SGID Silkworm Genome Informatics Database
Repeat Element Family chromosome Strand Start End
(CAT)n Simple_repeat Bomo_Chr1 + 542953 542979
AT_rich Low_complexity Bomo_Chr1 + 543128 543186
BM1 SINE/tRNA Bomo_Chr1 + 544641 544864
BM1 SINE/tRNA Bomo_Chr1 + 545232 545487
AT_rich Low_complexity Bomo_Chr1 + 545887 545909
AT_rich Low_complexity Bomo_Chr1 + 548590 548614
Mariner-3_BM DNA/TcMar-Mariner Bomo_Chr1 + 549473 549572
Mariner-3_BM DNA/TcMar-Mariner Bomo_Chr1 + 549568 549723
AT_rich Low_complexity Bomo_Chr1 + 550641 550666
AT_rich Low_complexity Bomo_Chr1 + 551153 551195
L1B_BM LINE/Jockey Bomo_Chr1 + 551527 551664
BM2A LINE/Jockey? Bomo_Chr1 + 551532 551684
AT_rich Low_complexity Bomo_Chr1 + 553629 553681
BM1 SINE/tRNA Bomo_Chr1 - 553812 553946
MAG LTR/Gypsy Bomo_Chr1 - 556849 557137
MAG LTR/Gypsy Bomo_Chr1 - 557572 557982
BM1 SINE/tRNA Bomo_Chr1 - 561641 562075
AT_rich Low_complexity Bomo_Chr1 + 562076 562117
KAMIKAZE_BM LTR/Pao Bomo_Chr1 - 562998 563170
Sake2_BM LINE/L2 Bomo_Chr1 + 563363 563762
BM1 SINE/tRNA Bomo_Chr1 + 571049 571180
AT_rich Low_complexity Bomo_Chr1 + 572623 572662
Sola1-2_BM DNA/Sola Bomo_Chr1 - 572887 573086
Sola1-2_BM DNA/Sola Bomo_Chr1 - 573097 573129
AT_rich Low_complexity Bomo_Chr1 + 573696 573729
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