Gene

KWMTBOMO00011

Pre Gene Modal

BGIBMGA002076

Annotation

PREDICTED:_SET_and_MYND_domain-containing_protein_4_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr1(+):362976-389260      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 1.999

CDS

ATGTCTCGAATTTACGAAGAAGTGGATCCCATATACGCTGCGACCTGTAGCGACATCACTCTTTGCTCAAATTCCAAAGGTTTCTTCAAGGGTCTCGCCGATGACCTGGTTTCATTAGCTGGGGAAGAATGGCTAAATAAATTTGAGCTAGTGGAAGATGGCAAGAAAGTTACATTTTTTATGGAGAATAAGGAGGTAATGGAAGCACTTACTGAAGTATTATCCAGGATACAGCCCCTTCACCGCGGGAAAGACGCTAGAATATCGAGTCAGAGGCGCGGCGACGCACAATCGGCTCTGAAGAATGAAGATCTAATGAAGGCGTTGGCGTTGGCAAGTCAAGCCGTACTCAGGGCTCCCGTTACGGGAGAAAATGAAGCGATTGACGGCGGGGTGTCGCTGGCTTTGGCGCTGTGGCTTCGGTCTGAGATCCTGCTGAAATTAAATAGACCTCAAGCCGCCCTAGAAGATTTGAAGTTAGCTCTAAAGGAACGCCTACCTGCCAGAATGCGAGCCCACTACTACTGGAGAATGGGACACTGCTACCGAGGTACCGGAGAGGCTACAAGAGCGAAGGTGTCGTATGAACTGGCCGGCCGACTGCTCGCTAAGGACGAGGTCGCCAAAACACAGCTAACTAAAGACATTGAAACTCTAGATTATACAGTACAATCGAAACGGCCGCCCGATAAGAATGCCACCACACTAACCGGAGGAGCGAAATTAAACTTGCCATCTTTATCGAAACTACTGAAAATAGTAGAAGAAGAGAACAAGGGTCGCTTCGCCGTGGCCAGTGCTCCGGTTCGAACGGGAGACGTCCTGCTGGTTGACAGTCCGTACGCAGCCTGCCTGCTCTCGGATTACTACGGAACGCACTGCCTTCATTGTTTCAGAAGGTTGGCGGACTGCGAAGAGTCGGCCCCGGTGTGGTGTCCCAAATGCTCAGGCGTTGTGTTCTGTAGTATCGAATGTCGCGATACTGCGGTTTCTTCGTATCACTCCTTTGAGTGCCAGTTCCTAGATCTATTTGTGGGTTCCGGAATGTCCATCCTGAGTCACATTGCTCTCAGAATGGTGACACAATCAGATCTCGAAACGTGTCTGACAATCCACTCAAAGTACATCTCCAATGACATTAAAACCGTTGAAGGGAGCGTGCTTAACGACATCGAAGGCGTTGCCAAAAAATCTAAAATGAAAAGTAGAAAAGAGAGACTGAATAGAAATAAGAAAAGCCATAAGATGTCTGTAGAGAAGAATGATAGAGTTGACGTAATGGAAGATAAACTGGAAGACAAAAATAATTTTGAAGAGAAGTTAGAATTGAAAGCGGCGCAAGTTTACTCTCTCTGTACACACTCTGACCGGAGAAGGGGTGATGATTACTTGAAGAGGATAGTGATGGGCTATTTCCTGACAGAATGCCTGAAGCACGCTGGATTTTTCAAAAACTGCAATAAAAATAATTTGACTAAAGCGCAACAGTCCATATGTGAACTGATAGTTCGCAACCTGCAGTTGTTACAATTCAACGCACACGAAATTTACGAGACCGTGCGAGGAGAGCACCAGTTCAGCGGGTCCAAGCCGCTCTATTTCGCTGTGGGGATCTACCCTGTCGGAGCACTCTTCAACCACGAGTGCTACCCCGCGGTCACCAGATATTTTGAGGGTCGTAAGATCGTCCTACGCGCAACGAGACCCCTGACTCCCGGAGAAGTGGTCTCCGAAAATTACGGACCGCACTTCATGATGCGGACCCTGAGGGAAAGGCAGCGAGCCCTCGCCTGCCGGTACTGGTTCCACTGTGAATGTACCGCTTGTAAGGAAGACTGGCCAACTATGAAGCAGATGAATAACGATTCTATTTCTTACATAAGATGTTCTAACCTCGCCTGCCGAGGTAAGCTCCGAGGGAGTGTCCAGCGGATGGGTGATCGATGCAGCCTATGCTCTACCCCTATAGACAAGGATCTAGTAACAGTTAAAATTGACACGATCAATAAATGCACGGCTCAGTATCAGGAAGGCGCCAAGTTAATGGACAAAGAGATGCCAGAAGAAGCCACCGCGACACTGTGCAGTGCTATAGACTCGTTTCACGAGGCAGGCCGGCCTCCTCACCTTGAAACGCACTTAGCCCAAGAAGCCTTAAGATCATGTTTTGCAGTACGTGGAAACATTCACATCCTGAAGAAGGATGGCGAAAAAGACAACGAAAACAAGTAA

