669 TQTIDFSIHIGKK 95.83 7e-10
25044914 TWSFDPDQVK 95.24 1e-08
24402669 TWKIDADSEIAGVPPIHTDGPGEAGPYVK 95.24 1e-08
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