SGID Silkworm Genome Informatics Database
Repeat Element Family chromosome Strand Start End
Gypsy-5_BM-I-int LTR/Gypsy Bomo_Chr1 - 2187152 2190819
Sake2_BM LINE/L2 Bomo_Chr1 - 2191753 2192113
LINE1_BM LINE/Jockey Bomo_Chr1 - 2193305 2193585
BM1 SINE/tRNA Bomo_Chr1 - 2193792 2194033
RTE-1_BM LINE/RTE-BovB Bomo_Chr1 - 2194044 2194138
BM1 SINE/tRNA Bomo_Chr1 - 2195380 2195756
Helitron-1_BM RC/Helitron Bomo_Chr1 + 2198508 2198814
Mariner-1_BM DNA/TcMar-Mariner Bomo_Chr1 + 2199557 2199959
AT_rich Low_complexity Bomo_Chr1 + 2200089 2200188
BM1 SINE/tRNA Bomo_Chr1 + 2200325 2200580
BM1 SINE/tRNA Bomo_Chr1 - 2201358 2201611
Helitron-1_BM RC/Helitron Bomo_Chr1 + 2202531 2202829
BM1 SINE/tRNA Bomo_Chr1 - 2203409 2203666
AT_rich Low_complexity Bomo_Chr1 + 2204599 2204629
AT_rich Low_complexity Bomo_Chr1 + 2204915 2205028
AT_rich Low_complexity Bomo_Chr1 + 2206929 2206952
CR1-1_BM LINE/CR1 Bomo_Chr1 - 2207337 2207906
BM1 SINE/tRNA Bomo_Chr1 - 2208388 2208580
BM1 SINE/tRNA Bomo_Chr1 + 2208951 2209392
RTE-3_BM LINE/RTE-BovB Bomo_Chr1 - 2209694 2209961
(TC)n Simple_repeat Bomo_Chr1 + 2212728 2212806
BM1 SINE/tRNA Bomo_Chr1 - 2213373 2213461
BM1 SINE/tRNA Bomo_Chr1 - 2214545 2214921
Helitron-1_BM RC/Helitron Bomo_Chr1 + 2217673 2217979
Mariner-1_BM DNA/TcMar-Mariner Bomo_Chr1 + 2218722 2219123
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