Protein

MSRIYEEVDPIYAATCSDITLCSNSKGFFKGLADDLVSLAGEEWLNKFELVEDGKKVTFFMENKEVMEALTEVLSRIQPLHRGKDARISSQRRGDAQSALKNEDLMKALALASQAVLRAPVTGENEAIDGGVSLALALWLRSEILLKLNRPQAALEDLKLALKERLPARMRAHYYWRMGHCYRGTGEATRAKVSYELAGRLLAKDEVAKTQLTKDIETLDYTVQSKRPPDKNATTLTGGAKLNLPSLSKLLKIVEEENKGRFAVASAPVRTGDVLLVDSPYAACLLSDYYGTHCLHCFRRLADCEESAPVWCPKCSGVVFCSIECRDTAVSSYHSFECQFLDLFVGSGMSILSHIALRMVTQSDLETCLTIHSKYISNDIKTVEGSVLNDIEGVAKKSKMKSRKERLNRNKKSHKMSVEKNDRVDVMEDKLEDKNNFEEKLELKAAQVYSLCTHSDRRRGDDYLKRIVMGYFLTECLKHAGFFKNCNKNNLTKAQQSICELIVRNLQLLQFNAHEIYETVRGEHQFSGSKPLYFAVGIYPVGALFNHECYPAVTRYFEGRKIVLRATRPLTPGEVVSENYGPHFMMRTLRERQRALACRYWFHCECTACKEDWPTMKQMNNDSISYIRCSNLACRGKLRGSVQRMGDRCSLCSTPIDKDLVTVKIDTINKCTAQYQEGAKLMDKEMPEEATATLCSAIDSFHEAGRPPHLETHLAQEALRSCFAVRGNIHILKKDGEKDNENK

Similarity

Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.

Uniprot

H9IXU3   A0A2A4JBJ6   A0A212EIB3   A0A194QXS2   A0A194PLY3   A0A2P8YCF3   + More
A0A088ARS2   A0A3L8DG49   A0A158NS58   A0A336KP35   A0A0C9Q6Y6   A0A336MH96   E0VRD3   A0A154PBQ3   A0A1B6DV01   A0A1B6DJ26   A0A067R1I2   A0A0P6JC10   A0A0N7ZM19   A0A026WYK2   A0A1J1J3W6   A0A0L7RDH1   A0A195BZ02   A0A0N8BLB7   A0A0P4YU54   A0A0P5K0D5   A0A0N8BSQ5   A0A0P6H8T4   A0A0P4W687   A0A0P4W8Y7   A0A023F0G4   Q0IG30   A0A1S4F4X7   A0A0K2TLD8   J9JK42   E9I266   A0A1B6CWC9   A0A0P5ZB00   A0A0N8B7W5   B0X7W3   A0A0P5AZF7   A0A0P6BIH0   A0A0P5XZ86   A0A0P6GEJ2   A0A0P5NTU3   A0A0P5HLE6   A0A0P5S7Y6   A0A0P5NL24   A0A0P5S3C9  

Pubmed

19121390    22118469    26354079    29403074    30249741    21347285    + More
20566863    24845553    24508170    25474469    17510324    21292972   

