SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00015
Pre Gene Modal
BGIBMGA002059
Annotation
PREDICTED:_proline-?_glutamic_acid-_and_leucine-rich_protein_1-like_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.242
 

Sequence

CDS
ATGTCTGAAAATCAAGAGGAGCCATGCACATCATCAAGTAATCCAGCGAATAATGGAAAGGAAGAGAAAGAGCAAGGTGGGGAAAACCGTCCTCCAAACAATTCTGATAGTGACAGAGTGGTCGTAGGTGTATTAACAATGCCACTTAAAAAAAGTCAATCATCATCTAAGACTGAGACTATGGAGGCTGATACTACAGGCATCACCTTAGAGACCACCTCCAATGAAAACTCTCAAAATACTGATGACCAAGAGCAGGCTGGTGAAAATGATGAAAGTGGTCAAAATGATGAGGCTTCTCAAAATGCCGACAGTCCCCGAAATGATGAGGGTCCTAAAAATGATGCTGAAGAAACATCAAATGATGAAAGTAGCACGTCCAGTGAATCCAGCGACGATGCTGACAAGAGTCGCGAGAGAGAAGCATCACCCGAGCATGATGACAGTCAGCCAGAAGATTTGGCCATAGAAACTTCTGAATCCGATTTTCATGCATACTGGCGTCGTGCAGATCATATCCAGTTGCCTCCACAACTACCACCAACTGTAGATCCGGAAATTATTGACGTCGACGCCTACGCTGAAAGGGTTGAACGTGAAGCACGGCAGCGCCCAATAGAACTCAGACGCGAACCGGACGTGAGCCCCCCTCCCATGGTCAATGAAGAGCGTCAGGAGCCCATGAACCTGGTCCGCCCGTCTCAGGCACAGCCGCCGAGGGCTATGGAGGGTCGATCAAATGGACATGTACCCGTTGTGAATATGCCGAAAAGGCGCCGCTTCAATTATGATGCACACTCCCGCTACGTCGAGGACAGGTTTCCCACAAATCGGCGAGTGGCGCCGGAACCCGTACCTCTTAATCTTCATGGACCCCGCGGCTCGCGTCTACACAGCCCACAAGGACATCCCAACGAAATCTTTCACAGCCCGCCAAGACCAATTGGCAATCTTAGGATGGGCGAAGGAGAGAGATACCAATCCCCCTTTCCTATCGTACGTGGCAGATCACAGTGA
Protein
MSENQEEPCTSSSNPANNGKEEKEQGGENRPPNNSDSDRVVVGVLTMPLKKSQSSSKTETMEADTTGITLETTSNENSQNTDDQEQAGENDESGQNDEASQNADSPRNDEGPKNDAEETSNDESSTSSESSDDADKSREREASPEHDDSQPEDLAIETSESDFHAYWRRADHIQLPPQLPPTVDPEIIDVDAYAERVEREARQRPIELRREPDVSPPPMVNEERQEPMNLVRPSQAQPPRAMEGRSNGHVPVVNMPKRRRFNYDAHSRYVEDRFPTNRRVAPEPVPLNLHGPRGSRLHSPQGHPNEIFHSPPRPIGNLRMGEGERYQSPFPIVRGRSQ

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

Length:
338
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.02353
outside
1  -  338
 
 

Population Genetic Test Statistics

Pi
2.099886
Theta
3.678373
Tajima's D
-1.194008
CLR
0.028674
CSRT
0.0981450927453627
Interpretation
Possibly Positive selection
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