EMBL

BABH01015606    BABH01015607    NWSH01002090    PCG69219.1    AGBW02014676    OWR41217.1    + More
KQ460953    KPJ10338.1    KQ459599    KPI94337.1    PYGN01000705    PSN41945.1    QOIP01000008    RLU19281.1    ADTU01024480    ADTU01024481    ADTU01024482    ADTU01024483    ADTU01024484    ADTU01024485    UFQS01000586    UFQT01000586    SSX05155.1    SSX25516.1    GBYB01009883    JAG79650.1    UFQT01000990    SSX28319.1    DS235465    EEB15939.1    KQ434856    KZC08688.1    GEDC01007782    JAS29516.1    GEDC01011594    JAS25704.1    KK853097    KDR11443.1    GDIQ01009517    JAN85220.1    GDIP01232185    JAI91216.1    KK107064    EZA60928.1    CVRI01000067    CRL06484.1    KQ414614    KOC68811.1    KQ978457    KYM93842.1    GDIQ01166523    JAK85202.1    GDIP01233322    JAI90079.1    GDIQ01190994    JAK60731.1    GDIQ01148619    JAL03107.1    GDIQ01035071    JAN59666.1    GDRN01080085    JAI62291.1    GDRN01080086    GDRN01080084    GDRN01080083    JAI62293.1    GBBI01003755    JAC14957.1    CH477274    EAT45183.1    HACA01009497    CDW26858.1    ABLF02026503    GL733993    EFX61914.1    GEDC01019561    JAS17737.1    GDIP01047248    JAM56467.1    GDIQ01204139    JAK47586.1    DS232465    EDS42182.1    GDIP01192235    JAJ31167.1    GDIP01014570    JAM89145.1    GDIP01065300    JAM38415.1    GDIQ01044758    JAN49979.1    GDIQ01148031    JAL03695.1    GDIQ01231737    JAK19988.1    GDIQ01091286    JAL60440.1    GDIQ01147980    JAL03746.1    GDIQ01093574    JAL58152.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053240    UP000053268    UP000245037    + More
UP000005203    UP000279307    UP000005205    UP000009046    UP000076502    UP000027135    UP000053097    UP000183832    UP000053825    UP000078542    UP000008820    UP000007819    UP000000305    UP000002320   

PRIDE

H9IXU3   

Pfam

PF00856   SET        + More
PF16214   AC_N
PF06327   DUF1053
PF00211   Guanylate_cyc
PF01753   zf-MYND

Interpro

IPR001214   SET_dom        + More
IPR011990   TPR-like_helical_dom_sf       
IPR019734   TPR_repeat       
IPR018297   A/G_cyclase_CS       
IPR029787   Nucleotide_cyclase       
IPR032628   AC_N       
IPR001054   A/G_cyclase       
IPR009398   Adcy_conserved_dom       
IPR002893   Znf_MYND       
IPR013026   TPR-contain_dom       
IPR013087   Znf_C2H2_type       

SUPFAM

SSF48452   SSF48452        + More
SSF55073   SSF55073       

Gene 3D

1.25.40.10     3.30.70.1230    

ProteinModelPortal

H9IXU3   A0A2A4JBJ6   A0A212EIB3   A0A194QXS2   A0A194PLY3   A0A2P8YCF3   + More
A0A088ARS2   A0A3L8DG49   A0A158NS58   A0A336KP35   A0A0C9Q6Y6   A0A336MH96   E0VRD3   A0A154PBQ3   A0A1B6DV01   A0A1B6DJ26   A0A067R1I2   A0A0P6JC10   A0A0N7ZM19   A0A026WYK2   A0A1J1J3W6   A0A0L7RDH1   A0A195BZ02   A0A0N8BLB7   A0A0P4YU54   A0A0P5K0D5   A0A0N8BSQ5   A0A0P6H8T4   A0A0P4W687   A0A0P4W8Y7   A0A023F0G4   Q0IG30   A0A1S4F4X7   A0A0K2TLD8   J9JK42   E9I266   A0A1B6CWC9   A0A0P5ZB00   A0A0N8B7W5   B0X7W3   A0A0P5AZF7   A0A0P6BIH0   A0A0P5XZ86   A0A0P6GEJ2   A0A0P5NTU3   A0A0P5HLE6   A0A0P5S7Y6   A0A0P5NL24   A0A0P5S3C9  

PDB

3OXG     E-value=1.49629e-06,     Score=127

KEGG

101741740    no KO assigned | (RefSeq) SET and MYND domain-containing protein 4

GO

GO:0004016   GO:0000166   GO:0035556   GO:0006171   GO:0016021   GO:0005886   GO:0046872   GO:0008168   GO:0003676   GO:0005515   GO:0016849   GO:0005215   GO:0006810  

Length:

743

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.04909

Exp number, first 60 AAs:

0.00019

Total prob of N-in:

0.00027

outside

1  -  743

 

 

Pi

23.560094

Theta

20.88344

Tajima's D

-1.903412

CLR

0.015593

CSRT

0.0184990750462477

Interpretation

Uncertain